Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 SNORA51.12-201ENST00000384448 134 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
SCN7AQ01118 RNU4-78P-201ENST00000410940 126 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 RPL7L1P10-201ENST00000427790 463 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 AL596276.1-201ENST00000434465 418 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.16□□□□□ -2.22
SCN7AQ01118 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.16□□□□□ -2.22
SCN7AQ01118 RNF138P1-201ENST00000502765 546 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 AC021146.8-201ENST00000507455 733 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SCN7AQ01118 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.16□□□□□ -2.22
SCN7AQ01118 AC106052.1-201ENST00000608029 497 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 AP005137.2-201ENST00000609238 400 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 MIR6857-201ENST00000613267 93 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 SDAD1P2-201ENST00000441308 2028 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.15□□□□□ -2.23
SCN7AQ01118 RNU6-198P-201ENST00000384258 104 ntBASIC1.15□□□□□ -2.23
SCN7AQ01118 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.15□□□□□ -2.23
SCN7AQ01118 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.15□□□□□ -2.23
SCN7AQ01118 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.15□□□□□ -2.23
SCN7AQ01118 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.15□□□□□ -2.23
SCN7AQ01118 HMGN1P33-201ENST00000432945 451 ntBASIC1.15□□□□□ -2.23
SCN7AQ01118 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.15□□□□□ -2.23
SCN7AQ01118 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC1.15□□□□□ -2.23
SCN7AQ01118 AC118273.2-201ENST00000532092 465 ntBASIC1.15□□□□□ -2.23
SCN7AQ01118 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.15□□□□□ -2.23
SCN7AQ01118 AC091304.6-201ENST00000619761 202 ntBASIC1.15□□□□□ -2.23
SCN7AQ01118 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.15□□□□□ -2.23
SCN7AQ01118 AC109454.4-201ENST00000623411 649 ntBASIC1.15□□□□□ -2.23
SCN7AQ01118 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.15□□□□□ -2.23
SCN7AQ01118 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.14□□□□□ -2.23
SCN7AQ01118 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.14□□□□□ -2.23
SCN7AQ01118 RNA5SP450-201ENST00000411206 102 ntBASIC1.14□□□□□ -2.23
SCN7AQ01118 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.14□□□□□ -2.23
SCN7AQ01118 RPS29P28-201ENST00000446439 141 ntBASIC1.14□□□□□ -2.23
SCN7AQ01118 RNU6-1132P-201ENST00000459214 107 ntBASIC1.14□□□□□ -2.23
SCN7AQ01118 AC055731.1-201ENST00000474387 401 ntBASIC1.14□□□□□ -2.23
SCN7AQ01118 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.14□□□□□ -2.23
SCN7AQ01118 MIR4287-201ENST00000579398 78 ntBASIC1.14□□□□□ -2.23
SCN7AQ01118 OR1M4P-201ENST00000589199 287 ntBASIC1.14□□□□□ -2.23
SCN7AQ01118 AC112191.3-201ENST00000604371 277 ntBASIC1.14□□□□□ -2.23
SCN7AQ01118 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.14□□□□□ -2.23
SCN7AQ01118 RNU6-1293P-201ENST00000384077 107 ntBASIC1.13□□□□□ -2.23
SCN7AQ01118 RNU6-185P-201ENST00000384421 107 ntBASIC1.13□□□□□ -2.23
SCN7AQ01118 MIR767-201ENST00000390228 109 ntBASIC1.13□□□□□ -2.23
SCN7AQ01118 RNU6-244P-201ENST00000391028 104 ntBASIC1.13□□□□□ -2.23
SCN7AQ01118 AL356432.1-201ENST00000405809 419 ntBASIC1.13□□□□□ -2.23
SCN7AQ01118 CYCSP48-201ENST00000417124 323 ntBASIC1.13□□□□□ -2.23
SCN7AQ01118 EBAG9P1-201ENST00000418955 543 ntBASIC1.13□□□□□ -2.23
SCN7AQ01118 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.13□□□□□ -2.23
SCN7AQ01118 AC004941.2-201ENST00000427009 228 ntBASIC1.13□□□□□ -2.23
SCN7AQ01118 AC004383.1-201ENST00000438135 289 ntBASIC1.13□□□□□ -2.23
SCN7AQ01118 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.13□□□□□ -2.23
SCN7AQ01118 AC118469.1-201ENST00000442943 488 ntBASIC1.13□□□□□ -2.23
SCN7AQ01118 OR52A4P-202ENST00000481634 799 ntBASIC1.13□□□□□ -2.23
SCN7AQ01118 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.13□□□□□ -2.23
SCN7AQ01118 AP005902.1-201ENST00000521358 186 ntBASIC1.13□□□□□ -2.23
SCN7AQ01118 MIR4529-201ENST00000578110 78 ntBASIC1.13□□□□□ -2.23
SCN7AQ01118 AC007038.2-201ENST00000608095 740 ntBASIC1.13□□□□□ -2.23
SCN7AQ01118 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.13□□□□□ -2.23
SCN7AQ01118 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
SCN7AQ01118 RNU6-156P-201ENST00000621869 107 ntBASIC1.13□□□□□ -2.23
SCN7AQ01118 MIR7515-201ENST00000637837 67 ntBASIC1.13□□□□□ -2.23
SCN7AQ01118 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
SCN7AQ01118 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.13□□□□□ -2.23
SCN7AQ01118 RNU5D-1-201ENST00000363299 116 ntBASIC1.13□□□□□ -2.23
SCN7AQ01118 AC093155.1-201ENST00000440164 826 ntBASIC1.13□□□□□ -2.23
SCN7AQ01118 OSTCP8-201ENST00000445117 448 ntBASIC1.13□□□□□ -2.23
SCN7AQ01118 OR6C72P-201ENST00000451403 892 ntBASIC1.13□□□□□ -2.23
SCN7AQ01118 AC111000.5-201ENST00000506559 1178 ntBASIC1.13□□□□□ -2.23
SCN7AQ01118 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.13□□□□□ -2.23
SCN7AQ01118 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.13□□□□□ -2.23
SCN7AQ01118 AC243773.3-201ENST00000613270 256 ntBASIC1.13□□□□□ -2.23
SCN7AQ01118 AC027309.3-201ENST00000623419 351 ntBASIC1.13□□□□□ -2.23
SCN7AQ01118 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.13□□□□□ -2.23
SCN7AQ01118 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.13□□□□□ -2.23
SCN7AQ01118 RNU6-173P-201ENST00000364215 104 ntBASIC1.12□□□□□ -2.23
SCN7AQ01118 RNU6-1197P-201ENST00000391183 107 ntBASIC1.12□□□□□ -2.23
SCN7AQ01118 RNA5SP56-201ENST00000410277 118 ntBASIC1.12□□□□□ -2.23
SCN7AQ01118 RNU6-955P-201ENST00000410497 104 ntBASIC1.12□□□□□ -2.23
SCN7AQ01118 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.12□□□□□ -2.23
SCN7AQ01118 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.12□□□□□ -2.23
SCN7AQ01118 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.12□□□□□ -2.23
SCN7AQ01118 AL359385.1-201ENST00000456509 365 ntBASIC1.12□□□□□ -2.23
SCN7AQ01118 AC087588.1-201ENST00000462203 316 ntBASIC1.12□□□□□ -2.23
SCN7AQ01118 AL121769.1-201ENST00000469473 401 ntBASIC1.12□□□□□ -2.23
SCN7AQ01118 AC021382.1-201ENST00000483523 359 ntBASIC1.12□□□□□ -2.23
SCN7AQ01118 KATNBL1P4-201ENST00000503545 918 ntBASIC1.12□□□□□ -2.23
SCN7AQ01118 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
SCN7AQ01118 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.12□□□□□ -2.23
SCN7AQ01118 DEFB108E-201ENST00000524692 240 ntBASIC1.12□□□□□ -2.23
SCN7AQ01118 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.12□□□□□ -2.23
SCN7AQ01118 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC1.12□□□□□ -2.23
SCN7AQ01118 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.12□□□□□ -2.23
SCN7AQ01118 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.12□□□□□ -2.23
SCN7AQ01118 MIR3609-201ENST00000582661 80 ntBASIC1.12□□□□□ -2.23
SCN7AQ01118 AC093838.1-201ENST00000613014 469 ntBASIC1.12□□□□□ -2.23
SCN7AQ01118 AL138955.1-201ENST00000622881 1040 ntBASIC1.12□□□□□ -2.23
SCN7AQ01118 AC008555.8-201ENST00000623602 2168 ntBASIC1.12□□□□□ -2.23
SCN7AQ01118 RNA5SP258-201ENST00000362750 119 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms