Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.38□□□□□ -1.87
TM4SF1P30408 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TM4SF1P30408 AC108206.1-201ENST00000570186 4159 ntBASIC3.38□□□□□ -1.87
TM4SF1P30408 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TM4SF1P30408 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TM4SF1P30408 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TM4SF1P30408 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TM4SF1P30408 RNA5SP289-201ENST00000362332 137 ntBASIC3.37□□□□□ -1.87
TM4SF1P30408 U8.2-201ENST00000363156 134 ntBASIC3.37□□□□□ -1.87
TM4SF1P30408 RNU6-1035P-201ENST00000384477 107 ntBASIC3.37□□□□□ -1.87
TM4SF1P30408 AL354719.1-201ENST00000406535 843 ntBASIC3.37□□□□□ -1.87
TM4SF1P30408 RPS3AP3-201ENST00000411933 242 ntBASIC3.37□□□□□ -1.87
TM4SF1P30408 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TM4SF1P30408 Z98742.3-201ENST00000418637 326 ntBASIC3.37□□□□□ -1.87
TM4SF1P30408 BTF3L4P3-201ENST00000418879 476 ntBASIC3.37□□□□□ -1.87
TM4SF1P30408 ELOCP4-201ENST00000420090 333 ntBASIC3.37□□□□□ -1.87
TM4SF1P30408 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.37□□□□□ -1.87
TM4SF1P30408 AC003685.2-201ENST00000422795 395 ntBASIC3.37□□□□□ -1.87
TM4SF1P30408 AC012498.1-201ENST00000424037 437 ntBASIC3.37□□□□□ -1.87
TM4SF1P30408 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.37□□□□□ -1.87
TM4SF1P30408 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.37□□□□□ -1.87
TM4SF1P30408 ZNF863P-201ENST00000426746 417 ntBASIC3.37□□□□□ -1.87
TM4SF1P30408 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.37□□□□□ -1.87
TM4SF1P30408 KATNBL1P3-201ENST00000443475 909 ntBASIC3.37□□□□□ -1.87
TM4SF1P30408 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.37□□□□□ -1.87
TM4SF1P30408 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.37□□□□□ -1.87
TM4SF1P30408 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.37□□□□□ -1.87
TM4SF1P30408 RNA5SP282-201ENST00000516355 108 ntBASIC3.37□□□□□ -1.87
TM4SF1P30408 RNA5SP290-201ENST00000517133 127 ntBASIC3.37□□□□□ -1.87
TM4SF1P30408 AP000867.2-201ENST00000532468 320 ntBASIC3.37□□□□□ -1.87
TM4SF1P30408 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.37□□□□□ -1.87
TM4SF1P30408 NRBF2P1-201ENST00000587407 859 ntBASIC3.37□□□□□ -1.87
TM4SF1P30408 ZNF861P-201ENST00000588126 639 ntBASIC3.37□□□□□ -1.87
TM4SF1P30408 DUXAP4-201ENST00000603046 613 ntBASIC3.37□□□□□ -1.87
TM4SF1P30408 AP000860.1-201ENST00000605250 559 ntBASIC3.37□□□□□ -1.87
TM4SF1P30408 AC239868.4-201ENST00000608318 671 ntBASIC3.37□□□□□ -1.87
TM4SF1P30408 AC004696.1-201ENST00000614345 607 ntBASIC3.37□□□□□ -1.87
TM4SF1P30408 AC025034.2-201ENST00000623264 286 ntBASIC3.37□□□□□ -1.87
TM4SF1P30408 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
TM4SF1P30408 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
TM4SF1P30408 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TM4SF1P30408 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TM4SF1P30408 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.37□□□□□ -1.87
TM4SF1P30408 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.36□□□□□ -1.87
TM4SF1P30408 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.36□□□□□ -1.87
TM4SF1P30408 Z98941.1-201ENST00000407764 100 ntBASIC3.36□□□□□ -1.87
TM4SF1P30408 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.36□□□□□ -1.87
TM4SF1P30408 AC245054.2-201ENST00000415639 319 ntBASIC3.36□□□□□ -1.87
TM4SF1P30408 TOMM20P4-201ENST00000427861 435 ntBASIC3.36□□□□□ -1.87
TM4SF1P30408 FCF1P1-201ENST00000432690 571 ntBASIC3.36□□□□□ -1.87
TM4SF1P30408 MTND1P28-201ENST00000435623 950 ntBASIC3.36□□□□□ -1.87
TM4SF1P30408 MTND2P22-201ENST00000444325 1033 ntBASIC3.36□□□□□ -1.87
TM4SF1P30408 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.36□□□□□ -1.87
TM4SF1P30408 MTND1P3-201ENST00000484956 952 ntBASIC3.36□□□□□ -1.87
TM4SF1P30408 RPS29P21-201ENST00000496272 170 ntBASIC3.36□□□□□ -1.87
TM4SF1P30408 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.36□□□□□ -1.87
TM4SF1P30408 NDUFB4P2-201ENST00000509515 391 ntBASIC3.36□□□□□ -1.87
TM4SF1P30408 HMGN1P30-201ENST00000589286 268 ntBASIC3.36□□□□□ -1.87
TM4SF1P30408 AC110760.3-201ENST00000598794 467 ntBASIC3.36□□□□□ -1.87
TM4SF1P30408 AC010620.1-201ENST00000601088 1102 ntBASIC3.36□□□□□ -1.87
TM4SF1P30408 SEPT7P9-203ENST00000604116 343 ntBASIC3.36□□□□□ -1.87
TM4SF1P30408 HSPE1P7-201ENST00000604681 321 ntBASIC3.36□□□□□ -1.87
TM4SF1P30408 AL391813.2-201ENST00000609113 322 ntBASIC3.36□□□□□ -1.87
TM4SF1P30408 U7.8-201ENST00000619968 63 ntBASIC3.36□□□□□ -1.87
TM4SF1P30408 MTND1P37-201ENST00000636562 264 ntBASIC3.36□□□□□ -1.87
TM4SF1P30408 AC099654.13-201ENST00000639774 207 ntBASIC3.36□□□□□ -1.87
TM4SF1P30408 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TM4SF1P30408 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TM4SF1P30408 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.36□□□□□ -1.87
TM4SF1P30408 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TM4SF1P30408 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.35□□□□□ -1.87
TM4SF1P30408 AL137003.2-201ENST00000606924 2538 ntBASIC3.35□□□□□ -1.87
TM4SF1P30408 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.35□□□□□ -1.87
TM4SF1P30408 HSPE1P11-201ENST00000339579 310 ntBASIC3.35□□□□□ -1.87
TM4SF1P30408 RPL23AP32-201ENST00000395315 459 ntBASIC3.35□□□□□ -1.87
TM4SF1P30408 AL138878.1-201ENST00000405131 347 ntBASIC3.35□□□□□ -1.87
TM4SF1P30408 RN7SKP58-201ENST00000411010 305 ntBASIC3.35□□□□□ -1.87
TM4SF1P30408 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.35□□□□□ -1.87
TM4SF1P30408 AL589872.1-201ENST00000426602 288 ntBASIC3.35□□□□□ -1.87
TM4SF1P30408 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.35□□□□□ -1.87
TM4SF1P30408 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.35□□□□□ -1.87
TM4SF1P30408 ARF4P2-201ENST00000430209 526 ntBASIC3.35□□□□□ -1.87
TM4SF1P30408 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.35□□□□□ -1.87
TM4SF1P30408 ARPC3P1-201ENST00000437218 533 ntBASIC3.35□□□□□ -1.87
TM4SF1P30408 RPS29P6-201ENST00000438196 145 ntBASIC3.35□□□□□ -1.87
TM4SF1P30408 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.35□□□□□ -1.87
TM4SF1P30408 MTND6P13-201ENST00000443510 523 ntBASIC3.35□□□□□ -1.87
TM4SF1P30408 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.35□□□□□ -1.87
TM4SF1P30408 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.35□□□□□ -1.87
TM4SF1P30408 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.35□□□□□ -1.87
TM4SF1P30408 RNU6-956P-201ENST00000458868 103 ntBASIC3.35□□□□□ -1.87
TM4SF1P30408 RNU6-953P-201ENST00000459154 107 ntBASIC3.35□□□□□ -1.87
TM4SF1P30408 AC087588.1-201ENST00000462203 316 ntBASIC3.35□□□□□ -1.87
TM4SF1P30408 AC003982.1-202ENST00000469928 248 ntBASIC3.35□□□□□ -1.87
TM4SF1P30408 RNA5SP337-201ENST00000517007 109 ntBASIC3.35□□□□□ -1.87
TM4SF1P30408 AP003181.2-201ENST00000528941 181 ntBASIC3.35□□□□□ -1.87
TM4SF1P30408 RPS3AP4-201ENST00000555161 764 ntBASIC3.35□□□□□ -1.87
TM4SF1P30408 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.35□□□□□ -1.87
TM4SF1P30408 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.35□□□□□ -1.87
TM4SF1P30408 AC010733.2-201ENST00000589496 5702 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms