Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 HMGB3P15-201ENST00000507326 574 ntBASIC3.64□□□□□ -1.83
CIITAP33076 AP001804.3-201ENST00000525146 880 ntBASIC3.64□□□□□ -1.83
CIITAP33076 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.64□□□□□ -1.83
CIITAP33076 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.64□□□□□ -1.83
CIITAP33076 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.64□□□□□ -1.83
CIITAP33076 AC034105.3-201ENST00000565294 442 ntBASIC3.64□□□□□ -1.83
CIITAP33076 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.64□□□□□ -1.83
CIITAP33076 AC098848.2-201ENST00000588023 330 ntBASIC3.64□□□□□ -1.83
CIITAP33076 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.64□□□□□ -1.83
CIITAP33076 AL121992.2-201ENST00000606262 256 ntBASIC3.64□□□□□ -1.83
CIITAP33076 AC093838.1-201ENST00000613014 469 ntBASIC3.64□□□□□ -1.83
CIITAP33076 AC004696.1-201ENST00000614345 607 ntBASIC3.64□□□□□ -1.83
CIITAP33076 MIR4275-201ENST00000636486 87 ntBASIC3.64□□□□□ -1.83
CIITAP33076 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.64□□□□□ -1.83
CIITAP33076 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CIITAP33076 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CIITAP33076 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.63□□□□□ -1.83
CIITAP33076 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.63□□□□□ -1.83
CIITAP33076 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CIITAP33076 AL353746.1-201ENST00000566293 6881 ntBASIC3.63□□□□□ -1.83
CIITAP33076 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.63□□□□□ -1.83
CIITAP33076 RNU6-451P-201ENST00000362921 107 ntBASIC3.63□□□□□ -1.83
CIITAP33076 SNORA38.1-201ENST00000364172 131 ntBASIC3.63□□□□□ -1.83
CIITAP33076 RNY1P12-201ENST00000364251 105 ntBASIC3.63□□□□□ -1.83
CIITAP33076 Y_RNA.333-201ENST00000365274 102 ntBASIC3.63□□□□□ -1.83
CIITAP33076 RNU6-637P-201ENST00000384050 107 ntBASIC3.63□□□□□ -1.83
CIITAP33076 SNORA7.4-201ENST00000384249 137 ntBASIC3.63□□□□□ -1.83
CIITAP33076 MIR1290-201ENST00000408735 78 ntBASIC3.63□□□□□ -1.83
CIITAP33076 RNU2-43P-201ENST00000410306 190 ntBASIC3.63□□□□□ -1.83
CIITAP33076 RNU2-62P-201ENST00000410868 191 ntBASIC3.63□□□□□ -1.83
CIITAP33076 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.63□□□□□ -1.83
CIITAP33076 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.63□□□□□ -1.83
CIITAP33076 AL121601.2-201ENST00000438019 707 ntBASIC3.63□□□□□ -1.83
CIITAP33076 GAPDHP27-201ENST00000447427 1020 ntBASIC3.63□□□□□ -1.83
CIITAP33076 AC234775.1-201ENST00000454247 670 ntBASIC3.63□□□□□ -1.83
CIITAP33076 SNORD27.1-201ENST00000516319 72 ntBASIC3.63□□□□□ -1.83
CIITAP33076 SNORA40.12-201ENST00000516329 111 ntBASIC3.63□□□□□ -1.83
CIITAP33076 SNORA20.3-201ENST00000516880 132 ntBASIC3.63□□□□□ -1.83
CIITAP33076 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.63□□□□□ -1.83
CIITAP33076 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.63□□□□□ -1.83
CIITAP33076 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CIITAP33076 AP000889.1-201ENST00000530968 660 ntBASIC3.63□□□□□ -1.83
CIITAP33076 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.63□□□□□ -1.83
CIITAP33076 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.63□□□□□ -1.83
CIITAP33076 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.63□□□□□ -1.83
CIITAP33076 AL022099.1-201ENST00000604551 712 ntBASIC3.63□□□□□ -1.83
CIITAP33076 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.63□□□□□ -1.83
CIITAP33076 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.63□□□□□ -1.83
CIITAP33076 MIR8057-201ENST00000620957 69 ntBASIC3.63□□□□□ -1.83
CIITAP33076 FER-210ENST00000628534 558 ntTSL 5 BASIC3.63□□□□□ -1.83
CIITAP33076 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CIITAP33076 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CIITAP33076 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CIITAP33076 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CIITAP33076 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
CIITAP33076 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CIITAP33076 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CIITAP33076 MTCO1P9-201ENST00000505577 1534 ntBASIC3.62□□□□□ -1.83
CIITAP33076 RPL7P26-201ENST00000333817 754 ntBASIC3.62□□□□□ -1.83
CIITAP33076 RNU1-75P-201ENST00000347264 129 ntBASIC3.62□□□□□ -1.83
CIITAP33076 RNY3P3-201ENST00000363816 102 ntBASIC3.62□□□□□ -1.83
CIITAP33076 Y_RNA.367-201ENST00000365544 101 ntBASIC3.62□□□□□ -1.83
CIITAP33076 MIR558-201ENST00000384920 94 ntBASIC3.62□□□□□ -1.83
CIITAP33076 MT-TL1-201ENST00000386347 75 ntBASIC3.62□□□□□ -1.83
CIITAP33076 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CIITAP33076 AL591034.1-201ENST00000407447 340 ntBASIC3.62□□□□□ -1.83
CIITAP33076 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.62□□□□□ -1.83
CIITAP33076 RNU2-36P-201ENST00000410361 191 ntBASIC3.62□□□□□ -1.83
CIITAP33076 RNA5SP107-201ENST00000411358 122 ntBASIC3.62□□□□□ -1.83
CIITAP33076 SSXP9-201ENST00000417503 292 ntBASIC3.62□□□□□ -1.83
CIITAP33076 SDCBPP3-201ENST00000419629 891 ntBASIC3.62□□□□□ -1.83
CIITAP33076 AL139413.1-201ENST00000421309 217 ntBASIC3.62□□□□□ -1.83
CIITAP33076 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.62□□□□□ -1.83
CIITAP33076 RPS20P5-201ENST00000434808 360 ntBASIC3.62□□□□□ -1.83
CIITAP33076 SNRPEP4-201ENST00000435815 279 ntBASIC3.62□□□□□ -1.83
CIITAP33076 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.62□□□□□ -1.83
CIITAP33076 AC016691.1-201ENST00000441321 413 ntBASIC3.62□□□□□ -1.83
CIITAP33076 CACYBPP2-201ENST00000453625 678 ntBASIC3.62□□□□□ -1.83
CIITAP33076 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CIITAP33076 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.62□□□□□ -1.83
CIITAP33076 MTCYBP18-201ENST00000501056 747 ntBASIC3.62□□□□□ -1.83
CIITAP33076 SCARNA20.6-201ENST00000517251 106 ntBASIC3.62□□□□□ -1.83
CIITAP33076 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.62□□□□□ -1.83
CIITAP33076 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.62□□□□□ -1.83
CIITAP33076 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.62□□□□□ -1.83
CIITAP33076 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.62□□□□□ -1.83
CIITAP33076 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.62□□□□□ -1.83
CIITAP33076 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.62□□□□□ -1.83
CIITAP33076 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.62□□□□□ -1.83
CIITAP33076 HMGB1P6-201ENST00000569046 646 ntBASIC3.62□□□□□ -1.83
CIITAP33076 MIR3186-201ENST00000577404 85 ntBASIC3.62□□□□□ -1.83
CIITAP33076 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.62□□□□□ -1.83
CIITAP33076 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.62□□□□□ -1.83
CIITAP33076 AC012493.2-201ENST00000595083 291 ntBASIC3.62□□□□□ -1.83
CIITAP33076 AL162413.1-201ENST00000603198 110 ntBASIC3.62□□□□□ -1.83
CIITAP33076 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.62□□□□□ -1.83
CIITAP33076 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.62□□□□□ -1.83
CIITAP33076 AP002826.1-201ENST00000608835 315 ntBASIC3.62□□□□□ -1.83
CIITAP33076 AC099778.2-201ENST00000610904 211 ntBASIC3.62□□□□□ -1.83
CIITAP33076 RMST_3.1-201ENST00000611651 109 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms