Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
VCANP13611 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC0.54□□□□□ -2.32
VCANP13611 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.54□□□□□ -2.32
VCANP13611 Y_RNA.413-201ENST00000384007 102 ntBASIC0.54□□□□□ -2.32
VCANP13611 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.54□□□□□ -2.32
VCANP13611 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.54□□□□□ -2.32
VCANP13611 AL121769.1-201ENST00000469473 401 ntBASIC0.54□□□□□ -2.32
VCANP13611 Y_RNA.754-201ENST00000476024 102 ntBASIC0.54□□□□□ -2.32
VCANP13611 AL138976.2-201ENST00000563989 694 ntBASIC0.54□□□□□ -2.32
VCANP13611 Y_RNA.790-201ENST00000614282 102 ntBASIC0.54□□□□□ -2.32
VCANP13611 Y_RNA.782-201ENST00000614695 102 ntBASIC0.54□□□□□ -2.32
VCANP13611 AC100821.1-201ENST00000523153 2479 ntBASIC0.54□□□□□ -2.32
VCANP13611 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
VCANP13611 AC007834.2-201ENST00000536310 343 ntBASIC0.54□□□□□ -2.32
VCANP13611 AC084033.1-201ENST00000550830 633 ntBASIC0.54□□□□□ -2.32
VCANP13611 AC073111.2-201ENST00000605657 1075 ntBASIC0.54□□□□□ -2.32
VCANP13611 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.54□□□□□ -2.32
VCANP13611 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
VCANP13611 Y_RNA.288-201ENST00000364854 92 ntBASIC0.53□□□□□ -2.32
VCANP13611 SNRPEP7-201ENST00000438350 220 ntBASIC0.53□□□□□ -2.32
VCANP13611 AC118469.1-201ENST00000442943 488 ntBASIC0.53□□□□□ -2.32
VCANP13611 RPS29P8-201ENST00000445109 171 ntBASIC0.53□□□□□ -2.32
VCANP13611 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.53□□□□□ -2.32
VCANP13611 AL355802.3-201ENST00000607571 545 ntBASIC0.53□□□□□ -2.32
VCANP13611 AC013470.4-201ENST00000619978 986 ntBASIC0.53□□□□□ -2.32
VCANP13611 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.53□□□□□ -2.32
VCANP13611 CBX3P1-201ENST00000325243 554 ntBASIC0.53□□□□□ -2.32
VCANP13611 RN7SKP142-201ENST00000411236 328 ntBASIC0.53□□□□□ -2.32
VCANP13611 AL035666.1-201ENST00000446195 348 ntBASIC0.53□□□□□ -2.32
VCANP13611 snoU109.1-201ENST00000459339 135 ntBASIC0.53□□□□□ -2.32
VCANP13611 RNA5SP57-201ENST00000459463 123 ntBASIC0.53□□□□□ -2.32
VCANP13611 RPS27AP18-201ENST00000515536 459 ntBASIC0.53□□□□□ -2.32
VCANP13611 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC0.53□□□□□ -2.32
VCANP13611 AP000776.1-201ENST00000530032 1663 ntBASIC0.53□□□□□ -2.33
VCANP13611 RNU6-1126P-201ENST00000384002 107 ntBASIC0.53□□□□□ -2.33
VCANP13611 MIR524-201ENST00000385242 87 ntBASIC0.53□□□□□ -2.33
VCANP13611 SFR1P1-201ENST00000403720 688 ntBASIC0.53□□□□□ -2.33
VCANP13611 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.52□□□□□ -2.33
VCANP13611 AC087359.1-201ENST00000508335 1740 ntBASIC0.52□□□□□ -2.33
VCANP13611 MTCO1P56-201ENST00000401674 224 ntBASIC0.52□□□□□ -2.33
VCANP13611 RNU2-22P-201ENST00000411266 212 ntBASIC0.52□□□□□ -2.33
VCANP13611 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.52□□□□□ -2.33
VCANP13611 AC103851.1-201ENST00000506833 274 ntBASIC0.52□□□□□ -2.33
VCANP13611 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.52□□□□□ -2.33
VCANP13611 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.52□□□□□ -2.33
VCANP13611 MIR198-201ENST00000637333 62 ntBASIC0.52□□□□□ -2.33
VCANP13611 CISD1P1-201ENST00000393907 327 ntBASIC0.52□□□□□ -2.33
VCANP13611 CCNB2P1-201ENST00000399411 1150 ntBASIC0.52□□□□□ -2.33
VCANP13611 AC244453.4-201ENST00000419150 388 ntBASIC0.52□□□□□ -2.33
VCANP13611 AC246680.2-201ENST00000422106 389 ntBASIC0.52□□□□□ -2.33
VCANP13611 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.52□□□□□ -2.33
VCANP13611 DUXAP4-201ENST00000603046 613 ntBASIC0.52□□□□□ -2.33
VCANP13611 RNU1-58P-201ENST00000362413 163 ntBASIC0.51□□□□□ -2.33
VCANP13611 AC096649.2-201ENST00000416186 393 ntBASIC0.51□□□□□ -2.33
VCANP13611 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC0.51□□□□□ -2.33
VCANP13611 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.51□□□□□ -2.33
VCANP13611 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
VCANP13611 AL356379.1-201ENST00000414105 126 ntBASIC0.51□□□□□ -2.33
VCANP13611 SNORA62.5-201ENST00000516634 120 ntBASIC0.51□□□□□ -2.33
VCANP13611 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.51□□□□□ -2.33
VCANP13611 RNU6-1181P-201ENST00000384191 106 ntBASIC0.51□□□□□ -2.33
VCANP13611 MIR17-201ENST00000385012 84 ntBASIC0.51□□□□□ -2.33
VCANP13611 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
VCANP13611 AL358794.1-201ENST00000445689 381 ntBASIC0.51□□□□□ -2.33
VCANP13611 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC0.51□□□□□ -2.33
VCANP13611 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC0.51□□□□□ -2.33
VCANP13611 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC0.51□□□□□ -2.33
VCANP13611 Y_RNA.100-201ENST00000363141 102 ntBASIC0.5□□□□□ -2.33
VCANP13611 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
VCANP13611 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
VCANP13611 MTND5P14-201ENST00000441481 1267 ntBASIC0.5□□□□□ -2.33
VCANP13611 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.5□□□□□ -2.33
VCANP13611 AC145207.9-201ENST00000623802 325 ntBASIC0.5□□□□□ -2.33
VCANP13611 AC009452.1-201ENST00000640823 606 ntBASIC0.5□□□□□ -2.33
VCANP13611 MRPL35P1-201ENST00000404272 572 ntBASIC0.5□□□□□ -2.33
VCANP13611 SNORD56-201ENST00000413522 71 ntBASIC0.5□□□□□ -2.33
VCANP13611 TRAPPC2P10-201ENST00000415662 323 ntBASIC0.5□□□□□ -2.33
VCANP13611 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.5□□□□□ -2.33
VCANP13611 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.5□□□□□ -2.33
VCANP13611 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.5□□□□□ -2.33
VCANP13611 U4.2-201ENST00000618561 85 ntBASIC0.5□□□□□ -2.33
VCANP13611 AL162373.1-201ENST00000620433 407 ntBASIC0.5□□□□□ -2.33
VCANP13611 SNORA51.10-201ENST00000384418 136 ntBASIC0.49□□□□□ -2.33
VCANP13611 HSPE1P26-201ENST00000405341 275 ntBASIC0.49□□□□□ -2.33
VCANP13611 OR9R1P-201ENST00000412200 877 ntBASIC0.49□□□□□ -2.33
VCANP13611 SNORD124-201ENST00000459577 104 ntBASIC0.49□□□□□ -2.33
VCANP13611 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.49□□□□□ -2.33
VCANP13611 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC0.49□□□□□ -2.33
VCANP13611 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC0.49□□□□□ -2.33
VCANP13611 AL356057.2-201ENST00000403318 432 ntBASIC0.49□□□□□ -2.33
VCANP13611 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.49□□□□□ -2.33
VCANP13611 CLIC4P1-201ENST00000453177 535 ntBASIC0.49□□□□□ -2.33
VCANP13611 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.49□□□□□ -2.33
VCANP13611 MIR5190-201ENST00000581537 80 ntBASIC0.49□□□□□ -2.33
VCANP13611 AC004943.3-201ENST00000624116 600 ntBASIC0.49□□□□□ -2.33
VCANP13611 RPL31P60-201ENST00000478450 367 ntBASIC0.49□□□□□ -2.33
VCANP13611 MRPS17P9-201ENST00000511924 393 ntBASIC0.49□□□□□ -2.33
VCANP13611 uc_338.9-201ENST00000617424 182 ntBASIC0.49□□□□□ -2.33
VCANP13611 AC022079.2-201ENST00000619739 566 ntBASIC0.49□□□□□ -2.33
VCANP13611 SNORA51.6-201ENST00000384151 125 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms