Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AL513124.1-201ENST00000450410 614 ntBASIC1.17□□□□□ -2.22
HIST1H1AQ02539 MTND2P24-201ENST00000453434 806 ntBASIC1.17□□□□□ -2.22
HIST1H1AQ02539 AC008481.1-201ENST00000463278 396 ntBASIC1.17□□□□□ -2.22
HIST1H1AQ02539 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.17□□□□□ -2.22
HIST1H1AQ02539 AC114801.2-201ENST00000503825 781 ntBASIC1.17□□□□□ -2.22
HIST1H1AQ02539 FAM92A1P2-202ENST00000504766 877 ntBASIC1.17□□□□□ -2.22
HIST1H1AQ02539 AC098862.1-201ENST00000504991 413 ntBASIC1.17□□□□□ -2.22
HIST1H1AQ02539 SNORA31.22-201ENST00000517204 135 ntBASIC1.17□□□□□ -2.22
HIST1H1AQ02539 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.17□□□□□ -2.22
HIST1H1AQ02539 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.17□□□□□ -2.22
HIST1H1AQ02539 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.17□□□□□ -2.22
HIST1H1AQ02539 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.17□□□□□ -2.22
HIST1H1AQ02539 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.17□□□□□ -2.22
HIST1H1AQ02539 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.17□□□□□ -2.22
HIST1H1AQ02539 MIR4255-201ENST00000579351 72 ntBASIC1.17□□□□□ -2.22
HIST1H1AQ02539 GAS5-AS1-201ENST00000602767 694 ntBASIC1.17□□□□□ -2.22
HIST1H1AQ02539 Z99571.1-201ENST00000636677 394 ntBASIC1.17□□□□□ -2.22
HIST1H1AQ02539 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
HIST1H1AQ02539 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC1.17□□□□□ -2.22
HIST1H1AQ02539 MTND5P10-201ENST00000603719 1809 ntBASIC1.17□□□□□ -2.22
HIST1H1AQ02539 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.16□□□□□ -2.22
HIST1H1AQ02539 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.16□□□□□ -2.22
HIST1H1AQ02539 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
HIST1H1AQ02539 RNU6-878P-201ENST00000384578 110 ntBASIC1.16□□□□□ -2.22
HIST1H1AQ02539 MIR150-201ENST00000385048 84 ntBASIC1.16□□□□□ -2.22
HIST1H1AQ02539 MIR320A-201ENST00000385302 82 ntBASIC1.16□□□□□ -2.22
HIST1H1AQ02539 MIR1304-201ENST00000408243 91 ntBASIC1.16□□□□□ -2.22
HIST1H1AQ02539 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.16□□□□□ -2.22
HIST1H1AQ02539 ZYG11AP1-201ENST00000430329 837 ntBASIC1.16□□□□□ -2.22
HIST1H1AQ02539 RSU1P2-202ENST00000437884 485 ntBASIC1.16□□□□□ -2.22
HIST1H1AQ02539 USP9YP10-201ENST00000454868 628 ntBASIC1.16□□□□□ -2.22
HIST1H1AQ02539 MTND4P2-201ENST00000507767 1203 ntBASIC1.16□□□□□ -2.22
HIST1H1AQ02539 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.16□□□□□ -2.22
HIST1H1AQ02539 AC116337.1-201ENST00000509680 687 ntBASIC1.16□□□□□ -2.22
HIST1H1AQ02539 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.16□□□□□ -2.22
HIST1H1AQ02539 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.16□□□□□ -2.22
HIST1H1AQ02539 AP005597.4-201ENST00000526762 229 ntBASIC1.16□□□□□ -2.22
HIST1H1AQ02539 DUXAP5-201ENST00000529668 529 ntBASIC1.16□□□□□ -2.22
HIST1H1AQ02539 AC008269.2-201ENST00000561915 1105 ntBASIC1.16□□□□□ -2.22
HIST1H1AQ02539 SNORD53B-201ENST00000577887 78 ntBASIC1.16□□□□□ -2.22
HIST1H1AQ02539 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.16□□□□□ -2.22
HIST1H1AQ02539 AC024619.4-201ENST00000580924 316 ntBASIC1.16□□□□□ -2.22
HIST1H1AQ02539 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.16□□□□□ -2.22
HIST1H1AQ02539 AC022202.1-201ENST00000613515 211 ntBASIC1.16□□□□□ -2.22
HIST1H1AQ02539 LINC00216-201ENST00000623548 1126 ntBASIC1.16□□□□□ -2.22
HIST1H1AQ02539 AC092192.1-201ENST00000633154 1018 ntBASIC1.16□□□□□ -2.22
HIST1H1AQ02539 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
HIST1H1AQ02539 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
HIST1H1AQ02539 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.15□□□□□ -2.23
HIST1H1AQ02539 RNU6-77P-201ENST00000410554 91 ntBASIC1.15□□□□□ -2.23
HIST1H1AQ02539 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.15□□□□□ -2.23
HIST1H1AQ02539 AL445669.1-201ENST00000426743 755 ntBASIC1.15□□□□□ -2.23
HIST1H1AQ02539 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.15□□□□□ -2.23
HIST1H1AQ02539 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.15□□□□□ -2.23
HIST1H1AQ02539 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.15□□□□□ -2.23
HIST1H1AQ02539 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.15□□□□□ -2.23
HIST1H1AQ02539 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.15□□□□□ -2.23
HIST1H1AQ02539 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.15□□□□□ -2.23
HIST1H1AQ02539 AC008837.1-201ENST00000511513 412 ntBASIC1.15□□□□□ -2.23
HIST1H1AQ02539 SNORD19.2-201ENST00000516978 73 ntBASIC1.15□□□□□ -2.23
HIST1H1AQ02539 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.15□□□□□ -2.23
HIST1H1AQ02539 IMMP1LP2-201ENST00000552954 492 ntBASIC1.15□□□□□ -2.23
HIST1H1AQ02539 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.15□□□□□ -2.23
HIST1H1AQ02539 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
HIST1H1AQ02539 PRR13P7-201ENST00000605538 430 ntBASIC1.15□□□□□ -2.23
HIST1H1AQ02539 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.15□□□□□ -2.23
HIST1H1AQ02539 AC009974.1-201ENST00000608881 455 ntBASIC1.15□□□□□ -2.23
HIST1H1AQ02539 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.15□□□□□ -2.23
HIST1H1AQ02539 MIR5739-201ENST00000619803 80 ntBASIC1.15□□□□□ -2.23
HIST1H1AQ02539 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.14□□□□□ -2.23
HIST1H1AQ02539 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
HIST1H1AQ02539 RNU1-42P-201ENST00000364033 160 ntBASIC1.14□□□□□ -2.23
HIST1H1AQ02539 RNU2-33P-201ENST00000410344 192 ntBASIC1.14□□□□□ -2.23
HIST1H1AQ02539 UBE2FP1-201ENST00000416536 447 ntBASIC1.14□□□□□ -2.23
HIST1H1AQ02539 CCDC58P2-201ENST00000417131 366 ntBASIC1.14□□□□□ -2.23
HIST1H1AQ02539 AC244453.4-201ENST00000419150 388 ntBASIC1.14□□□□□ -2.23
HIST1H1AQ02539 AC246680.2-201ENST00000422106 389 ntBASIC1.14□□□□□ -2.23
HIST1H1AQ02539 OOSP1P1-201ENST00000423265 274 ntBASIC1.14□□□□□ -2.23
HIST1H1AQ02539 RPL31P54-201ENST00000429803 370 ntBASIC1.14□□□□□ -2.23
HIST1H1AQ02539 AC244035.1-201ENST00000430042 390 ntBASIC1.14□□□□□ -2.23
HIST1H1AQ02539 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.14□□□□□ -2.23
HIST1H1AQ02539 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.14□□□□□ -2.23
HIST1H1AQ02539 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.14□□□□□ -2.23
HIST1H1AQ02539 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.14□□□□□ -2.23
HIST1H1AQ02539 CYP2C59P-201ENST00000457790 269 ntBASIC1.14□□□□□ -2.23
HIST1H1AQ02539 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.14□□□□□ -2.23
HIST1H1AQ02539 SNORD121B-201ENST00000458838 81 ntBASIC1.14□□□□□ -2.23
HIST1H1AQ02539 AC117503.1-201ENST00000472241 394 ntBASIC1.14□□□□□ -2.23
HIST1H1AQ02539 COX7A2P2-201ENST00000505291 250 ntBASIC1.14□□□□□ -2.23
HIST1H1AQ02539 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.14□□□□□ -2.23
HIST1H1AQ02539 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.14□□□□□ -2.23
HIST1H1AQ02539 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.14□□□□□ -2.23
HIST1H1AQ02539 SNORA4.4-201ENST00000515921 135 ntBASIC1.14□□□□□ -2.23
HIST1H1AQ02539 RNU6-362P-201ENST00000516736 90 ntBASIC1.14□□□□□ -2.23
HIST1H1AQ02539 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
HIST1H1AQ02539 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.14□□□□□ -2.23
HIST1H1AQ02539 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.14□□□□□ -2.23
HIST1H1AQ02539 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.14□□□□□ -2.23
HIST1H1AQ02539 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC1.14□□□□□ -2.23
HIST1H1AQ02539 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms