Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 U8.12-201ENST00000384701 133 ntBASIC3.25□□□□□ -1.89
CDH12P55289 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.25□□□□□ -1.89
CDH12P55289 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.25□□□□□ -1.89
CDH12P55289 Y_RNA.615-201ENST00000410769 117 ntBASIC3.25□□□□□ -1.89
CDH12P55289 RNU6-1148P-201ENST00000410992 104 ntBASIC3.25□□□□□ -1.89
CDH12P55289 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH12P55289 NDUFB4P7-201ENST00000423198 363 ntBASIC3.25□□□□□ -1.89
CDH12P55289 RPL27AP8-201ENST00000424277 446 ntBASIC3.25□□□□□ -1.89
CDH12P55289 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH12P55289 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.25□□□□□ -1.89
CDH12P55289 SNRPEP8-201ENST00000442866 260 ntBASIC3.25□□□□□ -1.89
CDH12P55289 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.25□□□□□ -1.89
CDH12P55289 CBWD4P-201ENST00000445695 655 ntBASIC3.25□□□□□ -1.89
CDH12P55289 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH12P55289 PRDX3P3-201ENST00000447765 522 ntBASIC3.25□□□□□ -1.89
CDH12P55289 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH12P55289 U8.18-201ENST00000459285 133 ntBASIC3.25□□□□□ -1.89
CDH12P55289 RPL21P8-201ENST00000465083 535 ntBASIC3.25□□□□□ -1.89
CDH12P55289 RN7SL594P-201ENST00000470590 287 ntBASIC3.25□□□□□ -1.89
CDH12P55289 RPL31P60-201ENST00000478450 367 ntBASIC3.25□□□□□ -1.89
CDH12P55289 RPL21P99-201ENST00000480369 423 ntBASIC3.25□□□□□ -1.89
CDH12P55289 UBE2CP3-201ENST00000502715 450 ntBASIC3.25□□□□□ -1.89
CDH12P55289 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH12P55289 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.25□□□□□ -1.89
CDH12P55289 AC114781.4-201ENST00000513707 639 ntBASIC3.25□□□□□ -1.89
CDH12P55289 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH12P55289 RNU6-1256P-201ENST00000516539 103 ntBASIC3.25□□□□□ -1.89
CDH12P55289 RNU6-677P-201ENST00000516914 101 ntBASIC3.25□□□□□ -1.89
CDH12P55289 RANP9-201ENST00000519957 271 ntBASIC3.25□□□□□ -1.89
CDH12P55289 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH12P55289 AC004024.1-201ENST00000549244 247 ntBASIC3.25□□□□□ -1.89
CDH12P55289 ADI1P3-201ENST00000549509 470 ntBASIC3.25□□□□□ -1.89
CDH12P55289 AL118558.2-201ENST00000556294 238 ntBASIC3.25□□□□□ -1.89
CDH12P55289 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH12P55289 AC106900.2-201ENST00000604994 317 ntBASIC3.25□□□□□ -1.89
CDH12P55289 AL670379.4-201ENST00000605279 254 ntBASIC3.25□□□□□ -1.89
CDH12P55289 AC022893.3-201ENST00000607665 437 ntBASIC3.25□□□□□ -1.89
CDH12P55289 AL390240.1-201ENST00000612950 384 ntBASIC3.25□□□□□ -1.89
CDH12P55289 AC068724.3-201ENST00000625906 87 ntBASIC3.25□□□□□ -1.89
CDH12P55289 AC119674.1-207ENST00000641355 633 ntBASIC3.25□□□□□ -1.89
CDH12P55289 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDH12P55289 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
CDH12P55289 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CDH12P55289 AC058791.1-201ENST00000608412 3198 ntBASIC3.25□□□□□ -1.89
CDH12P55289 AL513302.2-201ENST00000562313 1842 ntBASIC3.25□□□□□ -1.89
CDH12P55289 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDH12P55289 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.25□□□□□ -1.89
CDH12P55289 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.25□□□□□ -1.89
CDH12P55289 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDH12P55289 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.24□□□□□ -1.89
CDH12P55289 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDH12P55289 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.24□□□□□ -1.89
CDH12P55289 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDH12P55289 CBX3P1-201ENST00000325243 554 ntBASIC3.24□□□□□ -1.89
CDH12P55289 PTMAP5-201ENST00000393073 333 ntBASIC3.24□□□□□ -1.89
CDH12P55289 CISD1P1-201ENST00000393907 327 ntBASIC3.24□□□□□ -1.89
CDH12P55289 AL162578.1-201ENST00000406202 378 ntBASIC3.24□□□□□ -1.89
CDH12P55289 RNU4-46P-201ENST00000410818 138 ntBASIC3.24□□□□□ -1.89
CDH12P55289 RN7SKP53-201ENST00000411337 315 ntBASIC3.24□□□□□ -1.89
CDH12P55289 RPS12P24-201ENST00000412619 387 ntBASIC3.24□□□□□ -1.89
CDH12P55289 Z85995.1-201ENST00000415547 335 ntBASIC3.24□□□□□ -1.89
CDH12P55289 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.24□□□□□ -1.89
CDH12P55289 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH12P55289 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH12P55289 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.24□□□□□ -1.89
CDH12P55289 ERLEC1P1-201ENST00000433806 578 ntBASIC3.24□□□□□ -1.89
CDH12P55289 AL591212.2-201ENST00000433923 257 ntBASIC3.24□□□□□ -1.89
CDH12P55289 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
CDH12P55289 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.24□□□□□ -1.89
CDH12P55289 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.24□□□□□ -1.89
CDH12P55289 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH12P55289 RPL7P5-201ENST00000471472 736 ntBASIC3.24□□□□□ -1.89
CDH12P55289 AC103987.1-201ENST00000473394 348 ntBASIC3.24□□□□□ -1.89
CDH12P55289 AC010486.1-201ENST00000511793 424 ntBASIC3.24□□□□□ -1.89
CDH12P55289 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH12P55289 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.24□□□□□ -1.89
CDH12P55289 RNU6-875P-201ENST00000516488 106 ntBASIC3.24□□□□□ -1.89
CDH12P55289 RNU6-1038P-201ENST00000516516 104 ntBASIC3.24□□□□□ -1.89
CDH12P55289 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.24□□□□□ -1.89
CDH12P55289 MIR2276-201ENST00000516886 89 ntBASIC3.24□□□□□ -1.89
CDH12P55289 RNA5SP471-201ENST00000516971 106 ntBASIC3.24□□□□□ -1.89
CDH12P55289 AL137161.1-201ENST00000532231 390 ntBASIC3.24□□□□□ -1.89
CDH12P55289 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.24□□□□□ -1.89
CDH12P55289 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH12P55289 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH12P55289 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH12P55289 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH12P55289 UBE2V2P2-201ENST00000587677 504 ntBASIC3.24□□□□□ -1.89
CDH12P55289 AP002826.1-201ENST00000608835 315 ntBASIC3.24□□□□□ -1.89
CDH12P55289 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.24□□□□□ -1.89
CDH12P55289 AC034102.8-201ENST00000615146 484 ntBASIC3.24□□□□□ -1.89
CDH12P55289 uc_338.34-201ENST00000617467 174 ntBASIC3.24□□□□□ -1.89
CDH12P55289 AP003355.3-201ENST00000623465 114 ntBASIC3.24□□□□□ -1.89
CDH12P55289 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.24□□□□□ -1.89
CDH12P55289 MIR7153-201ENST00000637758 57 ntBASIC3.24□□□□□ -1.89
CDH12P55289 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDH12P55289 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CDH12P55289 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDH12P55289 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH12P55289 RNU1-75P-201ENST00000347264 129 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms