Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 Y_RNA.672-201ENST00000516289 104 ntBASIC2.57□□□□□ -2
ATRXP46100 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.57□□□□□ -2
ATRXP46100 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.57□□□□□ -2
ATRXP46100 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.57□□□□□ -2
ATRXP46100 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.57□□□□□ -2
ATRXP46100 NDUFA8P1-201ENST00000605525 367 ntBASIC2.57□□□□□ -2
ATRXP46100 AC007038.2-201ENST00000608095 740 ntBASIC2.57□□□□□ -2
ATRXP46100 AC068880.5-201ENST00000624331 290 ntBASIC2.57□□□□□ -2
ATRXP46100 AC011460.1-201ENST00000636268 1834 ntBASIC2.57□□□□□ -2
ATRXP46100 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.57□□□□□ -2
ATRXP46100 AC002543.1-201ENST00000299783 1954 ntBASIC2.57□□□□□ -2
ATRXP46100 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
ATRXP46100 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.57□□□□□ -2
ATRXP46100 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.57□□□□□ -2
ATRXP46100 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ATRXP46100 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ATRXP46100 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC2.57□□□□□ -2
ATRXP46100 AL356292.1-201ENST00000283110 373 ntBASIC2.57□□□□□ -2
ATRXP46100 RNU4-1-201ENST00000363925 141 ntBASIC2.57□□□□□ -2
ATRXP46100 SNORD51-201ENST00000384320 80 ntBASIC2.57□□□□□ -2
ATRXP46100 RNU6-1068P-201ENST00000410958 103 ntBASIC2.57□□□□□ -2
ATRXP46100 AC069218.2-201ENST00000411665 344 ntBASIC2.57□□□□□ -2
ATRXP46100 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.57□□□□□ -2
ATRXP46100 AC073464.1-201ENST00000429823 534 ntBASIC2.57□□□□□ -2
ATRXP46100 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.57□□□□□ -2
ATRXP46100 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.57□□□□□ -2
ATRXP46100 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC2.57□□□□□ -2
ATRXP46100 AC093767.1-201ENST00000504523 156 ntBASIC2.57□□□□□ -2
ATRXP46100 AC006499.2-201ENST00000513470 337 ntBASIC2.57□□□□□ -2
ATRXP46100 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
ATRXP46100 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.57□□□□□ -2
ATRXP46100 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.57□□□□□ -2
ATRXP46100 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.57□□□□□ -2
ATRXP46100 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.57□□□□□ -2
ATRXP46100 AC233702.9-201ENST00000581528 203 ntBASIC2.57□□□□□ -2
ATRXP46100 AC006254.3-201ENST00000603353 884 ntBASIC2.57□□□□□ -2
ATRXP46100 AC080078.2-201ENST00000603766 501 ntBASIC2.57□□□□□ -2
ATRXP46100 AC011468.4-201ENST00000603942 409 ntBASIC2.57□□□□□ -2
ATRXP46100 AP000907.4-201ENST00000604143 237 ntBASIC2.57□□□□□ -2
ATRXP46100 AC010200.2-201ENST00000605098 235 ntBASIC2.57□□□□□ -2
ATRXP46100 AC109347.2-201ENST00000610220 349 ntBASIC2.57□□□□□ -2
ATRXP46100 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.56□□□□□ -2
ATRXP46100 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.56□□□□□ -2
ATRXP46100 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.56□□□□□ -2
ATRXP46100 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.56□□□□□ -2
ATRXP46100 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ATRXP46100 Y_RNA.36-201ENST00000362602 112 ntBASIC2.56□□□□□ -2
ATRXP46100 RNU6-181P-201ENST00000363225 107 ntBASIC2.56□□□□□ -2
ATRXP46100 RNU6-343P-201ENST00000364709 104 ntBASIC2.56□□□□□ -2
ATRXP46100 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.56□□□□□ -2
ATRXP46100 RNU6-441P-201ENST00000384545 106 ntBASIC2.56□□□□□ -2
ATRXP46100 SNORA68.2-201ENST00000391263 128 ntBASIC2.56□□□□□ -2
ATRXP46100 DSTNP4-201ENST00000399472 474 ntBASIC2.56□□□□□ -2
ATRXP46100 DHFRP6-201ENST00000401776 268 ntBASIC2.56□□□□□ -2
ATRXP46100 HMGB1P17-201ENST00000403495 628 ntBASIC2.56□□□□□ -2
ATRXP46100 RPL30P3-201ENST00000424262 333 ntBASIC2.56□□□□□ -2
ATRXP46100 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.56□□□□□ -2
ATRXP46100 FCF1P1-201ENST00000432690 571 ntBASIC2.56□□□□□ -2
ATRXP46100 BNIP3P2-201ENST00000441221 577 ntBASIC2.56□□□□□ -2
ATRXP46100 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.56□□□□□ -2
ATRXP46100 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.56□□□□□ -2
ATRXP46100 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.56□□□□□ -2
ATRXP46100 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
ATRXP46100 AC105252.1-201ENST00000503089 286 ntBASIC2.56□□□□□ -2
ATRXP46100 RNU6-507P-201ENST00000516045 100 ntBASIC2.56□□□□□ -2
ATRXP46100 RNU6-445P-201ENST00000516949 107 ntBASIC2.56□□□□□ -2
ATRXP46100 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.56□□□□□ -2
ATRXP46100 OR5AL2P-201ENST00000532185 920 ntBASIC2.56□□□□□ -2
ATRXP46100 AC125611.2-201ENST00000551907 647 ntBASIC2.56□□□□□ -2
ATRXP46100 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.56□□□□□ -2
ATRXP46100 AC141257.3-201ENST00000572906 215 ntBASIC2.56□□□□□ -2
ATRXP46100 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.56□□□□□ -2
ATRXP46100 AC055876.5-201ENST00000605667 259 ntBASIC2.56□□□□□ -2
ATRXP46100 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
ATRXP46100 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
ATRXP46100 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
ATRXP46100 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC2.56□□□□□ -2
ATRXP46100 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC2.56□□□□□ -2
ATRXP46100 CBX3P1-201ENST00000325243 554 ntBASIC2.56□□□□□ -2
ATRXP46100 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.56□□□□□ -2
ATRXP46100 Y_RNA.205-201ENST00000364128 113 ntBASIC2.56□□□□□ -2
ATRXP46100 Y_RNA.419-201ENST00000384041 102 ntBASIC2.56□□□□□ -2
ATRXP46100 CALM2P3-201ENST00000400429 449 ntBASIC2.56□□□□□ -2
ATRXP46100 HSPD1P16-201ENST00000402302 394 ntBASIC2.56□□□□□ -2
ATRXP46100 RPS3AP9-201ENST00000417027 792 ntBASIC2.56□□□□□ -2
ATRXP46100 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.56□□□□□ -2
ATRXP46100 BEND7P1-201ENST00000422058 457 ntBASIC2.56□□□□□ -2
ATRXP46100 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.56□□□□□ -2
ATRXP46100 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.56□□□□□ -2
ATRXP46100 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.56□□□□□ -2
ATRXP46100 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.56□□□□□ -2
ATRXP46100 AC005297.2-201ENST00000450430 606 ntBASIC2.56□□□□□ -2
ATRXP46100 AL354710.1-201ENST00000453641 246 ntBASIC2.56□□□□□ -2
ATRXP46100 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.56□□□□□ -2
ATRXP46100 AC105914.1-201ENST00000511798 226 ntBASIC2.56□□□□□ -2
ATRXP46100 RNU6-430P-201ENST00000517078 107 ntBASIC2.56□□□□□ -2
ATRXP46100 AC018630.1-201ENST00000541376 925 ntBASIC2.56□□□□□ -2
ATRXP46100 AC123904.3-201ENST00000547218 814 ntBASIC2.56□□□□□ -2
ATRXP46100 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.56□□□□□ -2
ATRXP46100 AL359212.1-201ENST00000556608 614 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms