Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 ELOCP23-201ENST00000452014 332 ntBASIC3.83□□□□□ -1.8
RHBDL3P58872 AP001486.1-201ENST00000463339 476 ntBASIC3.83□□□□□ -1.8
RHBDL3P58872 RPS27P26-201ENST00000494583 239 ntBASIC3.83□□□□□ -1.8
RHBDL3P58872 AC093534.1-201ENST00000504977 132 ntBASIC3.83□□□□□ -1.8
RHBDL3P58872 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.83□□□□□ -1.8
RHBDL3P58872 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.83□□□□□ -1.8
RHBDL3P58872 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RHBDL3P58872 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.83□□□□□ -1.8
RHBDL3P58872 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.83□□□□□ -1.8
RHBDL3P58872 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.83□□□□□ -1.8
RHBDL3P58872 UBL5P2-201ENST00000583788 219 ntBASIC3.83□□□□□ -1.8
RHBDL3P58872 AL137843.1-201ENST00000605078 385 ntBASIC3.83□□□□□ -1.8
RHBDL3P58872 AC245008.1-201ENST00000608123 476 ntBASIC3.83□□□□□ -1.8
RHBDL3P58872 AC010678.1-201ENST00000614118 713 ntBASIC3.83□□□□□ -1.8
RHBDL3P58872 U2.21-201ENST00000637295 81 ntBASIC3.83□□□□□ -1.8
RHBDL3P58872 AL390237.1-201ENST00000404226 1415 ntBASIC3.83□□□□□ -1.8
RHBDL3P58872 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.83□□□□□ -1.8
RHBDL3P58872 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
RHBDL3P58872 MIR422A-201ENST00000362286 90 ntBASIC3.82□□□□□ -1.8
RHBDL3P58872 RNU6-778P-201ENST00000363269 103 ntBASIC3.82□□□□□ -1.8
RHBDL3P58872 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.82□□□□□ -1.8
RHBDL3P58872 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
RHBDL3P58872 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.82□□□□□ -1.8
RHBDL3P58872 AC133104.1-201ENST00000429100 218 ntBASIC3.82□□□□□ -1.8
RHBDL3P58872 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.82□□□□□ -1.8
RHBDL3P58872 RPS20P5-201ENST00000434808 360 ntBASIC3.82□□□□□ -1.8
RHBDL3P58872 AC098831.1-201ENST00000440661 216 ntBASIC3.82□□□□□ -1.8
RHBDL3P58872 AP000936.2-201ENST00000447151 681 ntBASIC3.82□□□□□ -1.8
RHBDL3P58872 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.82□□□□□ -1.8
RHBDL3P58872 AC008885.1-201ENST00000514930 301 ntBASIC3.82□□□□□ -1.8
RHBDL3P58872 RN7SKP298-201ENST00000515950 94 ntBASIC3.82□□□□□ -1.8
RHBDL3P58872 RNU1-103P-201ENST00000516502 125 ntBASIC3.82□□□□□ -1.8
RHBDL3P58872 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.82□□□□□ -1.8
RHBDL3P58872 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.82□□□□□ -1.8
RHBDL3P58872 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.82□□□□□ -1.8
RHBDL3P58872 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.82□□□□□ -1.8
RHBDL3P58872 AC010653.1-201ENST00000571108 881 ntBASIC3.82□□□□□ -1.8
RHBDL3P58872 MIR3913-1-201ENST00000577744 102 ntBASIC3.82□□□□□ -1.8
RHBDL3P58872 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.82□□□□□ -1.8
RHBDL3P58872 AC098848.2-201ENST00000588023 330 ntBASIC3.82□□□□□ -1.8
RHBDL3P58872 MTND4LP5-201ENST00000605152 292 ntBASIC3.82□□□□□ -1.8
RHBDL3P58872 AL162274.2-201ENST00000614406 332 ntBASIC3.82□□□□□ -1.8
RHBDL3P58872 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RHBDL3P58872 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RHBDL3P58872 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
RHBDL3P58872 AC110491.1-201ENST00000562191 2010 ntBASIC3.82□□□□□ -1.8
RHBDL3P58872 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RHBDL3P58872 ELF2P3-201ENST00000445099 1506 ntBASIC3.81□□□□□ -1.8
RHBDL3P58872 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RHBDL3P58872 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.81□□□□□ -1.8
RHBDL3P58872 RNU6-179P-201ENST00000363350 107 ntBASIC3.81□□□□□ -1.8
RHBDL3P58872 RNU6-108P-201ENST00000365558 107 ntBASIC3.81□□□□□ -1.8
RHBDL3P58872 SNORA54-201ENST00000384281 123 ntBASIC3.81□□□□□ -1.8
RHBDL3P58872 Y_RNA.534-201ENST00000384599 112 ntBASIC3.81□□□□□ -1.8
RHBDL3P58872 RNU6-195P-201ENST00000411352 109 ntBASIC3.81□□□□□ -1.8
RHBDL3P58872 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.81□□□□□ -1.8
RHBDL3P58872 AL358075.3-201ENST00000426289 226 ntBASIC3.81□□□□□ -1.8
RHBDL3P58872 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.81□□□□□ -1.8
RHBDL3P58872 MTCO3P5-201ENST00000433620 714 ntBASIC3.81□□□□□ -1.8
RHBDL3P58872 RPS15AP5-201ENST00000436276 388 ntBASIC3.81□□□□□ -1.8
RHBDL3P58872 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.81□□□□□ -1.8
RHBDL3P58872 DPPA3P1-201ENST00000448050 469 ntBASIC3.81□□□□□ -1.8
RHBDL3P58872 AC003071.1-201ENST00000451219 789 ntBASIC3.81□□□□□ -1.8
RHBDL3P58872 KLF3P2-201ENST00000465138 268 ntBASIC3.81□□□□□ -1.8
RHBDL3P58872 AC126389.1-201ENST00000477436 290 ntBASIC3.81□□□□□ -1.8
RHBDL3P58872 AC126182.1-201ENST00000478134 357 ntBASIC3.81□□□□□ -1.8
RHBDL3P58872 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.81□□□□□ -1.8
RHBDL3P58872 AC108078.2-201ENST00000510750 236 ntBASIC3.81□□□□□ -1.8
RHBDL3P58872 Y_RNA.689-201ENST00000516589 107 ntBASIC3.81□□□□□ -1.8
RHBDL3P58872 RNU6-914P-201ENST00000516749 109 ntBASIC3.81□□□□□ -1.8
RHBDL3P58872 MTCO2P4-201ENST00000517968 247 ntBASIC3.81□□□□□ -1.8
RHBDL3P58872 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.81□□□□□ -1.8
RHBDL3P58872 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.81□□□□□ -1.8
RHBDL3P58872 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.81□□□□□ -1.8
RHBDL3P58872 AL355877.2-201ENST00000603670 358 ntBASIC3.81□□□□□ -1.8
RHBDL3P58872 AL033523.1-201ENST00000605153 153 ntBASIC3.81□□□□□ -1.8
RHBDL3P58872 AC005332.10-201ENST00000612725 619 ntBASIC3.81□□□□□ -1.8
RHBDL3P58872 Z99571.1-201ENST00000636677 394 ntBASIC3.81□□□□□ -1.8
RHBDL3P58872 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
RHBDL3P58872 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RHBDL3P58872 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
RHBDL3P58872 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RHBDL3P58872 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RHBDL3P58872 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.81□□□□□ -1.8
RHBDL3P58872 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.8□□□□□ -1.8
RHBDL3P58872 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.8□□□□□ -1.8
RHBDL3P58872 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.8□□□□□ -1.8
RHBDL3P58872 MTND4P35-201ENST00000604257 1375 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 MIR30E-201ENST00000362104 92 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 SNORA44-201ENST00000384584 132 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 MIR1289-1-201ENST00000408836 144 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.8□□□□□ -1.8
RHBDL3P58872 AC096649.2-201ENST00000416186 393 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 AL353729.1-201ENST00000425044 720 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 AC098614.2-201ENST00000426040 255 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 CALM2P2-201ENST00000428512 440 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 BRK1P2-201ENST00000442875 223 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.8□□□□□ -1.8
RHBDL3P58872 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.8□□□□□ -1.8
RHBDL3P58872 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms