Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC067942.3-201ENST00000512025 362 ntBASIC4.65□□□□□ -1.67
PCDH1Q08174 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.65□□□□□ -1.67
PCDH1Q08174 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDH1Q08174 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDH1Q08174 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDH1Q08174 AC103996.1-201ENST00000555468 102 ntBASIC4.65□□□□□ -1.67
PCDH1Q08174 AL137100.2-201ENST00000555786 315 ntBASIC4.65□□□□□ -1.67
PCDH1Q08174 HMGB1P14-201ENST00000557424 591 ntBASIC4.65□□□□□ -1.67
PCDH1Q08174 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDH1Q08174 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDH1Q08174 MIR5699-201ENST00000578903 90 ntBASIC4.65□□□□□ -1.67
PCDH1Q08174 AC091905.4-201ENST00000623432 202 ntBASIC4.65□□□□□ -1.67
PCDH1Q08174 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
PCDH1Q08174 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
PCDH1Q08174 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
PCDH1Q08174 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDH1Q08174 DDX18P3-201ENST00000404856 2007 ntBASIC4.65□□□□□ -1.67
PCDH1Q08174 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PCDH1Q08174 AC125257.1-201ENST00000560400 2930 ntBASIC4.65□□□□□ -1.67
PCDH1Q08174 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
PCDH1Q08174 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDH1Q08174 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDH1Q08174 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDH1Q08174 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDH1Q08174 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
PCDH1Q08174 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDH1Q08174 RLIMP1-201ENST00000339626 1680 ntBASIC4.64□□□□□ -1.67
PCDH1Q08174 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDH1Q08174 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDH1Q08174 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDH1Q08174 MIR335-201ENST00000362173 94 ntBASIC4.64□□□□□ -1.67
PCDH1Q08174 RN7SKP104-201ENST00000362605 328 ntBASIC4.64□□□□□ -1.67
PCDH1Q08174 Y_RNA.458-201ENST00000384240 102 ntBASIC4.64□□□□□ -1.67
PCDH1Q08174 Y_RNA.539-201ENST00000384635 107 ntBASIC4.64□□□□□ -1.67
PCDH1Q08174 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PCDH1Q08174 RNU2-33P-201ENST00000410344 192 ntBASIC4.64□□□□□ -1.67
PCDH1Q08174 RNU2-71P-201ENST00000411395 189 ntBASIC4.64□□□□□ -1.67
PCDH1Q08174 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDH1Q08174 SDAD1P3-201ENST00000427380 333 ntBASIC4.64□□□□□ -1.67
PCDH1Q08174 C4BPAP2-201ENST00000428434 478 ntBASIC4.64□□□□□ -1.67
PCDH1Q08174 AL627311.1-201ENST00000431514 115 ntBASIC4.64□□□□□ -1.67
PCDH1Q08174 HIGD1AP2-201ENST00000446367 280 ntBASIC4.64□□□□□ -1.67
PCDH1Q08174 AURKAPS2-201ENST00000454983 333 ntBASIC4.64□□□□□ -1.67
PCDH1Q08174 RPS5P7-201ENST00000456664 608 ntBASIC4.64□□□□□ -1.67
PCDH1Q08174 RPL21P13-201ENST00000488305 481 ntBASIC4.64□□□□□ -1.67
PCDH1Q08174 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDH1Q08174 RNU6-612P-201ENST00000516909 102 ntBASIC4.64□□□□□ -1.67
PCDH1Q08174 AC109479.2-201ENST00000517842 174 ntBASIC4.64□□□□□ -1.67
PCDH1Q08174 AL590705.4-201ENST00000532209 134 ntBASIC4.64□□□□□ -1.67
PCDH1Q08174 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDH1Q08174 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDH1Q08174 MIR4646-201ENST00000580775 63 ntBASIC4.64□□□□□ -1.67
PCDH1Q08174 AC008121.1-201ENST00000603244 268 ntBASIC4.64□□□□□ -1.67
PCDH1Q08174 AC010900.2-201ENST00000604508 210 ntBASIC4.64□□□□□ -1.67
PCDH1Q08174 AC006077.1-201ENST00000604746 343 ntBASIC4.64□□□□□ -1.67
PCDH1Q08174 AL161629.2-201ENST00000615347 275 ntBASIC4.64□□□□□ -1.67
PCDH1Q08174 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.64□□□□□ -1.67
PCDH1Q08174 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDH1Q08174 AC116096.1-201ENST00000566804 2314 ntBASIC4.64□□□□□ -1.67
PCDH1Q08174 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDH1Q08174 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDH1Q08174 AL592437.2-201ENST00000421655 2434 ntBASIC4.64□□□□□ -1.67
PCDH1Q08174 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.63□□□□□ -1.67
PCDH1Q08174 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDH1Q08174 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDH1Q08174 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
PCDH1Q08174 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PCDH1Q08174 OR14L1P-202ENST00000641545 3009 ntBASIC4.63□□□□□ -1.67
PCDH1Q08174 RNU1-83P-201ENST00000363426 164 ntBASIC4.63□□□□□ -1.67
PCDH1Q08174 Y_RNA.237-201ENST00000364439 102 ntBASIC4.63□□□□□ -1.67
PCDH1Q08174 RNA5SP235-201ENST00000365411 114 ntBASIC4.63□□□□□ -1.67
PCDH1Q08174 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
PCDH1Q08174 AL592291.1-201ENST00000403830 352 ntBASIC4.63□□□□□ -1.67
PCDH1Q08174 MTCYBP2-201ENST00000407745 171 ntBASIC4.63□□□□□ -1.67
PCDH1Q08174 MTND3P9-201ENST00000429526 346 ntBASIC4.63□□□□□ -1.67
PCDH1Q08174 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDH1Q08174 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDH1Q08174 RPS26P2-201ENST00000440331 348 ntBASIC4.63□□□□□ -1.67
PCDH1Q08174 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDH1Q08174 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PCDH1Q08174 AC079354.2-201ENST00000453523 154 ntBASIC4.63□□□□□ -1.67
PCDH1Q08174 PRELID3BP1-201ENST00000457142 540 ntBASIC4.63□□□□□ -1.67
PCDH1Q08174 RPS20P22-201ENST00000473700 357 ntBASIC4.63□□□□□ -1.67
PCDH1Q08174 SCARNA22-201ENST00000503991 125 ntBASIC4.63□□□□□ -1.67
PCDH1Q08174 AK3P2-201ENST00000507976 429 ntBASIC4.63□□□□□ -1.67
PCDH1Q08174 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
PCDH1Q08174 SCARNA15.2-201ENST00000516409 127 ntBASIC4.63□□□□□ -1.67
PCDH1Q08174 SNORA81.3-201ENST00000517283 198 ntBASIC4.63□□□□□ -1.67
PCDH1Q08174 IGKV2-23-201ENST00000518729 323 ntBASIC4.63□□□□□ -1.67
PCDH1Q08174 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDH1Q08174 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDH1Q08174 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDH1Q08174 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDH1Q08174 AC022726.1-201ENST00000587475 207 ntBASIC4.63□□□□□ -1.67
PCDH1Q08174 AC011487.3-201ENST00000593607 453 ntBASIC4.63□□□□□ -1.67
PCDH1Q08174 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDH1Q08174 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
PCDH1Q08174 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.63□□□□□ -1.67
PCDH1Q08174 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDH1Q08174 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms