Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL137847.3-201ENST00000611521 109 ntBASIC2.46□□□□□ -2.02
CCNA1P78396 AC231657.1-201ENST00000624313 397 ntBASIC2.46□□□□□ -2.02
CCNA1P78396 MIR3199-2-201ENST00000636243 86 ntBASIC2.46□□□□□ -2.02
CCNA1P78396 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CCNA1P78396 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.46□□□□□ -2.02
CCNA1P78396 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CCNA1P78396 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.45□□□□□ -2.02
CCNA1P78396 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CCNA1P78396 RNU6-1159P-201ENST00000362933 107 ntBASIC2.45□□□□□ -2.02
CCNA1P78396 RNU6-224P-201ENST00000384055 107 ntBASIC2.45□□□□□ -2.02
CCNA1P78396 RNU6-298P-201ENST00000390888 96 ntBASIC2.45□□□□□ -2.02
CCNA1P78396 SNORA26.9-201ENST00000391322 122 ntBASIC2.45□□□□□ -2.02
CCNA1P78396 RNU6-1328P-201ENST00000410938 106 ntBASIC2.45□□□□□ -2.02
CCNA1P78396 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.45□□□□□ -2.02
CCNA1P78396 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.45□□□□□ -2.02
CCNA1P78396 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.45□□□□□ -2.02
CCNA1P78396 SNRPEP9-201ENST00000436794 238 ntBASIC2.45□□□□□ -2.02
CCNA1P78396 IPO7P1-201ENST00000442031 636 ntBASIC2.45□□□□□ -2.02
CCNA1P78396 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.45□□□□□ -2.02
CCNA1P78396 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.45□□□□□ -2.02
CCNA1P78396 AC080013.2-201ENST00000460866 323 ntBASIC2.45□□□□□ -2.02
CCNA1P78396 AC026801.1-201ENST00000497178 464 ntBASIC2.45□□□□□ -2.02
CCNA1P78396 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.45□□□□□ -2.02
CCNA1P78396 MTND4P2-201ENST00000507767 1203 ntBASIC2.45□□□□□ -2.02
CCNA1P78396 AC110760.3-202ENST00000515177 371 ntBASIC2.45□□□□□ -2.02
CCNA1P78396 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.45□□□□□ -2.02
CCNA1P78396 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.45□□□□□ -2.02
CCNA1P78396 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.45□□□□□ -2.02
CCNA1P78396 AC090079.2-201ENST00000575289 768 ntBASIC2.45□□□□□ -2.02
CCNA1P78396 TPMTP1-201ENST00000592307 737 ntBASIC2.45□□□□□ -2.02
CCNA1P78396 BNIP3P31-201ENST00000604515 566 ntBASIC2.45□□□□□ -2.02
CCNA1P78396 AC112220.2-201ENST00000605513 533 ntBASIC2.45□□□□□ -2.02
CCNA1P78396 AC103710.2-201ENST00000609912 942 ntBASIC2.45□□□□□ -2.02
CCNA1P78396 AC010678.1-201ENST00000614118 713 ntBASIC2.45□□□□□ -2.02
CCNA1P78396 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.45□□□□□ -2.02
CCNA1P78396 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.45□□□□□ -2.02
CCNA1P78396 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCNA1P78396 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCNA1P78396 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.44□□□□□ -2.02
CCNA1P78396 ZNF355P-201ENST00000427301 3216 ntBASIC2.44□□□□□ -2.02
CCNA1P78396 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CCNA1P78396 RNU1-51P-201ENST00000365345 176 ntBASIC2.44□□□□□ -2.02
CCNA1P78396 RNU6-432P-201ENST00000384196 109 ntBASIC2.44□□□□□ -2.02
CCNA1P78396 U8.13-201ENST00000390842 128 ntBASIC2.44□□□□□ -2.02
CCNA1P78396 RNU6-952P-201ENST00000391164 108 ntBASIC2.44□□□□□ -2.02
CCNA1P78396 AC019129.1-201ENST00000403786 261 ntBASIC2.44□□□□□ -2.02
CCNA1P78396 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.44□□□□□ -2.02
CCNA1P78396 RPL17P12-201ENST00000413391 526 ntBASIC2.44□□□□□ -2.02
CCNA1P78396 AL449283.1-202ENST00000418249 604 ntBASIC2.44□□□□□ -2.02
CCNA1P78396 EIF4EP4-201ENST00000424916 578 ntBASIC2.44□□□□□ -2.02
CCNA1P78396 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.44□□□□□ -2.02
CCNA1P78396 RPS29P20-201ENST00000489592 171 ntBASIC2.44□□□□□ -2.02
CCNA1P78396 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.44□□□□□ -2.02
CCNA1P78396 RN7SKP219-201ENST00000516825 296 ntBASIC2.44□□□□□ -2.02
CCNA1P78396 SNORD19.2-201ENST00000516978 73 ntBASIC2.44□□□□□ -2.02
CCNA1P78396 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.44□□□□□ -2.02
CCNA1P78396 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.44□□□□□ -2.02
CCNA1P78396 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.44□□□□□ -2.02
CCNA1P78396 AGGF1P5-201ENST00000567900 919 ntBASIC2.44□□□□□ -2.02
CCNA1P78396 RPS3AP23-202ENST00000574601 686 ntBASIC2.44□□□□□ -2.02
CCNA1P78396 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.44□□□□□ -2.02
CCNA1P78396 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.44□□□□□ -2.02
CCNA1P78396 AL391813.1-201ENST00000603098 260 ntBASIC2.44□□□□□ -2.02
CCNA1P78396 AL645944.1-201ENST00000603857 493 ntBASIC2.44□□□□□ -2.02
CCNA1P78396 AL021997.1-201ENST00000605757 193 ntBASIC2.44□□□□□ -2.02
CCNA1P78396 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.44□□□□□ -2.02
CCNA1P78396 AC009237.15-201ENST00000610252 501 ntBASIC2.44□□□□□ -2.02
CCNA1P78396 AL589743.7-201ENST00000612637 233 ntBASIC2.44□□□□□ -2.02
CCNA1P78396 OR1S1-201ENST00000624470 978 ntBASIC2.44□□□□□ -2.02
CCNA1P78396 AC093591.3-201ENST00000634516 308 ntBASIC2.44□□□□□ -2.02
CCNA1P78396 AC106858.1-201ENST00000637497 429 ntBASIC2.44□□□□□ -2.02
CCNA1P78396 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.43□□□□□ -2.02
CCNA1P78396 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCNA1P78396 OR5H15-201ENST00000383696 930 ntBASIC2.43□□□□□ -2.02
CCNA1P78396 RNU1-39P-201ENST00000383897 165 ntBASIC2.43□□□□□ -2.02
CCNA1P78396 Y_RNA.548-201ENST00000384656 105 ntBASIC2.43□□□□□ -2.02
CCNA1P78396 AL356421.1-201ENST00000403255 413 ntBASIC2.43□□□□□ -2.02
CCNA1P78396 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.43□□□□□ -2.02
CCNA1P78396 CYCSP48-201ENST00000417124 323 ntBASIC2.43□□□□□ -2.02
CCNA1P78396 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.43□□□□□ -2.02
CCNA1P78396 AC007677.1-201ENST00000445757 515 ntBASIC2.43□□□□□ -2.02
CCNA1P78396 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.43□□□□□ -2.02
CCNA1P78396 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.43□□□□□ -2.02
CCNA1P78396 CKS1BP2-201ENST00000497342 240 ntBASIC2.43□□□□□ -2.02
CCNA1P78396 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.43□□□□□ -2.02
CCNA1P78396 SNORA19.3-201ENST00000516165 130 ntBASIC2.43□□□□□ -2.02
CCNA1P78396 AP003497.1-201ENST00000528472 562 ntBASIC2.43□□□□□ -2.02
CCNA1P78396 AC007115.1-201ENST00000546853 234 ntBASIC2.43□□□□□ -2.02
CCNA1P78396 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.43□□□□□ -2.02
CCNA1P78396 AL450336.1-201ENST00000605180 586 ntBASIC2.43□□□□□ -2.02
CCNA1P78396 AC069294.1-201ENST00000608397 350 ntBASIC2.43□□□□□ -2.02
CCNA1P78396 AC103710.1-201ENST00000610003 901 ntBASIC2.43□□□□□ -2.02
CCNA1P78396 TUG1_2.1-201ENST00000614234 87 ntBASIC2.43□□□□□ -2.02
CCNA1P78396 AL356266.1-201ENST00000623311 483 ntBASIC2.43□□□□□ -2.02
CCNA1P78396 AL138960.2-201ENST00000625145 535 ntBASIC2.43□□□□□ -2.02
CCNA1P78396 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCNA1P78396 AL390862.1-201ENST00000635467 1469 ntBASIC2.43□□□□□ -2.02
CCNA1P78396 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCNA1P78396 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.42□□□□□ -2.02
CCNA1P78396 AC092447.10-201ENST00000620607 1652 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms