Protein–RNA interactions for Protein: Q14994

NR1I3, Nuclear receptor subfamily 1 group I member 3, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3Q14994 EIF4A1P11-201ENST00000451239 222 ntBASIC4.38□□□□□ -1.71
NR1I3Q14994 RNU7-187P-201ENST00000458985 68 ntBASIC4.38□□□□□ -1.71
NR1I3Q14994 AC026979.1-201ENST00000492525 396 ntBASIC4.38□□□□□ -1.71
NR1I3Q14994 AC009901.1-201ENST00000506703 541 ntBASIC4.38□□□□□ -1.71
NR1I3Q14994 VWA8P1-201ENST00000510889 176 ntBASIC4.38□□□□□ -1.71
NR1I3Q14994 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.38□□□□□ -1.71
NR1I3Q14994 CYCSP27-201ENST00000527643 293 ntBASIC4.38□□□□□ -1.71
NR1I3Q14994 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.38□□□□□ -1.71
NR1I3Q14994 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.38□□□□□ -1.71
NR1I3Q14994 HSBP1P1-201ENST00000555205 166 ntBASIC4.38□□□□□ -1.71
NR1I3Q14994 AC078938.1-201ENST00000620993 318 ntBASIC4.38□□□□□ -1.71
NR1I3Q14994 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
NR1I3Q14994 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NR1I3Q14994 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NR1I3Q14994 Z82217.1-201ENST00000625157 8149 ntBASIC4.38□□□□□ -1.71
NR1I3Q14994 NCAPGP1-201ENST00000505112 1814 ntBASIC4.37□□□□□ -1.71
NR1I3Q14994 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NR1I3Q14994 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NR1I3Q14994 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
NR1I3Q14994 Y_RNA.151-201ENST00000363566 112 ntBASIC4.37□□□□□ -1.71
NR1I3Q14994 Y_RNA.210-201ENST00000364161 110 ntBASIC4.37□□□□□ -1.71
NR1I3Q14994 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.37□□□□□ -1.71
NR1I3Q14994 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.37□□□□□ -1.71
NR1I3Q14994 AL732292.1-201ENST00000426692 226 ntBASIC4.37□□□□□ -1.71
NR1I3Q14994 AL158071.1-201ENST00000430315 461 ntBASIC4.37□□□□□ -1.71
NR1I3Q14994 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.37□□□□□ -1.71
NR1I3Q14994 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.37□□□□□ -1.71
NR1I3Q14994 HMGB1P37-201ENST00000439613 609 ntBASIC4.37□□□□□ -1.71
NR1I3Q14994 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NR1I3Q14994 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.37□□□□□ -1.71
NR1I3Q14994 DYNLT3P2-201ENST00000442517 295 ntBASIC4.37□□□□□ -1.71
NR1I3Q14994 NOTCH2P1-201ENST00000443481 624 ntBASIC4.37□□□□□ -1.71
NR1I3Q14994 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.37□□□□□ -1.71
NR1I3Q14994 FTH1P25-201ENST00000447665 469 ntBASIC4.37□□□□□ -1.71
NR1I3Q14994 AC068781.1-201ENST00000488231 618 ntBASIC4.37□□□□□ -1.71
NR1I3Q14994 RPL22P13-201ENST00000493291 347 ntBASIC4.37□□□□□ -1.71
NR1I3Q14994 AC114801.2-201ENST00000503825 781 ntBASIC4.37□□□□□ -1.71
NR1I3Q14994 RNU6-1143P-201ENST00000516125 104 ntBASIC4.37□□□□□ -1.71
NR1I3Q14994 RN7SKP60-201ENST00000516985 239 ntBASIC4.37□□□□□ -1.71
NR1I3Q14994 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.37□□□□□ -1.71
NR1I3Q14994 AC131281.1-201ENST00000522984 164 ntBASIC4.37□□□□□ -1.71
NR1I3Q14994 AC091516.1-201ENST00000549191 703 ntBASIC4.37□□□□□ -1.71
NR1I3Q14994 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.37□□□□□ -1.71
NR1I3Q14994 AC067852.3-201ENST00000589177 561 ntBASIC4.37□□□□□ -1.71
NR1I3Q14994 AC012669.1-201ENST00000603209 283 ntBASIC4.37□□□□□ -1.71
NR1I3Q14994 AL450472.3-201ENST00000615578 367 ntBASIC4.37□□□□□ -1.71
NR1I3Q14994 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.37□□□□□ -1.71
NR1I3Q14994 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.37□□□□□ -1.71
NR1I3Q14994 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
NR1I3Q14994 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.37□□□□□ -1.71
NR1I3Q14994 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NR1I3Q14994 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
NR1I3Q14994 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
NR1I3Q14994 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NR1I3Q14994 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NR1I3Q14994 ZNF72P-201ENST00000425869 1908 ntBASIC4.36□□□□□ -1.71
NR1I3Q14994 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NR1I3Q14994 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NR1I3Q14994 AL137003.2-201ENST00000606924 2538 ntBASIC4.36□□□□□ -1.71
NR1I3Q14994 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NR1I3Q14994 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NR1I3Q14994 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NR1I3Q14994 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NR1I3Q14994 AC018529.3-201ENST00000624212 2254 ntBASIC4.36□□□□□ -1.71
NR1I3Q14994 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.36□□□□□ -1.71
NR1I3Q14994 RNA5SP366-201ENST00000365454 123 ntBASIC4.36□□□□□ -1.71
NR1I3Q14994 DEFB109C-201ENST00000382575 264 ntBASIC4.36□□□□□ -1.71
NR1I3Q14994 DEFB109B-201ENST00000382656 264 ntBASIC4.36□□□□□ -1.71
NR1I3Q14994 Y_RNA.424-201ENST00000384063 103 ntBASIC4.36□□□□□ -1.71
NR1I3Q14994 RNU6-45P-201ENST00000384471 107 ntBASIC4.36□□□□□ -1.71
NR1I3Q14994 RNU6-14P-201ENST00000384630 106 ntBASIC4.36□□□□□ -1.71
NR1I3Q14994 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.36□□□□□ -1.71
NR1I3Q14994 SSXP9-201ENST00000417503 292 ntBASIC4.36□□□□□ -1.71
NR1I3Q14994 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.36□□□□□ -1.71
NR1I3Q14994 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.36□□□□□ -1.71
NR1I3Q14994 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.36□□□□□ -1.71
NR1I3Q14994 AC008571.1-201ENST00000467232 300 ntBASIC4.36□□□□□ -1.71
NR1I3Q14994 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.36□□□□□ -1.71
NR1I3Q14994 RPL7P23-201ENST00000493874 747 ntBASIC4.36□□□□□ -1.71
NR1I3Q14994 AC105758.1-201ENST00000506038 399 ntBASIC4.36□□□□□ -1.71
NR1I3Q14994 MIR2114-201ENST00000516645 80 ntBASIC4.36□□□□□ -1.71
NR1I3Q14994 CDH12P4-201ENST00000517835 295 ntBASIC4.36□□□□□ -1.71
NR1I3Q14994 CDH12P3-201ENST00000517935 295 ntBASIC4.36□□□□□ -1.71
NR1I3Q14994 CDH12P1-201ENST00000518435 295 ntBASIC4.36□□□□□ -1.71
NR1I3Q14994 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NR1I3Q14994 AC026470.2-201ENST00000561492 181 ntBASIC4.36□□□□□ -1.71
NR1I3Q14994 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.36□□□□□ -1.71
NR1I3Q14994 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.36□□□□□ -1.71
NR1I3Q14994 AL355812.1-201ENST00000603215 216 ntBASIC4.36□□□□□ -1.71
NR1I3Q14994 AC104763.2-201ENST00000604179 382 ntBASIC4.36□□□□□ -1.71
NR1I3Q14994 AC024940.4-201ENST00000605507 246 ntBASIC4.36□□□□□ -1.71
NR1I3Q14994 AL606534.2-204ENST00000635008 178 ntBASIC4.36□□□□□ -1.71
NR1I3Q14994 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.36□□□□□ -1.71
NR1I3Q14994 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NR1I3Q14994 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NR1I3Q14994 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
NR1I3Q14994 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.35□□□□□ -1.71
NR1I3Q14994 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NR1I3Q14994 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NR1I3Q14994 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms