Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AL590410.1-201ENST00000617925 333 ntBASIC0.2□□□□□ -2.38
RPL39P62891 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
RPL39P62891 RNU6-629P-201ENST00000384061 103 ntBASIC0.19□□□□□ -2.38
RPL39P62891 SNORA29-201ENST00000384183 140 ntBASIC0.19□□□□□ -2.38
RPL39P62891 VTA1P1-201ENST00000414044 866 ntBASIC0.19□□□□□ -2.38
RPL39P62891 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
RPL39P62891 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.19□□□□□ -2.38
RPL39P62891 KATNBL1P3-201ENST00000443475 909 ntBASIC0.19□□□□□ -2.38
RPL39P62891 AL590365.1-201ENST00000450788 243 ntBASIC0.19□□□□□ -2.38
RPL39P62891 AC107626.1-201ENST00000471084 183 ntBASIC0.19□□□□□ -2.38
RPL39P62891 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC0.19□□□□□ -2.38
RPL39P62891 SCARNA16.2-201ENST00000516520 172 ntBASIC0.19□□□□□ -2.38
RPL39P62891 AC021739.1-201ENST00000559631 174 ntBASIC0.19□□□□□ -2.38
RPL39P62891 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC0.19□□□□□ -2.38
RPL39P62891 MIR4498-201ENST00000577599 66 ntBASIC0.19□□□□□ -2.38
RPL39P62891 BNIP3P16-201ENST00000589779 534 ntBASIC0.19□□□□□ -2.38
RPL39P62891 AL512605.2-201ENST00000592972 256 ntBASIC0.19□□□□□ -2.38
RPL39P62891 HSPE1P7-201ENST00000604681 321 ntBASIC0.19□□□□□ -2.38
RPL39P62891 AC025588.2-201ENST00000604851 466 ntBASIC0.19□□□□□ -2.38
RPL39P62891 AC113194.1-201ENST00000606037 500 ntBASIC0.19□□□□□ -2.38
RPL39P62891 AC009950.2-201ENST00000636548 183 ntBASIC0.19□□□□□ -2.38
RPL39P62891 MTND5P35-201ENST00000557537 1720 ntBASIC0.18□□□□□ -2.38
RPL39P62891 RNU1-105P-201ENST00000363470 161 ntBASIC0.18□□□□□ -2.38
RPL39P62891 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.18□□□□□ -2.38
RPL39P62891 Z82190.1-201ENST00000454534 490 ntBASIC0.18□□□□□ -2.38
RPL39P62891 HNRNPDLP3-201ENST00000456745 380 ntBASIC0.18□□□□□ -2.38
RPL39P62891 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.18□□□□□ -2.38
RPL39P62891 HMGN2P9-201ENST00000476875 229 ntBASIC0.18□□□□□ -2.38
RPL39P62891 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC0.18□□□□□ -2.38
RPL39P62891 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.18□□□□□ -2.38
RPL39P62891 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.18□□□□□ -2.38
RPL39P62891 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.18□□□□□ -2.38
RPL39P62891 AC108729.3-201ENST00000513484 108 ntBASIC0.18□□□□□ -2.38
RPL39P62891 AC025857.1-201ENST00000525252 377 ntBASIC0.18□□□□□ -2.38
RPL39P62891 AP003717.3-201ENST00000544832 1180 ntBASIC0.18□□□□□ -2.38
RPL39P62891 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.18□□□□□ -2.38
RPL39P62891 MIR5571-201ENST00000577998 113 ntBASIC0.18□□□□□ -2.38
RPL39P62891 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.18□□□□□ -2.38
RPL39P62891 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.18□□□□□ -2.38
RPL39P62891 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.18□□□□□ -2.38
RPL39P62891 AC008751.2-201ENST00000597885 980 ntBASIC0.18□□□□□ -2.38
RPL39P62891 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC0.18□□□□□ -2.38
RPL39P62891 AC068787.1-201ENST00000623908 691 ntBASIC0.18□□□□□ -2.38
RPL39P62891 AC092192.1-201ENST00000633154 1018 ntBASIC0.18□□□□□ -2.38
RPL39P62891 MIR5087-201ENST00000635826 76 ntBASIC0.18□□□□□ -2.38
RPL39P62891 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.18□□□□□ -2.38
RPL39P62891 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.18□□□□□ -2.38
RPL39P62891 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
RPL39P62891 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
RPL39P62891 RNU6-942P-201ENST00000363002 107 ntBASIC0.17□□□□□ -2.38
RPL39P62891 SNORA50A-201ENST00000384225 134 ntBASIC0.17□□□□□ -2.38
RPL39P62891 RNU1-78P-201ENST00000391248 165 ntBASIC0.17□□□□□ -2.38
RPL39P62891 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.17□□□□□ -2.38
RPL39P62891 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.17□□□□□ -2.38
RPL39P62891 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.17□□□□□ -2.38
RPL39P62891 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.17□□□□□ -2.38
RPL39P62891 CR769776.1-201ENST00000441254 787 ntBASIC0.17□□□□□ -2.38
RPL39P62891 USP9YP34-201ENST00000453983 808 ntBASIC0.17□□□□□ -2.38
RPL39P62891 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.17□□□□□ -2.38
RPL39P62891 SNRPFP3-201ENST00000457792 225 ntBASIC0.17□□□□□ -2.38
RPL39P62891 RPS29P1-201ENST00000465274 159 ntBASIC0.17□□□□□ -2.38
RPL39P62891 RAP1BP2-201ENST00000478270 544 ntBASIC0.17□□□□□ -2.38
RPL39P62891 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
RPL39P62891 CENPUP1-201ENST00000526649 1202 ntBASIC0.17□□□□□ -2.38
RPL39P62891 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.17□□□□□ -2.38
RPL39P62891 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.17□□□□□ -2.38
RPL39P62891 AC044913.1-201ENST00000557200 430 ntBASIC0.17□□□□□ -2.38
RPL39P62891 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.17□□□□□ -2.38
RPL39P62891 WISP1-OT1-201ENST00000602893 642 ntBASIC0.17□□□□□ -2.38
RPL39P62891 AC092474.3-201ENST00000603022 568 ntBASIC0.17□□□□□ -2.38
RPL39P62891 MIR7515-201ENST00000637837 67 ntBASIC0.17□□□□□ -2.38
RPL39P62891 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
RPL39P62891 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
RPL39P62891 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
RPL39P62891 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.16□□□□□ -2.38
RPL39P62891 OR4G2P-201ENST00000328113 903 ntBASIC0.16□□□□□ -2.38
RPL39P62891 RNU6-348P-201ENST00000384386 107 ntBASIC0.16□□□□□ -2.38
RPL39P62891 RN7SKP158-201ENST00000410453 326 ntBASIC0.16□□□□□ -2.38
RPL39P62891 UBE2V1P9-201ENST00000414760 368 ntBASIC0.16□□□□□ -2.38
RPL39P62891 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.16□□□□□ -2.38
RPL39P62891 CBX3P6-201ENST00000430257 527 ntBASIC0.16□□□□□ -2.38
RPL39P62891 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.16□□□□□ -2.38
RPL39P62891 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.16□□□□□ -2.38
RPL39P62891 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.16□□□□□ -2.38
RPL39P62891 CYP2C59P-201ENST00000457790 269 ntBASIC0.16□□□□□ -2.38
RPL39P62891 RPL31P3-201ENST00000458430 332 ntBASIC0.16□□□□□ -2.38
RPL39P62891 MTND3P6-201ENST00000485242 339 ntBASIC0.16□□□□□ -2.38
RPL39P62891 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.16□□□□□ -2.38
RPL39P62891 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC0.16□□□□□ -2.38
RPL39P62891 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.16□□□□□ -2.38
RPL39P62891 MRPS36P2-201ENST00000512569 299 ntBASIC0.16□□□□□ -2.38
RPL39P62891 RNU6-991P-201ENST00000516168 107 ntBASIC0.16□□□□□ -2.38
RPL39P62891 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.16□□□□□ -2.38
RPL39P62891 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.16□□□□□ -2.38
RPL39P62891 AC074051.3-201ENST00000570238 358 ntBASIC0.16□□□□□ -2.38
RPL39P62891 MIR5093-201ENST00000583199 100 ntBASIC0.16□□□□□ -2.38
RPL39P62891 AC136443.5-201ENST00000603741 370 ntBASIC0.16□□□□□ -2.38
RPL39P62891 AL161629.2-201ENST00000615347 275 ntBASIC0.16□□□□□ -2.38
RPL39P62891 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
RPL39P62891 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms