Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.11□□□□□ -1.91
CLK1P49759 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.11□□□□□ -1.91
CLK1P49759 AC013267.1-201ENST00000458227 267 ntBASIC3.11□□□□□ -1.91
CLK1P49759 RPS20P22-201ENST00000473700 357 ntBASIC3.11□□□□□ -1.91
CLK1P49759 AC104563.1-201ENST00000476147 376 ntBASIC3.11□□□□□ -1.91
CLK1P49759 FCF1P8-201ENST00000510322 597 ntBASIC3.11□□□□□ -1.91
CLK1P49759 AC008716.1-201ENST00000511084 513 ntBASIC3.11□□□□□ -1.91
CLK1P49759 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.11□□□□□ -1.91
CLK1P49759 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.11□□□□□ -1.91
CLK1P49759 AC137800.2-201ENST00000574375 120 ntBASIC3.11□□□□□ -1.91
CLK1P49759 MIR3158-1-201ENST00000583596 81 ntBASIC3.11□□□□□ -1.91
CLK1P49759 AC011471.1-201ENST00000585766 187 ntBASIC3.11□□□□□ -1.91
CLK1P49759 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.11□□□□□ -1.91
CLK1P49759 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.11□□□□□ -1.91
CLK1P49759 TPMTP1-201ENST00000592307 737 ntBASIC3.11□□□□□ -1.91
CLK1P49759 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.11□□□□□ -1.91
CLK1P49759 U3.45-201ENST00000607547 219 ntBASIC3.11□□□□□ -1.91
CLK1P49759 AL449363.1-201ENST00000617815 186 ntBASIC3.11□□□□□ -1.91
CLK1P49759 AL356321.1-201ENST00000621360 228 ntBASIC3.11□□□□□ -1.91
CLK1P49759 AC124864.2-201ENST00000624736 186 ntBASIC3.11□□□□□ -1.91
CLK1P49759 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.11□□□□□ -1.91
CLK1P49759 AC004520.1-201ENST00000608362 1413 ntBASIC3.1□□□□□ -1.91
CLK1P49759 AC008264.2-201ENST00000610193 3731 ntBASIC3.1□□□□□ -1.91
CLK1P49759 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
CLK1P49759 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.1□□□□□ -1.91
CLK1P49759 FARSBP1-201ENST00000435808 1778 ntBASIC3.1□□□□□ -1.91
CLK1P49759 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.1□□□□□ -1.91
CLK1P49759 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLK1P49759 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.1□□□□□ -1.91
CLK1P49759 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.1□□□□□ -1.91
CLK1P49759 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLK1P49759 Y_RNA.88-201ENST00000363029 99 ntBASIC3.1□□□□□ -1.91
CLK1P49759 VTRNA1-1-201ENST00000363120 99 ntBASIC3.1□□□□□ -1.91
CLK1P49759 RNU6-461P-201ENST00000364195 107 ntBASIC3.1□□□□□ -1.91
CLK1P49759 Y_RNA.256-201ENST00000364594 104 ntBASIC3.1□□□□□ -1.91
CLK1P49759 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CLK1P49759 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.1□□□□□ -1.91
CLK1P49759 AL512633.1-201ENST00000399931 655 ntBASIC3.1□□□□□ -1.91
CLK1P49759 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.1□□□□□ -1.91
CLK1P49759 CIR1P3-201ENST00000405137 479 ntBASIC3.1□□□□□ -1.91
CLK1P49759 BTF3P7-201ENST00000407097 488 ntBASIC3.1□□□□□ -1.91
CLK1P49759 RNU6-195P-201ENST00000411352 109 ntBASIC3.1□□□□□ -1.91
CLK1P49759 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.1□□□□□ -1.91
CLK1P49759 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.1□□□□□ -1.91
CLK1P49759 RPL32P35-201ENST00000415214 394 ntBASIC3.1□□□□□ -1.91
CLK1P49759 DBIP2-201ENST00000419076 262 ntBASIC3.1□□□□□ -1.91
CLK1P49759 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.1□□□□□ -1.91
CLK1P49759 AL589872.1-201ENST00000426602 288 ntBASIC3.1□□□□□ -1.91
CLK1P49759 AC007919.1-201ENST00000429380 217 ntBASIC3.1□□□□□ -1.91
CLK1P49759 ATP5JP1-201ENST00000431631 322 ntBASIC3.1□□□□□ -1.91
CLK1P49759 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.1□□□□□ -1.91
CLK1P49759 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.1□□□□□ -1.91
CLK1P49759 AL445687.1-201ENST00000439946 251 ntBASIC3.1□□□□□ -1.91
CLK1P49759 AL353572.1-201ENST00000442490 417 ntBASIC3.1□□□□□ -1.91
CLK1P49759 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.1□□□□□ -1.91
CLK1P49759 AC008264.1-201ENST00000447612 367 ntBASIC3.1□□□□□ -1.91
CLK1P49759 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.1□□□□□ -1.91
CLK1P49759 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.1□□□□□ -1.91
CLK1P49759 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.1□□□□□ -1.91
CLK1P49759 RPS3AP17-201ENST00000472594 777 ntBASIC3.1□□□□□ -1.91
CLK1P49759 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.1□□□□□ -1.91
CLK1P49759 RNA5SP217-201ENST00000515959 91 ntBASIC3.1□□□□□ -1.91
CLK1P49759 RNU6-314P-201ENST00000516574 104 ntBASIC3.1□□□□□ -1.91
CLK1P49759 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.1□□□□□ -1.91
CLK1P49759 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.1□□□□□ -1.91
CLK1P49759 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.1□□□□□ -1.91
CLK1P49759 AL391261.3-201ENST00000557194 520 ntBASIC3.1□□□□□ -1.91
CLK1P49759 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.1□□□□□ -1.91
CLK1P49759 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
CLK1P49759 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.1□□□□□ -1.91
CLK1P49759 AC002545.1-201ENST00000592511 181 ntBASIC3.1□□□□□ -1.91
CLK1P49759 AC090970.3-201ENST00000612566 866 ntBASIC3.1□□□□□ -1.91
CLK1P49759 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.1□□□□□ -1.91
CLK1P49759 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.1□□□□□ -1.91
CLK1P49759 AC073534.2-201ENST00000620377 381 ntBASIC3.1□□□□□ -1.91
CLK1P49759 PISRT1-201ENST00000626175 531 ntBASIC3.1□□□□□ -1.91
CLK1P49759 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CLK1P49759 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLK1P49759 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLK1P49759 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CLK1P49759 AC092447.10-201ENST00000620607 1652 ntBASIC3.09□□□□□ -1.91
CLK1P49759 AL137003.2-201ENST00000606924 2538 ntBASIC3.09□□□□□ -1.91
CLK1P49759 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.09□□□□□ -1.91
CLK1P49759 Y_RNA.390-201ENST00000383932 102 ntBASIC3.09□□□□□ -1.91
CLK1P49759 AC078974.1-201ENST00000411597 223 ntBASIC3.09□□□□□ -1.91
CLK1P49759 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.09□□□□□ -1.91
CLK1P49759 BX295541.1-201ENST00000417774 250 ntBASIC3.09□□□□□ -1.91
CLK1P49759 AL358934.1-201ENST00000432346 324 ntBASIC3.09□□□□□ -1.91
CLK1P49759 AC000111.3-201ENST00000433478 193 ntBASIC3.09□□□□□ -1.91
CLK1P49759 PRDX3P3-201ENST00000447765 522 ntBASIC3.09□□□□□ -1.91
CLK1P49759 Z99127.3-201ENST00000448158 395 ntBASIC3.09□□□□□ -1.91
CLK1P49759 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.09□□□□□ -1.91
CLK1P49759 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CLK1P49759 FTH1P2-201ENST00000466086 412 ntBASIC3.09□□□□□ -1.91
CLK1P49759 MTND1P3-201ENST00000484956 952 ntBASIC3.09□□□□□ -1.91
CLK1P49759 SUMO2P6-201ENST00000505273 288 ntBASIC3.09□□□□□ -1.91
CLK1P49759 SNORA67.7-201ENST00000516664 135 ntBASIC3.09□□□□□ -1.91
CLK1P49759 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.09□□□□□ -1.91
CLK1P49759 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLK1P49759 AP003181.2-201ENST00000528941 181 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms