Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.9□□□□□ -1.63
USP11P51784 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.9□□□□□ -1.63
USP11P51784 AL592156.1-201ENST00000508758 304 ntBASIC4.9□□□□□ -1.63
USP11P51784 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.9□□□□□ -1.63
USP11P51784 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.9□□□□□ -1.63
USP11P51784 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
USP11P51784 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.9□□□□□ -1.63
USP11P51784 AC007619.2-201ENST00000605743 379 ntBASIC4.9□□□□□ -1.63
USP11P51784 AL138721.1-201ENST00000616756 179 ntBASIC4.9□□□□□ -1.63
USP11P51784 PABPC1P7-201ENST00000413177 1513 ntBASIC4.9□□□□□ -1.63
USP11P51784 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
USP11P51784 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
USP11P51784 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
USP11P51784 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
USP11P51784 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.9□□□□□ -1.63
USP11P51784 NEAT1-202ENST00000501122 22743 ntBASIC4.9□□□□□ -1.63
USP11P51784 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
USP11P51784 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
USP11P51784 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
USP11P51784 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
USP11P51784 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
USP11P51784 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
USP11P51784 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.89□□□□□ -1.63
USP11P51784 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
USP11P51784 SNORA70.2-201ENST00000364506 135 ntBASIC4.89□□□□□ -1.63
USP11P51784 RNU6-1329P-201ENST00000365664 107 ntBASIC4.89□□□□□ -1.63
USP11P51784 RNU6-45P-201ENST00000384471 107 ntBASIC4.89□□□□□ -1.63
USP11P51784 RNU6-14P-201ENST00000384630 106 ntBASIC4.89□□□□□ -1.63
USP11P51784 SNORD66.1-201ENST00000391230 76 ntBASIC4.89□□□□□ -1.63
USP11P51784 RNU2-14P-201ENST00000411053 191 ntBASIC4.89□□□□□ -1.63
USP11P51784 RPL7P2-201ENST00000427639 268 ntBASIC4.89□□□□□ -1.63
USP11P51784 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.89□□□□□ -1.63
USP11P51784 ABCF2P2-201ENST00000450549 296 ntBASIC4.89□□□□□ -1.63
USP11P51784 OR2AQ1P-201ENST00000451972 200 ntBASIC4.89□□□□□ -1.63
USP11P51784 MTCO3P8-201ENST00000453691 755 ntBASIC4.89□□□□□ -1.63
USP11P51784 RPL23AP31-201ENST00000456160 467 ntBASIC4.89□□□□□ -1.63
USP11P51784 HMGB1P25-201ENST00000468402 607 ntBASIC4.89□□□□□ -1.63
USP11P51784 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.89□□□□□ -1.63
USP11P51784 RNA5SP49-201ENST00000516450 115 ntBASIC4.89□□□□□ -1.63
USP11P51784 RNU6-182P-201ENST00000516970 105 ntBASIC4.89□□□□□ -1.63
USP11P51784 RNU6-570P-201ENST00000517051 105 ntBASIC4.89□□□□□ -1.63
USP11P51784 RNU6-897P-201ENST00000517135 105 ntBASIC4.89□□□□□ -1.63
USP11P51784 HMGN1P28-201ENST00000521340 364 ntBASIC4.89□□□□□ -1.63
USP11P51784 AC022790.1-201ENST00000522872 204 ntBASIC4.89□□□□□ -1.63
USP11P51784 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.89□□□□□ -1.63
USP11P51784 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.89□□□□□ -1.63
USP11P51784 AC068446.3-201ENST00000555285 382 ntBASIC4.89□□□□□ -1.63
USP11P51784 PARP1P2-201ENST00000556806 195 ntBASIC4.89□□□□□ -1.63
USP11P51784 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.89□□□□□ -1.63
USP11P51784 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.89□□□□□ -1.63
USP11P51784 AC007390.2-201ENST00000606229 3803 ntBASIC4.89□□□□□ -1.63
USP11P51784 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.89□□□□□ -1.63
USP11P51784 FAM27D1-201ENST00000612308 341 ntBASIC4.89□□□□□ -1.63
USP11P51784 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
USP11P51784 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.89□□□□□ -1.63
USP11P51784 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
USP11P51784 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
USP11P51784 AL359893.1-201ENST00000447628 1580 ntBASIC4.89□□□□□ -1.63
USP11P51784 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.88□□□□□ -1.63
USP11P51784 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
USP11P51784 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
USP11P51784 RNU1-14P-201ENST00000362759 152 ntBASIC4.88□□□□□ -1.63
USP11P51784 RNA5SP28-201ENST00000363841 119 ntBASIC4.88□□□□□ -1.63
USP11P51784 Y_RNA.180-201ENST00000363867 113 ntBASIC4.88□□□□□ -1.63
USP11P51784 AC068538.1-201ENST00000376856 336 ntBASIC4.88□□□□□ -1.63
USP11P51784 Y_RNA.462-201ENST00000384268 102 ntBASIC4.88□□□□□ -1.63
USP11P51784 Y_RNA.478-201ENST00000384358 107 ntBASIC4.88□□□□□ -1.63
USP11P51784 LAP3P1-201ENST00000403648 294 ntBASIC4.88□□□□□ -1.63
USP11P51784 MTATP6P29-201ENST00000415057 132 ntBASIC4.88□□□□□ -1.63
USP11P51784 AL138785.1-201ENST00000425821 331 ntBASIC4.88□□□□□ -1.63
USP11P51784 AC008958.1-201ENST00000511047 682 ntBASIC4.88□□□□□ -1.63
USP11P51784 RNU6-397P-201ENST00000516226 104 ntBASIC4.88□□□□□ -1.63
USP11P51784 AC007991.1-201ENST00000522680 631 ntBASIC4.88□□□□□ -1.63
USP11P51784 ERHP1-201ENST00000523006 310 ntBASIC4.88□□□□□ -1.63
USP11P51784 AC104576.1-201ENST00000524225 88 ntBASIC4.88□□□□□ -1.63
USP11P51784 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.88□□□□□ -1.63
USP11P51784 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.88□□□□□ -1.63
USP11P51784 AC100770.1-201ENST00000532310 322 ntBASIC4.88□□□□□ -1.63
USP11P51784 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.88□□□□□ -1.63
USP11P51784 AC006064.5-201ENST00000541782 248 ntBASIC4.88□□□□□ -1.63
USP11P51784 CR383656.7-201ENST00000548164 174 ntBASIC4.88□□□□□ -1.63
USP11P51784 AC006600.1-201ENST00000572529 153 ntBASIC4.88□□□□□ -1.63
USP11P51784 AC067852.3-201ENST00000589177 561 ntBASIC4.88□□□□□ -1.63
USP11P51784 AC006329.2-201ENST00000611491 394 ntBASIC4.88□□□□□ -1.63
USP11P51784 AL138825.1-201ENST00000618587 192 ntBASIC4.88□□□□□ -1.63
USP11P51784 FTX_2.1-201ENST00000618816 94 ntBASIC4.88□□□□□ -1.63
USP11P51784 MIR3653-201ENST00000625572 110 ntBASIC4.88□□□□□ -1.63
USP11P51784 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
USP11P51784 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
USP11P51784 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
USP11P51784 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
USP11P51784 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
USP11P51784 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
USP11P51784 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
USP11P51784 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.87□□□□□ -1.63
USP11P51784 Y_RNA.105-201ENST00000363182 111 ntBASIC4.87□□□□□ -1.63
USP11P51784 RNU6-774P-201ENST00000363238 107 ntBASIC4.87□□□□□ -1.63
USP11P51784 RNU6-371P-201ENST00000364283 108 ntBASIC4.87□□□□□ -1.63
USP11P51784 Y_RNA.539-201ENST00000384635 107 ntBASIC4.87□□□□□ -1.63
USP11P51784 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms