Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RNU4-22P-201ENST00000411058 166 ntBASIC2.21□□□□□ -2.06
TNFSF9P41273 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.21□□□□□ -2.06
TNFSF9P41273 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.21□□□□□ -2.06
TNFSF9P41273 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.21□□□□□ -2.06
TNFSF9P41273 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.21□□□□□ -2.06
TNFSF9P41273 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.21□□□□□ -2.06
TNFSF9P41273 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.21□□□□□ -2.06
TNFSF9P41273 AC068587.2-201ENST00000478386 781 ntBASIC2.21□□□□□ -2.06
TNFSF9P41273 RPS15AP36-201ENST00000492022 382 ntBASIC2.21□□□□□ -2.06
TNFSF9P41273 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.21□□□□□ -2.06
TNFSF9P41273 AC024589.1-201ENST00000512207 263 ntBASIC2.21□□□□□ -2.06
TNFSF9P41273 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.21□□□□□ -2.06
TNFSF9P41273 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.21□□□□□ -2.06
TNFSF9P41273 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.21□□□□□ -2.06
TNFSF9P41273 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.21□□□□□ -2.06
TNFSF9P41273 NRBF2P1-201ENST00000587407 859 ntBASIC2.21□□□□□ -2.06
TNFSF9P41273 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.21□□□□□ -2.06
TNFSF9P41273 AL391834.2-201ENST00000609982 546 ntBASIC2.21□□□□□ -2.06
TNFSF9P41273 AL121895.2-201ENST00000619558 447 ntBASIC2.21□□□□□ -2.06
TNFSF9P41273 YWHAEP7-203ENST00000622054 312 ntBASIC2.21□□□□□ -2.06
TNFSF9P41273 LINC02211-204ENST00000642024 1070 ntBASIC2.21□□□□□ -2.06
TNFSF9P41273 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TNFSF9P41273 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
TNFSF9P41273 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
TNFSF9P41273 PABPC1P9-201ENST00000426076 1612 ntBASIC2.2□□□□□ -2.06
TNFSF9P41273 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TNFSF9P41273 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TNFSF9P41273 ZNF29P-201ENST00000225587 168 ntBASIC2.2□□□□□ -2.06
TNFSF9P41273 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TNFSF9P41273 RNA5SP160-201ENST00000364866 120 ntBASIC2.2□□□□□ -2.06
TNFSF9P41273 MIR620-201ENST00000385232 95 ntBASIC2.2□□□□□ -2.06
TNFSF9P41273 MTND1P21-201ENST00000412991 285 ntBASIC2.2□□□□□ -2.06
TNFSF9P41273 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.2□□□□□ -2.06
TNFSF9P41273 USP9YP13-201ENST00000417797 480 ntBASIC2.2□□□□□ -2.06
TNFSF9P41273 HMGB1P49-201ENST00000418882 569 ntBASIC2.2□□□□□ -2.06
TNFSF9P41273 AL953862.1-201ENST00000423016 168 ntBASIC2.2□□□□□ -2.06
TNFSF9P41273 MTCO3P30-201ENST00000426425 670 ntBASIC2.2□□□□□ -2.06
TNFSF9P41273 SUMO1P4-201ENST00000429430 302 ntBASIC2.2□□□□□ -2.06
TNFSF9P41273 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.2□□□□□ -2.06
TNFSF9P41273 RPL35AP22-201ENST00000436855 335 ntBASIC2.2□□□□□ -2.06
TNFSF9P41273 SNRPEP7-201ENST00000438350 220 ntBASIC2.2□□□□□ -2.06
TNFSF9P41273 MTCO1P53-201ENST00000441633 699 ntBASIC2.2□□□□□ -2.06
TNFSF9P41273 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.2□□□□□ -2.06
TNFSF9P41273 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.2□□□□□ -2.06
TNFSF9P41273 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.2□□□□□ -2.06
TNFSF9P41273 AC109486.1-201ENST00000486833 374 ntBASIC2.2□□□□□ -2.06
TNFSF9P41273 AL160314.1-201ENST00000490836 438 ntBASIC2.2□□□□□ -2.06
TNFSF9P41273 RPL38P4-201ENST00000502376 214 ntBASIC2.2□□□□□ -2.06
TNFSF9P41273 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.2□□□□□ -2.06
TNFSF9P41273 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.2□□□□□ -2.06
TNFSF9P41273 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.2□□□□□ -2.06
TNFSF9P41273 SNORA31.15-201ENST00000516771 132 ntBASIC2.2□□□□□ -2.06
TNFSF9P41273 RNA5SP290-201ENST00000517133 127 ntBASIC2.2□□□□□ -2.06
TNFSF9P41273 HSPE1P18-201ENST00000517602 280 ntBASIC2.2□□□□□ -2.06
TNFSF9P41273 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.2□□□□□ -2.06
TNFSF9P41273 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.2□□□□□ -2.06
TNFSF9P41273 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.2□□□□□ -2.06
TNFSF9P41273 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.2□□□□□ -2.06
TNFSF9P41273 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.2□□□□□ -2.06
TNFSF9P41273 AC006270.3-201ENST00000605967 1036 ntBASIC2.2□□□□□ -2.06
TNFSF9P41273 AC131235.4-201ENST00000609288 620 ntBASIC2.2□□□□□ -2.06
TNFSF9P41273 AL157392.4-201ENST00000609756 345 ntBASIC2.2□□□□□ -2.06
TNFSF9P41273 HMGB1P24-202ENST00000615653 685 ntBASIC2.2□□□□□ -2.06
TNFSF9P41273 AC004520.1-201ENST00000608362 1413 ntBASIC2.19□□□□□ -2.06
TNFSF9P41273 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TNFSF9P41273 RNU5E-10P-201ENST00000363506 118 ntBASIC2.19□□□□□ -2.06
TNFSF9P41273 RNU6-560P-201ENST00000364007 108 ntBASIC2.19□□□□□ -2.06
TNFSF9P41273 SNORD116.1-201ENST00000365628 92 ntBASIC2.19□□□□□ -2.06
TNFSF9P41273 RNU6-413P-201ENST00000384115 107 ntBASIC2.19□□□□□ -2.06
TNFSF9P41273 RNU6-750P-201ENST00000390946 107 ntBASIC2.19□□□□□ -2.06
TNFSF9P41273 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TNFSF9P41273 MED14P1-201ENST00000430517 648 ntBASIC2.19□□□□□ -2.06
TNFSF9P41273 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.19□□□□□ -2.06
TNFSF9P41273 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
TNFSF9P41273 RPL23AP7-203ENST00000449021 469 ntBASIC2.19□□□□□ -2.06
TNFSF9P41273 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.19□□□□□ -2.06
TNFSF9P41273 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.19□□□□□ -2.06
TNFSF9P41273 NDUFB4P2-201ENST00000509515 391 ntBASIC2.19□□□□□ -2.06
TNFSF9P41273 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.19□□□□□ -2.06
TNFSF9P41273 SCARNA11.3-201ENST00000517276 130 ntBASIC2.19□□□□□ -2.06
TNFSF9P41273 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.19□□□□□ -2.06
TNFSF9P41273 AC010376.1-201ENST00000522101 334 ntBASIC2.19□□□□□ -2.06
TNFSF9P41273 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.19□□□□□ -2.06
TNFSF9P41273 AC023813.2-201ENST00000564321 469 ntBASIC2.19□□□□□ -2.06
TNFSF9P41273 OR4K7P-201ENST00000580232 945 ntBASIC2.19□□□□□ -2.06
TNFSF9P41273 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.19□□□□□ -2.06
TNFSF9P41273 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.19□□□□□ -2.06
TNFSF9P41273 DUXAP3-201ENST00000603616 594 ntBASIC2.19□□□□□ -2.06
TNFSF9P41273 AC025811.1-201ENST00000604312 472 ntBASIC2.19□□□□□ -2.06
TNFSF9P41273 AC135507.1-201ENST00000607214 561 ntBASIC2.19□□□□□ -2.06
TNFSF9P41273 AC024933.1-201ENST00000608472 348 ntBASIC2.19□□□□□ -2.06
TNFSF9P41273 AC018645.2-201ENST00000609151 472 ntBASIC2.19□□□□□ -2.06
TNFSF9P41273 AC022306.3-201ENST00000619930 550 ntBASIC2.19□□□□□ -2.06
TNFSF9P41273 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.19□□□□□ -2.06
TNFSF9P41273 AC013437.2-201ENST00000639587 677 ntBASIC2.19□□□□□ -2.06
TNFSF9P41273 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.19□□□□□ -2.06
TNFSF9P41273 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TNFSF9P41273 MTND4P9-201ENST00000507819 1346 ntBASIC2.18□□□□□ -2.06
TNFSF9P41273 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.18□□□□□ -2.06
TNFSF9P41273 AC093536.2-201ENST00000565257 1406 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms