Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.25□□□□□ -2.05
RFX3P48380 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.25□□□□□ -2.05
RFX3P48380 AC135628.1-201ENST00000568867 534 ntBASIC2.25□□□□□ -2.05
RFX3P48380 BNIP3P39-201ENST00000601077 554 ntBASIC2.25□□□□□ -2.05
RFX3P48380 AC021171.1-201ENST00000603137 706 ntBASIC2.25□□□□□ -2.05
RFX3P48380 AL589743.7-201ENST00000612637 233 ntBASIC2.25□□□□□ -2.05
RFX3P48380 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.25□□□□□ -2.05
RFX3P48380 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
RFX3P48380 MTND5P33-201ENST00000571250 1450 ntBASIC2.25□□□□□ -2.05
RFX3P48380 AC069528.2-201ENST00000624849 1991 ntBASIC2.25□□□□□ -2.05
RFX3P48380 AC004520.1-201ENST00000608362 1413 ntBASIC2.25□□□□□ -2.05
RFX3P48380 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
RFX3P48380 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.24□□□□□ -2.05
RFX3P48380 SNORD114-30-201ENST00000364448 72 ntBASIC2.24□□□□□ -2.05
RFX3P48380 RNU6-301P-201ENST00000384277 107 ntBASIC2.24□□□□□ -2.05
RFX3P48380 RNU6-83P-201ENST00000384568 112 ntBASIC2.24□□□□□ -2.05
RFX3P48380 SNORA80E-201ENST00000384744 137 ntBASIC2.24□□□□□ -2.05
RFX3P48380 RNU6-220P-201ENST00000390919 107 ntBASIC2.24□□□□□ -2.05
RFX3P48380 AL139397.2-201ENST00000404529 772 ntBASIC2.24□□□□□ -2.05
RFX3P48380 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.24□□□□□ -2.05
RFX3P48380 AL109913.1-201ENST00000421173 514 ntBASIC2.24□□□□□ -2.05
RFX3P48380 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.24□□□□□ -2.05
RFX3P48380 ELOCP14-201ENST00000428070 331 ntBASIC2.24□□□□□ -2.05
RFX3P48380 MED14P1-201ENST00000430517 648 ntBASIC2.24□□□□□ -2.05
RFX3P48380 ELOCP7-201ENST00000439968 331 ntBASIC2.24□□□□□ -2.05
RFX3P48380 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.24□□□□□ -2.05
RFX3P48380 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.24□□□□□ -2.05
RFX3P48380 AL513328.1-201ENST00000446460 224 ntBASIC2.24□□□□□ -2.05
RFX3P48380 CECR9-201ENST00000453421 199 ntBASIC2.24□□□□□ -2.05
RFX3P48380 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.24□□□□□ -2.05
RFX3P48380 AC013267.1-201ENST00000458227 267 ntBASIC2.24□□□□□ -2.05
RFX3P48380 RN7SL429P-201ENST00000479090 223 ntBASIC2.24□□□□□ -2.05
RFX3P48380 RN7SL489P-201ENST00000486185 223 ntBASIC2.24□□□□□ -2.05
RFX3P48380 RN7SL327P-201ENST00000488659 223 ntBASIC2.24□□□□□ -2.05
RFX3P48380 GTF2IP9-201ENST00000502460 301 ntBASIC2.24□□□□□ -2.05
RFX3P48380 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
RFX3P48380 AC114781.4-201ENST00000513707 639 ntBASIC2.24□□□□□ -2.05
RFX3P48380 SNORA31.6-201ENST00000516241 130 ntBASIC2.24□□□□□ -2.05
RFX3P48380 RNU6-390P-201ENST00000516259 103 ntBASIC2.24□□□□□ -2.05
RFX3P48380 RNU5A-4P-201ENST00000516588 111 ntBASIC2.24□□□□□ -2.05
RFX3P48380 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.24□□□□□ -2.05
RFX3P48380 BTF3P12-201ENST00000519620 469 ntBASIC2.24□□□□□ -2.05
RFX3P48380 AC023050.2-201ENST00000544968 387 ntBASIC2.24□□□□□ -2.05
RFX3P48380 AL049838.1-201ENST00000563647 981 ntBASIC2.24□□□□□ -2.05
RFX3P48380 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.24□□□□□ -2.05
RFX3P48380 MIR3616-201ENST00000584070 92 ntBASIC2.24□□□□□ -2.05
RFX3P48380 AC245884.10-201ENST00000597355 337 ntBASIC2.24□□□□□ -2.05
RFX3P48380 RN7SL853P-201ENST00000617250 223 ntBASIC2.24□□□□□ -2.05
RFX3P48380 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.24□□□□□ -2.05
RFX3P48380 AP002782.1-201ENST00000623107 614 ntBASIC2.24□□□□□ -2.05
RFX3P48380 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.24□□□□□ -2.05
RFX3P48380 U2.21-201ENST00000637295 81 ntBASIC2.24□□□□□ -2.05
RFX3P48380 AC010149.2-201ENST00000637608 315 ntBASIC2.24□□□□□ -2.05
RFX3P48380 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
RFX3P48380 AC010889.1-201ENST00000566193 2666 ntBASIC2.24□□□□□ -2.05
RFX3P48380 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RFX3P48380 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RFX3P48380 RNU6-778P-201ENST00000363269 103 ntBASIC2.23□□□□□ -2.05
RFX3P48380 SNORA41-201ENST00000384675 132 ntBASIC2.23□□□□□ -2.05
RFX3P48380 MIR518C-201ENST00000384822 101 ntBASIC2.23□□□□□ -2.05
RFX3P48380 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RFX3P48380 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.23□□□□□ -2.05
RFX3P48380 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.23□□□□□ -2.05
RFX3P48380 USP9YP26-201ENST00000421008 661 ntBASIC2.23□□□□□ -2.05
RFX3P48380 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.23□□□□□ -2.05
RFX3P48380 MTND1P32-201ENST00000433043 938 ntBASIC2.23□□□□□ -2.05
RFX3P48380 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.23□□□□□ -2.05
RFX3P48380 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.23□□□□□ -2.05
RFX3P48380 FAM103A2P-201ENST00000444122 354 ntBASIC2.23□□□□□ -2.05
RFX3P48380 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.23□□□□□ -2.05
RFX3P48380 OSTCP8-201ENST00000445117 448 ntBASIC2.23□□□□□ -2.05
RFX3P48380 ANKRD26P4-201ENST00000455755 950 ntBASIC2.23□□□□□ -2.05
RFX3P48380 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.23□□□□□ -2.05
RFX3P48380 RNU7-59P-201ENST00000459101 61 ntBASIC2.23□□□□□ -2.05
RFX3P48380 AC008481.1-201ENST00000463278 396 ntBASIC2.23□□□□□ -2.05
RFX3P48380 AC010631.1-201ENST00000474150 156 ntBASIC2.23□□□□□ -2.05
RFX3P48380 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.23□□□□□ -2.05
RFX3P48380 LINC00888-204ENST00000487386 421 ntBASIC2.23□□□□□ -2.05
RFX3P48380 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.23□□□□□ -2.05
RFX3P48380 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RFX3P48380 TPT1P8-201ENST00000510120 555 ntBASIC2.23□□□□□ -2.05
RFX3P48380 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.23□□□□□ -2.05
RFX3P48380 AC107222.1-201ENST00000510899 637 ntBASIC2.23□□□□□ -2.05
RFX3P48380 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.23□□□□□ -2.05
RFX3P48380 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.23□□□□□ -2.05
RFX3P48380 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.23□□□□□ -2.05
RFX3P48380 AC087241.2-201ENST00000535801 324 ntBASIC2.23□□□□□ -2.05
RFX3P48380 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.23□□□□□ -2.05
RFX3P48380 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RFX3P48380 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.23□□□□□ -2.05
RFX3P48380 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.23□□□□□ -2.05
RFX3P48380 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
RFX3P48380 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
RFX3P48380 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.23□□□□□ -2.05
RFX3P48380 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.23□□□□□ -2.05
RFX3P48380 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
RFX3P48380 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
RFX3P48380 MTND4P27-201ENST00000450813 1354 ntBASIC2.23□□□□□ -2.05
RFX3P48380 ELF2P3-201ENST00000445099 1506 ntBASIC2.22□□□□□ -2.05
RFX3P48380 RPL21P132-201ENST00000331267 462 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms