Protein–RNA interactions for Protein: Q12996

CSTF3, Cleavage stimulation factor subunit 3, humanhuman

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3Q12996 AC104027.1-201ENST00000521887 300 ntBASIC3.19□□□□□ -1.9
CSTF3Q12996 MTCYBP20-201ENST00000524239 1129 ntBASIC3.19□□□□□ -1.9
CSTF3Q12996 FAM92A1P1-201ENST00000528023 890 ntBASIC3.19□□□□□ -1.9
CSTF3Q12996 OR5B10P-201ENST00000532869 642 ntBASIC3.19□□□□□ -1.9
CSTF3Q12996 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.19□□□□□ -1.9
CSTF3Q12996 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.19□□□□□ -1.9
CSTF3Q12996 AC068135.2-201ENST00000569293 1028 ntBASIC3.19□□□□□ -1.9
CSTF3Q12996 AC024619.4-201ENST00000580924 316 ntBASIC3.19□□□□□ -1.9
CSTF3Q12996 MIR3922-201ENST00000585192 84 ntBASIC3.19□□□□□ -1.9
CSTF3Q12996 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.19□□□□□ -1.9
CSTF3Q12996 AL022154.1-201ENST00000604698 785 ntBASIC3.19□□□□□ -1.9
CSTF3Q12996 FTX_3.1-201ENST00000610451 147 ntBASIC3.19□□□□□ -1.9
CSTF3Q12996 uc_338.1-201ENST00000612113 180 ntBASIC3.19□□□□□ -1.9
CSTF3Q12996 AC012409.4-201ENST00000612923 249 ntBASIC3.19□□□□□ -1.9
CSTF3Q12996 AL359547.2-201ENST00000615810 418 ntBASIC3.19□□□□□ -1.9
CSTF3Q12996 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.19□□□□□ -1.9
CSTF3Q12996 AC025034.2-201ENST00000623264 286 ntBASIC3.19□□□□□ -1.9
CSTF3Q12996 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.19□□□□□ -1.9
CSTF3Q12996 AL512643.1-201ENST00000635735 524 ntBASIC3.19□□□□□ -1.9
CSTF3Q12996 AC233263.6-201ENST00000631132 1963 ntBASIC3.19□□□□□ -1.9
CSTF3Q12996 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.19□□□□□ -1.9
CSTF3Q12996 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CSTF3Q12996 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.18□□□□□ -1.9
CSTF3Q12996 AL359693.1-201ENST00000614959 2407 ntBASIC3.18□□□□□ -1.9
CSTF3Q12996 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CSTF3Q12996 Y_RNA.1-201ENST00000352915 104 ntBASIC3.18□□□□□ -1.9
CSTF3Q12996 SNORD56.3-201ENST00000363507 71 ntBASIC3.18□□□□□ -1.9
CSTF3Q12996 RPL5P18-201ENST00000406671 891 ntBASIC3.18□□□□□ -1.9
CSTF3Q12996 RNU2-9P-201ENST00000410194 145 ntBASIC3.18□□□□□ -1.9
CSTF3Q12996 RN7SKP27-201ENST00000410684 333 ntBASIC3.18□□□□□ -1.9
CSTF3Q12996 RNU2-68P-201ENST00000410878 191 ntBASIC3.18□□□□□ -1.9
CSTF3Q12996 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.18□□□□□ -1.9
CSTF3Q12996 AC080125.1-201ENST00000414888 684 ntBASIC3.18□□□□□ -1.9
CSTF3Q12996 HSPE1P1-201ENST00000421494 318 ntBASIC3.18□□□□□ -1.9
CSTF3Q12996 ISCA1P1-201ENST00000426679 387 ntBASIC3.18□□□□□ -1.9
CSTF3Q12996 HMGN2P31-201ENST00000432430 273 ntBASIC3.18□□□□□ -1.9
CSTF3Q12996 CST9LP2-201ENST00000437612 320 ntBASIC3.18□□□□□ -1.9
CSTF3Q12996 AC009969.1-201ENST00000438726 172 ntBASIC3.18□□□□□ -1.9
CSTF3Q12996 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.18□□□□□ -1.9
CSTF3Q12996 MRPS17P3-201ENST00000465453 385 ntBASIC3.18□□□□□ -1.9
CSTF3Q12996 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.18□□□□□ -1.9
CSTF3Q12996 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.18□□□□□ -1.9
CSTF3Q12996 RPL37P25-201ENST00000507308 276 ntBASIC3.18□□□□□ -1.9
CSTF3Q12996 RNU6-123P-201ENST00000516163 102 ntBASIC3.18□□□□□ -1.9
CSTF3Q12996 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.18□□□□□ -1.9
CSTF3Q12996 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.18□□□□□ -1.9
CSTF3Q12996 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.18□□□□□ -1.9
CSTF3Q12996 OR5AL2P-201ENST00000532185 920 ntBASIC3.18□□□□□ -1.9
CSTF3Q12996 AC022880.1-201ENST00000534017 973 ntBASIC3.18□□□□□ -1.9
CSTF3Q12996 ADI1P3-201ENST00000549509 470 ntBASIC3.18□□□□□ -1.9
CSTF3Q12996 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.18□□□□□ -1.9
CSTF3Q12996 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
CSTF3Q12996 AC087241.4-201ENST00000612441 480 ntBASIC3.18□□□□□ -1.9
CSTF3Q12996 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CSTF3Q12996 AL158209.2-201ENST00000619266 216 ntBASIC3.18□□□□□ -1.9
CSTF3Q12996 AC073534.2-201ENST00000620377 381 ntBASIC3.18□□□□□ -1.9
CSTF3Q12996 U6.114-201ENST00000636407 96 ntBASIC3.18□□□□□ -1.9
CSTF3Q12996 Z99571.1-201ENST00000636677 394 ntBASIC3.18□□□□□ -1.9
CSTF3Q12996 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.18□□□□□ -1.9
CSTF3Q12996 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CSTF3Q12996 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CSTF3Q12996 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CSTF3Q12996 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.18□□□□□ -1.9
CSTF3Q12996 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CSTF3Q12996 AL049781.1-201ENST00000623195 3585 ntBASIC3.17□□□□□ -1.9
CSTF3Q12996 SNORA62.1-201ENST00000364287 154 ntBASIC3.17□□□□□ -1.9
CSTF3Q12996 SNORA14A-201ENST00000364773 135 ntBASIC3.17□□□□□ -1.9
CSTF3Q12996 RNU6-61P-201ENST00000365528 109 ntBASIC3.17□□□□□ -1.9
CSTF3Q12996 RNU6-1103P-201ENST00000384150 107 ntBASIC3.17□□□□□ -1.9
CSTF3Q12996 RNU6-198P-201ENST00000384258 104 ntBASIC3.17□□□□□ -1.9
CSTF3Q12996 MIR454-201ENST00000390180 115 ntBASIC3.17□□□□□ -1.9
CSTF3Q12996 SNORA48.7-201ENST00000391302 135 ntBASIC3.17□□□□□ -1.9
CSTF3Q12996 MRPL50P2-201ENST00000416821 482 ntBASIC3.17□□□□□ -1.9
CSTF3Q12996 MTATP6P18-201ENST00000417994 673 ntBASIC3.17□□□□□ -1.9
CSTF3Q12996 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CSTF3Q12996 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.17□□□□□ -1.9
CSTF3Q12996 RPS15AP9-201ENST00000439856 381 ntBASIC3.17□□□□□ -1.9
CSTF3Q12996 ATP5C1P1-201ENST00000441945 895 ntBASIC3.17□□□□□ -1.9
CSTF3Q12996 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.17□□□□□ -1.9
CSTF3Q12996 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.17□□□□□ -1.9
CSTF3Q12996 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.17□□□□□ -1.9
CSTF3Q12996 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.17□□□□□ -1.9
CSTF3Q12996 SNORD27.1-201ENST00000516319 72 ntBASIC3.17□□□□□ -1.9
CSTF3Q12996 RNU6-914P-201ENST00000516749 109 ntBASIC3.17□□□□□ -1.9
CSTF3Q12996 SNORA31.26-201ENST00000517250 137 ntBASIC3.17□□□□□ -1.9
CSTF3Q12996 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CSTF3Q12996 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.17□□□□□ -1.9
CSTF3Q12996 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.17□□□□□ -1.9
CSTF3Q12996 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.17□□□□□ -1.9
CSTF3Q12996 MTCO3P24-201ENST00000572729 782 ntBASIC3.17□□□□□ -1.9
CSTF3Q12996 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.17□□□□□ -1.9
CSTF3Q12996 AC008536.2-201ENST00000607284 349 ntBASIC3.17□□□□□ -1.9
CSTF3Q12996 U3.45-201ENST00000607547 219 ntBASIC3.17□□□□□ -1.9
CSTF3Q12996 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.17□□□□□ -1.9
CSTF3Q12996 AL157786.1-207ENST00000627771 695 ntBASIC3.17□□□□□ -1.9
CSTF3Q12996 AC084035.1-201ENST00000634543 607 ntBASIC3.17□□□□□ -1.9
CSTF3Q12996 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.17□□□□□ -1.9
CSTF3Q12996 MTND5P17-201ENST00000418405 1603 ntBASIC3.17□□□□□ -1.9
CSTF3Q12996 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CSTF3Q12996 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms