Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 ISCA1P3-201ENST00000577104 373 ntBASIC2.05□□□□□ -2.08
USF1P22415 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.05□□□□□ -2.08
USF1P22415 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.05□□□□□ -2.08
USF1P22415 MIR4658-201ENST00000584344 65 ntBASIC2.05□□□□□ -2.08
USF1P22415 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.05□□□□□ -2.08
USF1P22415 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.05□□□□□ -2.08
USF1P22415 AL449363.1-201ENST00000617815 186 ntBASIC2.05□□□□□ -2.08
USF1P22415 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.05□□□□□ -2.08
USF1P22415 U2.21-201ENST00000637295 81 ntBASIC2.05□□□□□ -2.08
USF1P22415 AC010889.1-201ENST00000566193 2666 ntBASIC2.05□□□□□ -2.08
USF1P22415 MTND5P33-201ENST00000571250 1450 ntBASIC2.05□□□□□ -2.08
USF1P22415 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
USF1P22415 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
USF1P22415 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.05□□□□□ -2.08
USF1P22415 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
USF1P22415 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
USF1P22415 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
USF1P22415 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
USF1P22415 RNU1-91P-201ENST00000364746 163 ntBASIC2.04□□□□□ -2.08
USF1P22415 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
USF1P22415 RNU6-1083P-201ENST00000384022 107 ntBASIC2.04□□□□□ -2.08
USF1P22415 RNU6-1328P-201ENST00000410938 106 ntBASIC2.04□□□□□ -2.08
USF1P22415 MTCO3P30-201ENST00000426425 670 ntBASIC2.04□□□□□ -2.08
USF1P22415 AC244035.1-201ENST00000430042 390 ntBASIC2.04□□□□□ -2.08
USF1P22415 FAM103A2P-201ENST00000444122 354 ntBASIC2.04□□□□□ -2.08
USF1P22415 ELOCP30-201ENST00000447108 299 ntBASIC2.04□□□□□ -2.08
USF1P22415 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
USF1P22415 MTND4P27-201ENST00000450813 1354 ntBASIC2.04□□□□□ -2.08
USF1P22415 MTATP6P14-201ENST00000455189 673 ntBASIC2.04□□□□□ -2.08
USF1P22415 RNU7-26P-201ENST00000458980 63 ntBASIC2.04□□□□□ -2.08
USF1P22415 AC080128.1-201ENST00000474389 1917 ntBASIC2.04□□□□□ -2.08
USF1P22415 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.04□□□□□ -2.08
USF1P22415 RNA5SP402-201ENST00000517148 110 ntBASIC2.04□□□□□ -2.08
USF1P22415 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.04□□□□□ -2.08
USF1P22415 IGKV3-31-201ENST00000523109 329 ntBASIC2.04□□□□□ -2.08
USF1P22415 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.04□□□□□ -2.08
USF1P22415 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
USF1P22415 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.04□□□□□ -2.08
USF1P22415 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.04□□□□□ -2.08
USF1P22415 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.04□□□□□ -2.08
USF1P22415 AC007151.1-201ENST00000572774 483 ntBASIC2.04□□□□□ -2.08
USF1P22415 AC022662.1-201ENST00000580252 331 ntBASIC2.04□□□□□ -2.08
USF1P22415 AL158827.2-201ENST00000602494 330 ntBASIC2.04□□□□□ -2.08
USF1P22415 AC112220.3-201ENST00000605502 502 ntBASIC2.04□□□□□ -2.08
USF1P22415 RNU6-88P-201ENST00000606801 100 ntBASIC2.04□□□□□ -2.08
USF1P22415 AC004520.1-201ENST00000608362 1413 ntBASIC2.04□□□□□ -2.08
USF1P22415 AL121652.1-201ENST00000608851 448 ntBASIC2.04□□□□□ -2.08
USF1P22415 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.04□□□□□ -2.08
USF1P22415 AL691447.3-201ENST00000635020 330 ntBASIC2.04□□□□□ -2.08
USF1P22415 AC097655.1-201ENST00000635075 318 ntBASIC2.04□□□□□ -2.08
USF1P22415 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
USF1P22415 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.03□□□□□ -2.08
USF1P22415 AP000776.1-201ENST00000530032 1663 ntBASIC2.03□□□□□ -2.08
USF1P22415 RNU6-1167P-201ENST00000363227 94 ntBASIC2.03□□□□□ -2.08
USF1P22415 RNU6-778P-201ENST00000363269 103 ntBASIC2.03□□□□□ -2.08
USF1P22415 RNU4-92P-201ENST00000363783 136 ntBASIC2.03□□□□□ -2.08
USF1P22415 RNA5SP456-201ENST00000364002 114 ntBASIC2.03□□□□□ -2.08
USF1P22415 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.03□□□□□ -2.08
USF1P22415 AL162578.1-201ENST00000406202 378 ntBASIC2.03□□□□□ -2.08
USF1P22415 RN7SKP223-201ENST00000410582 62 ntBASIC2.03□□□□□ -2.08
USF1P22415 AL359704.1-201ENST00000411586 781 ntBASIC2.03□□□□□ -2.08
USF1P22415 RPL26P27-201ENST00000414397 437 ntBASIC2.03□□□□□ -2.08
USF1P22415 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.03□□□□□ -2.08
USF1P22415 SKA2P1-201ENST00000425592 390 ntBASIC2.03□□□□□ -2.08
USF1P22415 TOMM20P4-201ENST00000427861 435 ntBASIC2.03□□□□□ -2.08
USF1P22415 TXNL1P1-201ENST00000429528 554 ntBASIC2.03□□□□□ -2.08
USF1P22415 AC010153.1-201ENST00000432862 727 ntBASIC2.03□□□□□ -2.08
USF1P22415 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.03□□□□□ -2.08
USF1P22415 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.03□□□□□ -2.08
USF1P22415 RSU1P2-202ENST00000437884 485 ntBASIC2.03□□□□□ -2.08
USF1P22415 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.03□□□□□ -2.08
USF1P22415 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.03□□□□□ -2.08
USF1P22415 EXOSC3P1-201ENST00000448649 500 ntBASIC2.03□□□□□ -2.08
USF1P22415 AC011753.1-201ENST00000451001 220 ntBASIC2.03□□□□□ -2.08
USF1P22415 CECR9-201ENST00000453421 199 ntBASIC2.03□□□□□ -2.08
USF1P22415 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.03□□□□□ -2.08
USF1P22415 RNU7-59P-201ENST00000459101 61 ntBASIC2.03□□□□□ -2.08
USF1P22415 RPL7P18-201ENST00000478965 734 ntBASIC2.03□□□□□ -2.08
USF1P22415 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.03□□□□□ -2.08
USF1P22415 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.03□□□□□ -2.08
USF1P22415 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.03□□□□□ -2.08
USF1P22415 AC093281.2-201ENST00000510153 597 ntBASIC2.03□□□□□ -2.08
USF1P22415 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.03□□□□□ -2.08
USF1P22415 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.03□□□□□ -2.08
USF1P22415 RNU6-237P-201ENST00000515985 71 ntBASIC2.03□□□□□ -2.08
USF1P22415 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.03□□□□□ -2.08
USF1P22415 CKS1BP7-201ENST00000522230 235 ntBASIC2.03□□□□□ -2.08
USF1P22415 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.03□□□□□ -2.08
USF1P22415 MIR4524B-201ENST00000581569 115 ntBASIC2.03□□□□□ -2.08
USF1P22415 AC021171.1-201ENST00000603137 706 ntBASIC2.03□□□□□ -2.08
USF1P22415 OR10AB1P-201ENST00000609613 938 ntBASIC2.03□□□□□ -2.08
USF1P22415 AL137847.3-201ENST00000611521 109 ntBASIC2.03□□□□□ -2.08
USF1P22415 AL589743.7-201ENST00000612637 233 ntBASIC2.03□□□□□ -2.08
USF1P22415 HMGB1P24-202ENST00000615653 685 ntBASIC2.03□□□□□ -2.08
USF1P22415 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.03□□□□□ -2.08
USF1P22415 AC112204.3-201ENST00000623822 332 ntBASIC2.03□□□□□ -2.08
USF1P22415 MIR3199-2-201ENST00000636243 86 ntBASIC2.03□□□□□ -2.08
USF1P22415 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
USF1P22415 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
USF1P22415 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.03□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms