Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC009570.1-201ENST00000609599 745 ntBASIC3□□□□□ -1.93
PDX1P52945 5S_rRNA.12-201ENST00000617631 107 ntBASIC3□□□□□ -1.93
PDX1P52945 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3□□□□□ -1.93
PDX1P52945 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3□□□□□ -1.93
PDX1P52945 MIR622-201ENST00000638396 96 ntBASIC3□□□□□ -1.93
PDX1P52945 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PDX1P52945 AC004972.1-201ENST00000623934 2209 ntBASIC3□□□□□ -1.93
PDX1P52945 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3□□□□□ -1.93
PDX1P52945 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
PDX1P52945 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
PDX1P52945 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.99□□□□□ -1.93
PDX1P52945 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.99□□□□□ -1.93
PDX1P52945 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
PDX1P52945 RNA5SP383-201ENST00000362934 120 ntBASIC2.99□□□□□ -1.93
PDX1P52945 RNU6-181P-201ENST00000363225 107 ntBASIC2.99□□□□□ -1.93
PDX1P52945 RNU6-259P-201ENST00000383999 107 ntBASIC2.99□□□□□ -1.93
PDX1P52945 RNU6-14P-201ENST00000384630 106 ntBASIC2.99□□□□□ -1.93
PDX1P52945 MIR558-201ENST00000384920 94 ntBASIC2.99□□□□□ -1.93
PDX1P52945 PIGFP2-201ENST00000421400 651 ntBASIC2.99□□□□□ -1.93
PDX1P52945 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.99□□□□□ -1.93
PDX1P52945 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.99□□□□□ -1.93
PDX1P52945 RAC1P6-201ENST00000423911 575 ntBASIC2.99□□□□□ -1.93
PDX1P52945 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.99□□□□□ -1.93
PDX1P52945 AL451074.3-201ENST00000437709 472 ntBASIC2.99□□□□□ -1.93
PDX1P52945 AC009237.8-201ENST00000445492 379 ntBASIC2.99□□□□□ -1.93
PDX1P52945 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.99□□□□□ -1.93
PDX1P52945 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.99□□□□□ -1.93
PDX1P52945 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.99□□□□□ -1.93
PDX1P52945 SNORD97-201ENST00000459187 142 ntBASIC2.99□□□□□ -1.93
PDX1P52945 RN7SL432P-201ENST00000484057 298 ntBASIC2.99□□□□□ -1.93
PDX1P52945 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.99□□□□□ -1.93
PDX1P52945 AC108078.1-201ENST00000508073 725 ntBASIC2.99□□□□□ -1.93
PDX1P52945 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.99□□□□□ -1.93
PDX1P52945 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.99□□□□□ -1.93
PDX1P52945 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.99□□□□□ -1.93
PDX1P52945 RNU2-10P-201ENST00000516375 211 ntBASIC2.99□□□□□ -1.93
PDX1P52945 RNU6-445P-201ENST00000516949 107 ntBASIC2.99□□□□□ -1.93
PDX1P52945 RNA5SP471-201ENST00000516971 106 ntBASIC2.99□□□□□ -1.93
PDX1P52945 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
PDX1P52945 AC093331.1-201ENST00000521474 169 ntBASIC2.99□□□□□ -1.93
PDX1P52945 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PDX1P52945 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.99□□□□□ -1.93
PDX1P52945 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.99□□□□□ -1.93
PDX1P52945 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.99□□□□□ -1.93
PDX1P52945 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.99□□□□□ -1.93
PDX1P52945 H3F3AP1-201ENST00000559984 334 ntBASIC2.99□□□□□ -1.93
PDX1P52945 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.99□□□□□ -1.93
PDX1P52945 RPL23AP84-201ENST00000571193 464 ntBASIC2.99□□□□□ -1.93
PDX1P52945 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.99□□□□□ -1.93
PDX1P52945 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.99□□□□□ -1.93
PDX1P52945 AC002545.1-201ENST00000592511 181 ntBASIC2.99□□□□□ -1.93
PDX1P52945 AC068790.2-201ENST00000602601 557 ntBASIC2.99□□□□□ -1.93
PDX1P52945 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.99□□□□□ -1.93
PDX1P52945 AC084782.3-201ENST00000612282 578 ntBASIC2.99□□□□□ -1.93
PDX1P52945 AC015540.1-201ENST00000615828 501 ntBASIC2.99□□□□□ -1.93
PDX1P52945 AC138649.3-201ENST00000622154 254 ntBASIC2.99□□□□□ -1.93
PDX1P52945 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.99□□□□□ -1.93
PDX1P52945 AC084035.1-201ENST00000634543 607 ntBASIC2.99□□□□□ -1.93
PDX1P52945 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PDX1P52945 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.99□□□□□ -1.93
PDX1P52945 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PDX1P52945 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
PDX1P52945 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PDX1P52945 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.98□□□□□ -1.93
PDX1P52945 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.98□□□□□ -1.93
PDX1P52945 AL365361.1-201ENST00000566942 3481 ntBASIC2.98□□□□□ -1.93
PDX1P52945 SRP72P2-201ENST00000344851 1979 ntBASIC2.98□□□□□ -1.93
PDX1P52945 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.98□□□□□ -1.93
PDX1P52945 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.98□□□□□ -1.93
PDX1P52945 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PDX1P52945 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PDX1P52945 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PDX1P52945 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.98□□□□□ -1.93
PDX1P52945 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.98□□□□□ -1.93
PDX1P52945 ZNF90P2-204ENST00000419323 1075 ntBASIC2.98□□□□□ -1.93
PDX1P52945 AC007919.1-201ENST00000429380 217 ntBASIC2.98□□□□□ -1.93
PDX1P52945 AL356867.1-201ENST00000429623 299 ntBASIC2.98□□□□□ -1.93
PDX1P52945 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.98□□□□□ -1.93
PDX1P52945 NEK4P1-201ENST00000433383 879 ntBASIC2.98□□□□□ -1.93
PDX1P52945 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.98□□□□□ -1.93
PDX1P52945 SETP5-201ENST00000437270 562 ntBASIC2.98□□□□□ -1.93
PDX1P52945 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.98□□□□□ -1.93
PDX1P52945 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PDX1P52945 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.98□□□□□ -1.93
PDX1P52945 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.98□□□□□ -1.93
PDX1P52945 RPL21P8-201ENST00000465083 535 ntBASIC2.98□□□□□ -1.93
PDX1P52945 RPS3AP17-201ENST00000472594 777 ntBASIC2.98□□□□□ -1.93
PDX1P52945 RPS20P22-201ENST00000473700 357 ntBASIC2.98□□□□□ -1.93
PDX1P52945 AC091826.1-201ENST00000514065 313 ntBASIC2.98□□□□□ -1.93
PDX1P52945 RNA5SP217-201ENST00000515959 91 ntBASIC2.98□□□□□ -1.93
PDX1P52945 SNORA31.3-201ENST00000516029 96 ntBASIC2.98□□□□□ -1.93
PDX1P52945 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.98□□□□□ -1.93
PDX1P52945 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.98□□□□□ -1.93
PDX1P52945 AC008962.1-201ENST00000605729 304 ntBASIC2.98□□□□□ -1.93
PDX1P52945 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.98□□□□□ -1.93
PDX1P52945 AC007998.5-201ENST00000622938 237 ntBASIC2.98□□□□□ -1.93
PDX1P52945 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.98□□□□□ -1.93
PDX1P52945 AC002546.1-201ENST00000588041 2504 ntBASIC2.98□□□□□ -1.93
PDX1P52945 AC090740.1-201ENST00000623193 2262 ntBASIC2.98□□□□□ -1.93
PDX1P52945 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms