Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 ELF2P3-201ENST00000445099 1506 ntBASIC3.37□□□□□ -1.87
CLCN3P51790 AC093908.1-201ENST00000623125 8092 ntBASIC3.36□□□□□ -1.87
CLCN3P51790 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CLCN3P51790 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.36□□□□□ -1.87
CLCN3P51790 AL137003.2-201ENST00000606924 2538 ntBASIC3.36□□□□□ -1.87
CLCN3P51790 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
CLCN3P51790 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.36□□□□□ -1.87
CLCN3P51790 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLCN3P51790 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.36□□□□□ -1.87
CLCN3P51790 AC073325.2-201ENST00000339545 159 ntBASIC3.36□□□□□ -1.87
CLCN3P51790 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLCN3P51790 SNORA80A-201ENST00000363922 136 ntBASIC3.36□□□□□ -1.87
CLCN3P51790 Y_RNA.256-201ENST00000364594 104 ntBASIC3.36□□□□□ -1.87
CLCN3P51790 MTCO3P40-201ENST00000392516 676 ntBASIC3.36□□□□□ -1.87
CLCN3P51790 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLCN3P51790 U3.42-201ENST00000408746 214 ntBASIC3.36□□□□□ -1.87
CLCN3P51790 RNU6-195P-201ENST00000411352 109 ntBASIC3.36□□□□□ -1.87
CLCN3P51790 AC022028.1-201ENST00000412054 408 ntBASIC3.36□□□□□ -1.87
CLCN3P51790 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.36□□□□□ -1.87
CLCN3P51790 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.36□□□□□ -1.87
CLCN3P51790 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.36□□□□□ -1.87
CLCN3P51790 TIMM9P3-201ENST00000428659 274 ntBASIC3.36□□□□□ -1.87
CLCN3P51790 AL358934.1-201ENST00000432346 324 ntBASIC3.36□□□□□ -1.87
CLCN3P51790 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.36□□□□□ -1.87
CLCN3P51790 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.36□□□□□ -1.87
CLCN3P51790 ARPC3P1-201ENST00000437218 533 ntBASIC3.36□□□□□ -1.87
CLCN3P51790 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
CLCN3P51790 AC020550.1-201ENST00000447385 163 ntBASIC3.36□□□□□ -1.87
CLCN3P51790 GAPDHP27-201ENST00000447427 1020 ntBASIC3.36□□□□□ -1.87
CLCN3P51790 AC117440.1-201ENST00000474107 571 ntBASIC3.36□□□□□ -1.87
CLCN3P51790 RPS29P26-201ENST00000477483 171 ntBASIC3.36□□□□□ -1.87
CLCN3P51790 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.36□□□□□ -1.87
CLCN3P51790 NRON-201ENST00000517270 370 ntBASIC3.36□□□□□ -1.87
CLCN3P51790 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.36□□□□□ -1.87
CLCN3P51790 RPS3AP4-201ENST00000555161 764 ntBASIC3.36□□□□□ -1.87
CLCN3P51790 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.36□□□□□ -1.87
CLCN3P51790 AC234778.2-201ENST00000566241 354 ntBASIC3.36□□□□□ -1.87
CLCN3P51790 SNORA59B-202ENST00000578183 701 ntBASIC3.36□□□□□ -1.87
CLCN3P51790 AP000860.1-201ENST00000605250 559 ntBASIC3.36□□□□□ -1.87
CLCN3P51790 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.36□□□□□ -1.87
CLCN3P51790 AC007014.2-201ENST00000615581 479 ntBASIC3.36□□□□□ -1.87
CLCN3P51790 AC006338.1-201ENST00000618453 749 ntBASIC3.36□□□□□ -1.87
CLCN3P51790 AL158209.2-201ENST00000619266 216 ntBASIC3.36□□□□□ -1.87
CLCN3P51790 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.36□□□□□ -1.87
CLCN3P51790 AC110994.2-201ENST00000635481 492 ntBASIC3.36□□□□□ -1.87
CLCN3P51790 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLCN3P51790 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLCN3P51790 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLCN3P51790 AC000403.1-201ENST00000613696 3585 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLCN3P51790 Y_RNA.111-201ENST00000363248 100 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCN3P51790 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCN3P51790 Y_RNA.450-201ENST00000384198 113 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 RNY3P14-201ENST00000384309 102 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CLCN3P51790 RPS3AP36-201ENST00000398190 775 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 AL513331.1-201ENST00000411908 397 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 BX295541.1-201ENST00000417774 250 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 ZNF90P2-204ENST00000419323 1075 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 AL451054.2-201ENST00000420896 202 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLCN3P51790 MTCO2P19-201ENST00000427513 598 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 AC022018.1-201ENST00000430685 241 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 AL139415.2-201ENST00000431968 163 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 AL596276.1-201ENST00000434465 418 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCN3P51790 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCN3P51790 AC132479.1-201ENST00000449160 144 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCN3P51790 MTND2P24-201ENST00000453434 806 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCN3P51790 RPS23P3-201ENST00000470993 430 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 FAM92A1P2-202ENST00000504766 877 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 AC116353.2-201ENST00000505332 712 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 RNU6-718P-201ENST00000516166 105 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.35□□□□□ -1.87
CLCN3P51790 AP001893.2-201ENST00000526949 202 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCN3P51790 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCN3P51790 AL670379.6-201ENST00000603753 252 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 AL391646.1-201ENST00000603860 190 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 AL670379.11-201ENST00000604059 253 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 AC008162.1-201ENST00000604718 254 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 AL670379.1-201ENST00000604752 252 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 AL670379.5-201ENST00000605253 252 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 AL670379.12-201ENST00000605291 253 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 AL670379.8-201ENST00000605353 252 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 AL670379.7-201ENST00000605823 252 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 AL591516.1-201ENST00000611326 274 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 AL390240.1-201ENST00000612950 384 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 AC090132.2-201ENST00000615881 347 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 MIR3688-2-201ENST00000636963 87 ntBASIC3.35□□□□□ -1.87
CLCN3P51790 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
CLCN3P51790 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
CLCN3P51790 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLCN3P51790 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLCN3P51790 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLCN3P51790 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CLCN3P51790 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms