Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.89□□□□□ -1.79
COL15A1P39059 AC000111.3-201ENST00000433478 193 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 AC005094.1-201ENST00000440420 368 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.89□□□□□ -1.79
COL15A1P39059 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.89□□□□□ -1.79
COL15A1P39059 PRDX4P1-201ENST00000507189 574 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.89□□□□□ -1.79
COL15A1P39059 RN7SKP272-201ENST00000516988 232 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 RNU6-1073P-201ENST00000517182 106 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 MTND1P35-201ENST00000526739 508 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 AC123904.3-201ENST00000547218 814 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 AL359212.1-201ENST00000556608 614 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 AL022099.1-201ENST00000604551 712 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 AC104458.1-201ENST00000608243 463 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 TUG1_2.1-201ENST00000614234 87 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.89□□□□□ -1.79
COL15A1P39059 CR848007.1-201ENST00000442354 1699 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 AC004925.1-201ENST00000624256 2706 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
COL15A1P39059 AC138915.3-201ENST00000562908 1389 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
COL15A1P39059 RNU6-1322P-201ENST00000364309 107 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 RNU6-1283P-201ENST00000365314 105 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL15A1P39059 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL15A1P39059 RNU6-483P-201ENST00000384088 108 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 RNU6-39P-201ENST00000384344 107 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 MIR1-2-201ENST00000384961 85 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 RPS3AP24-201ENST00000407896 734 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.89□□□□□ -1.79
COL15A1P39059 AL353193.1-201ENST00000421444 268 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 NFU1P2-201ENST00000448700 469 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 AL162389.1-201ENST00000449233 177 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.89□□□□□ -1.79
COL15A1P39059 SNRPGP6-201ENST00000451124 220 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.89□□□□□ -1.79
COL15A1P39059 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.89□□□□□ -1.79
COL15A1P39059 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 FAM92A1P2-202ENST00000504766 877 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.89□□□□□ -1.79
COL15A1P39059 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.89□□□□□ -1.79
COL15A1P39059 RNU6-1281P-201ENST00000516223 105 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 HMGB1P41-201ENST00000520234 440 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 AP003072.2-201ENST00000527756 676 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.89□□□□□ -1.79
COL15A1P39059 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.89□□□□□ -1.79
COL15A1P39059 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.89□□□□□ -1.79
COL15A1P39059 AF038458.1-201ENST00000588406 262 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 AC025449.1-201ENST00000603896 529 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.89□□□□□ -1.79
COL15A1P39059 MIR1321-201ENST00000637766 79 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.89□□□□□ -1.79
COL15A1P39059 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.88□□□□□ -1.79
COL15A1P39059 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL15A1P39059 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL15A1P39059 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
COL15A1P39059 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.88□□□□□ -1.79
COL15A1P39059 HSPE1P11-201ENST00000339579 310 ntBASIC3.88□□□□□ -1.79
COL15A1P39059 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.88□□□□□ -1.79
COL15A1P39059 RNU1-39P-201ENST00000383897 165 ntBASIC3.88□□□□□ -1.79
COL15A1P39059 RNU6-641P-201ENST00000384006 107 ntBASIC3.88□□□□□ -1.79
COL15A1P39059 RNU6-629P-201ENST00000384061 103 ntBASIC3.88□□□□□ -1.79
COL15A1P39059 RNU6-882P-201ENST00000391025 103 ntBASIC3.88□□□□□ -1.79
COL15A1P39059 AL136372.1-201ENST00000403060 228 ntBASIC3.88□□□□□ -1.79
COL15A1P39059 RNU2-37P-201ENST00000410695 177 ntBASIC3.88□□□□□ -1.79
COL15A1P39059 MRPL50P2-201ENST00000416821 482 ntBASIC3.88□□□□□ -1.79
COL15A1P39059 AL139281.1-201ENST00000422120 335 ntBASIC3.88□□□□□ -1.79
COL15A1P39059 RPS20P5-201ENST00000434808 360 ntBASIC3.88□□□□□ -1.79
COL15A1P39059 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.88□□□□□ -1.79
COL15A1P39059 RPS4XP13-201ENST00000483219 789 ntBASIC3.88□□□□□ -1.79
COL15A1P39059 MLLT10P2-201ENST00000506434 249 ntBASIC3.88□□□□□ -1.79
COL15A1P39059 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.88□□□□□ -1.79
COL15A1P39059 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
COL15A1P39059 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.88□□□□□ -1.79
COL15A1P39059 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.88□□□□□ -1.79
COL15A1P39059 RN7SKP132-201ENST00000516001 208 ntBASIC3.88□□□□□ -1.79
COL15A1P39059 RNU6-390P-201ENST00000516259 103 ntBASIC3.88□□□□□ -1.79
COL15A1P39059 AC109635.4-202ENST00000531666 412 ntBASIC3.88□□□□□ -1.79
COL15A1P39059 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
COL15A1P39059 HMGB1P6-201ENST00000569046 646 ntBASIC3.88□□□□□ -1.79
COL15A1P39059 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.88□□□□□ -1.79
COL15A1P39059 MIR4319-201ENST00000577285 85 ntBASIC3.88□□□□□ -1.79
COL15A1P39059 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.88□□□□□ -1.79
COL15A1P39059 AC007621.1-201ENST00000604544 437 ntBASIC3.88□□□□□ -1.79
COL15A1P39059 AP001330.5-201ENST00000607176 411 ntBASIC3.88□□□□□ -1.79
COL15A1P39059 AC006023.2-201ENST00000609916 167 ntBASIC3.88□□□□□ -1.79
COL15A1P39059 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.88□□□□□ -1.79
COL15A1P39059 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
COL15A1P39059 EXOC5P1-201ENST00000510543 1969 ntBASIC3.87□□□□□ -1.79
COL15A1P39059 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
COL15A1P39059 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL15A1P39059 PWAR6-201ENST00000552334 4618 ntBASIC3.87□□□□□ -1.79
COL15A1P39059 GABPAP-201ENST00000419271 1356 ntBASIC3.87□□□□□ -1.79
COL15A1P39059 ZNF826P-207ENST00000622273 1910 ntBASIC3.87□□□□□ -1.79
COL15A1P39059 AP001350.1-201ENST00000601906 1524 ntBASIC3.87□□□□□ -1.79
COL15A1P39059 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
COL15A1P39059 AC062016.1-201ENST00000355719 319 ntBASIC3.87□□□□□ -1.79
COL15A1P39059 Y_RNA.295-201ENST00000364918 102 ntBASIC3.87□□□□□ -1.79
COL15A1P39059 Y_RNA.381-201ENST00000365666 102 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms