Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 LLPHP1-201ENST00000603571 367 ntBASIC1.88□□□□□ -2.11
COL5A1P20908 AL358072.1-201ENST00000604156 575 ntBASIC1.88□□□□□ -2.11
COL5A1P20908 AC023158.2-201ENST00000614876 543 ntBASIC1.88□□□□□ -2.11
COL5A1P20908 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.88□□□□□ -2.11
COL5A1P20908 AC120349.2-201ENST00000625002 298 ntBASIC1.88□□□□□ -2.11
COL5A1P20908 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.88□□□□□ -2.11
COL5A1P20908 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC1.87□□□□□ -2.11
COL5A1P20908 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
COL5A1P20908 SNORD116-23-201ENST00000384645 92 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 RNU2-28P-201ENST00000410457 189 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 RPL19P1-201ENST00000411635 428 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 RPS15AP12-201ENST00000419498 388 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 AC244035.1-201ENST00000430042 390 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 AL117351.1-201ENST00000438864 766 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 RPL39P6-201ENST00000448289 150 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 AC023424.2-201ENST00000493479 777 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC1.87□□□□□ -2.11
COL5A1P20908 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.87□□□□□ -2.11
COL5A1P20908 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.87□□□□□ -2.11
COL5A1P20908 OR5BM1P-201ENST00000512021 366 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 AC006499.2-201ENST00000513470 337 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 MTCO2P32-201ENST00000514865 403 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.87□□□□□ -2.11
COL5A1P20908 RNY4P37-201ENST00000516225 96 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 ARL2BPP5-201ENST00000523141 481 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.87□□□□□ -2.11
COL5A1P20908 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.87□□□□□ -2.11
COL5A1P20908 AP001189.2-201ENST00000527320 189 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.87□□□□□ -2.11
COL5A1P20908 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.87□□□□□ -2.11
COL5A1P20908 AC024909.2-201ENST00000553035 286 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC1.87□□□□□ -2.11
COL5A1P20908 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.87□□□□□ -2.11
COL5A1P20908 AC002984.1-201ENST00000591692 448 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 AC119751.7-201ENST00000600494 245 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 AP000254.1-201ENST00000609934 520 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 RMST_2.1-201ENST00000617263 136 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 AC090617.7-201ENST00000623952 126 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.87□□□□□ -2.11
COL5A1P20908 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.87□□□□□ -2.11
COL5A1P20908 CDR1-202ENST00000625883 1485 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 AL390862.1-201ENST00000635467 1469 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 MIRLET7G-201ENST00000362280 84 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 RNA5SP138-201ENST00000365098 114 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.87□□□□□ -2.11
COL5A1P20908 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 RNU2-68P-201ENST00000410878 191 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.87□□□□□ -2.11
COL5A1P20908 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.87□□□□□ -2.11
COL5A1P20908 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.87□□□□□ -2.11
COL5A1P20908 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.87□□□□□ -2.11
COL5A1P20908 AC098592.1-201ENST00000419352 333 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.87□□□□□ -2.11
COL5A1P20908 MTCYBP39-201ENST00000437562 491 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC1.87□□□□□ -2.11
COL5A1P20908 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.87□□□□□ -2.11
COL5A1P20908 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.87□□□□□ -2.11
COL5A1P20908 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.87□□□□□ -2.11
COL5A1P20908 OR6C5P-201ENST00000452388 923 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 RPS27AP8-201ENST00000452665 445 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.87□□□□□ -2.11
COL5A1P20908 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.87□□□□□ -2.11
COL5A1P20908 Y_RNA.655-201ENST00000515919 96 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 RNU6-232P-201ENST00000517144 64 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 OR5AK1P-201ENST00000524837 922 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.87□□□□□ -2.11
COL5A1P20908 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.87□□□□□ -2.11
COL5A1P20908 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.87□□□□□ -2.11
COL5A1P20908 MIR4474-201ENST00000579189 78 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.87□□□□□ -2.11
COL5A1P20908 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
COL5A1P20908 AC106028.5-201ENST00000610332 395 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 MIR7844-201ENST00000616161 122 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.87□□□□□ -2.11
COL5A1P20908 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.87□□□□□ -2.11
COL5A1P20908 AC098679.5-201ENST00000624394 571 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 AC091965.5-201ENST00000624785 342 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 FO624990.1-201ENST00000636373 85 ntBASIC1.87□□□□□ -2.11
COL5A1P20908 MTCO1P23-201ENST00000415223 1526 ntBASIC1.86□□□□□ -2.11
COL5A1P20908 AL390237.1-201ENST00000404226 1415 ntBASIC1.86□□□□□ -2.11
COL5A1P20908 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.86□□□□□ -2.11
COL5A1P20908 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.86□□□□□ -2.11
COL5A1P20908 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.86□□□□□ -2.11
COL5A1P20908 DDX43P2-201ENST00000604753 1354 ntBASIC1.86□□□□□ -2.11
COL5A1P20908 Y_RNA.18-201ENST00000362461 102 ntBASIC1.86□□□□□ -2.11
COL5A1P20908 Y_RNA.112-201ENST00000363250 102 ntBASIC1.86□□□□□ -2.11
COL5A1P20908 RNA5SP325-201ENST00000363756 130 ntBASIC1.86□□□□□ -2.11
COL5A1P20908 RNU4-24P-201ENST00000364565 139 ntBASIC1.86□□□□□ -2.11
COL5A1P20908 PRRC2CP1-201ENST00000404428 159 ntBASIC1.86□□□□□ -2.11
COL5A1P20908 AP000275.1-201ENST00000411943 390 ntBASIC1.86□□□□□ -2.11
COL5A1P20908 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.86□□□□□ -2.11
COL5A1P20908 RPL31P2-201ENST00000413849 377 ntBASIC1.86□□□□□ -2.11
COL5A1P20908 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.86□□□□□ -2.11
COL5A1P20908 AC083875.1-201ENST00000419509 405 ntBASIC1.86□□□□□ -2.11
COL5A1P20908 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.86□□□□□ -2.11
COL5A1P20908 MTCO3P5-201ENST00000433620 714 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms