Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.3□□□□□ -1.72
CNGA1P29973 NACAP2-201ENST00000318548 624 ntBASIC4.3□□□□□ -1.72
CNGA1P29973 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CNGA1P29973 Y_RNA.111-201ENST00000363248 100 ntBASIC4.3□□□□□ -1.72
CNGA1P29973 RNA5SP50-201ENST00000363731 107 ntBASIC4.3□□□□□ -1.72
CNGA1P29973 RNU4-20P-201ENST00000365601 151 ntBASIC4.3□□□□□ -1.72
CNGA1P29973 RNU6-116P-201ENST00000384042 109 ntBASIC4.3□□□□□ -1.72
CNGA1P29973 MIR514A2-201ENST00000385131 88 ntBASIC4.3□□□□□ -1.72
CNGA1P29973 MIR514A3-201ENST00000385132 88 ntBASIC4.3□□□□□ -1.72
CNGA1P29973 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CNGA1P29973 SNORD37.1-201ENST00000390968 65 ntBASIC4.3□□□□□ -1.72
CNGA1P29973 AL606923.1-201ENST00000406616 190 ntBASIC4.3□□□□□ -1.72
CNGA1P29973 RHEBP3-201ENST00000411920 351 ntBASIC4.3□□□□□ -1.72
CNGA1P29973 AL139413.1-201ENST00000421309 217 ntBASIC4.3□□□□□ -1.72
CNGA1P29973 AL592045.1-201ENST00000429867 352 ntBASIC4.3□□□□□ -1.72
CNGA1P29973 AC011742.1-201ENST00000431448 434 ntBASIC4.3□□□□□ -1.72
CNGA1P29973 AL591704.1-201ENST00000432574 275 ntBASIC4.3□□□□□ -1.72
CNGA1P29973 KCTD9P3-201ENST00000434597 1169 ntBASIC4.3□□□□□ -1.72
CNGA1P29973 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.3□□□□□ -1.72
CNGA1P29973 SNORA59A-201ENST00000459326 152 ntBASIC4.3□□□□□ -1.72
CNGA1P29973 RPL32P34-201ENST00000486380 400 ntBASIC4.3□□□□□ -1.72
CNGA1P29973 RNA5SP290-201ENST00000517133 127 ntBASIC4.3□□□□□ -1.72
CNGA1P29973 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.3□□□□□ -1.72
CNGA1P29973 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.3□□□□□ -1.72
CNGA1P29973 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.3□□□□□ -1.72
CNGA1P29973 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.3□□□□□ -1.72
CNGA1P29973 MTCO3P24-201ENST00000572729 782 ntBASIC4.3□□□□□ -1.72
CNGA1P29973 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.3□□□□□ -1.72
CNGA1P29973 AC010525.2-201ENST00000590920 195 ntBASIC4.3□□□□□ -1.72
CNGA1P29973 AC005000.2-201ENST00000605468 310 ntBASIC4.3□□□□□ -1.72
CNGA1P29973 AC009570.1-201ENST00000609599 745 ntBASIC4.3□□□□□ -1.72
CNGA1P29973 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.3□□□□□ -1.72
CNGA1P29973 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CNGA1P29973 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.3□□□□□ -1.72
CNGA1P29973 DUXAP9-208ENST00000622815 614 ntBASIC4.3□□□□□ -1.72
CNGA1P29973 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.3□□□□□ -1.72
CNGA1P29973 OR4G1P-203ENST00000641984 1631 ntBASIC4.3□□□□□ -1.72
CNGA1P29973 AL049641.1-201ENST00000441055 1948 ntBASIC4.3□□□□□ -1.72
CNGA1P29973 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CNGA1P29973 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CNGA1P29973 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CNGA1P29973 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CNGA1P29973 AF127577.6-201ENST00000623352 2191 ntBASIC4.29□□□□□ -1.72
CNGA1P29973 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.29□□□□□ -1.72
CNGA1P29973 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.29□□□□□ -1.72
CNGA1P29973 Y_RNA.88-201ENST00000363029 99 ntBASIC4.29□□□□□ -1.72
CNGA1P29973 Y_RNA.245-201ENST00000364493 95 ntBASIC4.29□□□□□ -1.72
CNGA1P29973 MIR325-201ENST00000385260 98 ntBASIC4.29□□□□□ -1.72
CNGA1P29973 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.29□□□□□ -1.72
CNGA1P29973 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CNGA1P29973 EEF1A1P40-201ENST00000412883 573 ntBASIC4.29□□□□□ -1.72
CNGA1P29973 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.29□□□□□ -1.72
CNGA1P29973 AC092047.1-201ENST00000424997 240 ntBASIC4.29□□□□□ -1.72
CNGA1P29973 AC092573.2-201ENST00000434546 243 ntBASIC4.29□□□□□ -1.72
CNGA1P29973 MTATP6P23-201ENST00000440153 476 ntBASIC4.29□□□□□ -1.72
CNGA1P29973 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.29□□□□□ -1.72
CNGA1P29973 RPL21P23-201ENST00000446654 460 ntBASIC4.29□□□□□ -1.72
CNGA1P29973 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.29□□□□□ -1.72
CNGA1P29973 AC012181.1-201ENST00000479895 423 ntBASIC4.29□□□□□ -1.72
CNGA1P29973 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.29□□□□□ -1.72
CNGA1P29973 SUMO2P6-201ENST00000505273 288 ntBASIC4.29□□□□□ -1.72
CNGA1P29973 MTCO3P9-201ENST00000506989 781 ntBASIC4.29□□□□□ -1.72
CNGA1P29973 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.29□□□□□ -1.72
CNGA1P29973 RNU6-1282P-201ENST00000516735 96 ntBASIC4.29□□□□□ -1.72
CNGA1P29973 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.29□□□□□ -1.72
CNGA1P29973 AL137161.1-201ENST00000532231 390 ntBASIC4.29□□□□□ -1.72
CNGA1P29973 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.29□□□□□ -1.72
CNGA1P29973 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
CNGA1P29973 AC128687.2-201ENST00000609657 566 ntBASIC4.29□□□□□ -1.72
CNGA1P29973 AL390240.1-201ENST00000612950 384 ntBASIC4.29□□□□□ -1.72
CNGA1P29973 Z99571.1-201ENST00000636677 394 ntBASIC4.29□□□□□ -1.72
CNGA1P29973 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CNGA1P29973 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CNGA1P29973 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.29□□□□□ -1.72
CNGA1P29973 HSPA8P4-201ENST00000511877 1920 ntBASIC4.29□□□□□ -1.72
CNGA1P29973 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.28□□□□□ -1.72
CNGA1P29973 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CNGA1P29973 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.28□□□□□ -1.72
CNGA1P29973 MTND4P14-201ENST00000435799 1354 ntBASIC4.28□□□□□ -1.72
CNGA1P29973 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNGA1P29973 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.28□□□□□ -1.72
CNGA1P29973 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CNGA1P29973 MIR490-201ENST00000384865 128 ntBASIC4.28□□□□□ -1.72
CNGA1P29973 Z98941.1-201ENST00000407764 100 ntBASIC4.28□□□□□ -1.72
CNGA1P29973 RNA5SP111-201ENST00000411386 101 ntBASIC4.28□□□□□ -1.72
CNGA1P29973 SRIP2-201ENST00000428470 166 ntBASIC4.28□□□□□ -1.72
CNGA1P29973 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.28□□□□□ -1.72
CNGA1P29973 RPL23AP69-201ENST00000431134 458 ntBASIC4.28□□□□□ -1.72
CNGA1P29973 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.28□□□□□ -1.72
CNGA1P29973 MTCO2P3-201ENST00000442543 421 ntBASIC4.28□□□□□ -1.72
CNGA1P29973 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.28□□□□□ -1.72
CNGA1P29973 MTND3P16-201ENST00000452205 344 ntBASIC4.28□□□□□ -1.72
CNGA1P29973 HMGN2P7-201ENST00000456186 273 ntBASIC4.28□□□□□ -1.72
CNGA1P29973 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.28□□□□□ -1.72
CNGA1P29973 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.28□□□□□ -1.72
CNGA1P29973 AC074344.1-201ENST00000512823 224 ntBASIC4.28□□□□□ -1.72
CNGA1P29973 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.28□□□□□ -1.72
CNGA1P29973 AF235103.2-201ENST00000525753 346 ntBASIC4.28□□□□□ -1.72
CNGA1P29973 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.28□□□□□ -1.72
CNGA1P29973 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms