Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC009852.2-201ENST00000567898 485 ntBASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 MIR4444-1-201ENST00000581696 74 ntBASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 MIR4444-2-201ENST00000584390 74 ntBASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 BDH2P1-201ENST00000602288 736 ntBASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 AL356489.2-201ENST00000566968 3528 ntBASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 AC100778.3-201ENST00000580060 1750 ntBASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 ZNF72P-201ENST00000425869 1908 ntBASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 PRO1804-201ENST00000623780 2050 ntBASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 RNU1-14P-201ENST00000362759 152 ntBASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 Y_RNA.64-201ENST00000362845 102 ntBASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 RNU6-288P-201ENST00000363690 104 ntBASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 RNU6-393P-201ENST00000384475 107 ntBASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 RNU6-817P-201ENST00000391083 104 ntBASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 PTMAP2-201ENST00000397627 327 ntBASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 AL139039.1-201ENST00000401900 692 ntBASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 AC096664.2-201ENST00000411843 406 ntBASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 AC108032.1-201ENST00000416706 207 ntBASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 MTCO1P39-201ENST00000426148 480 ntBASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 AC099799.1-201ENST00000439809 192 ntBASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 SNORD108-201ENST00000459332 71 ntBASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 AC087884.1-201ENST00000469738 328 ntBASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 HMGB1P35-201ENST00000503360 598 ntBASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 MIR3910-1-201ENST00000580936 111 ntBASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 AL021997.2-201ENST00000615674 271 ntBASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.78□□□□□ -1.48
CSB-PGBD3P0DP91 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 SNORD62.1-201ENST00000362541 86 ntBASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 RNU6-715P-201ENST00000365204 103 ntBASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 RNU6-842P-201ENST00000384269 107 ntBASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 SNORA36C-201ENST00000384289 132 ntBASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 RNU6-1093P-201ENST00000391194 107 ntBASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 AC097374.1-203ENST00000400783 485 ntBASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 AL157831.1-201ENST00000426134 473 ntBASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 NOTCH2P1-201ENST00000443481 624 ntBASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 BTF3P6-201ENST00000448054 499 ntBASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 PRELID3BP1-201ENST00000457142 540 ntBASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 AC108860.1-201ENST00000484521 383 ntBASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 SNORA31.3-201ENST00000516029 96 ntBASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 RNU6-182P-201ENST00000516970 105 ntBASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 IGKV2D-23-201ENST00000518179 286 ntBASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 AC091516.1-201ENST00000549191 703 ntBASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 RN7SL703P-201ENST00000578485 302 ntBASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 AC091178.1-203ENST00000584586 279 ntBASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 AC024220.1-201ENST00000603675 484 ntBASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 AL161423.1-201ENST00000613700 262 ntBASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 AC092376.2-201ENST00000622621 4116 ntBASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CSB-PGBD3P0DP91 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 Y_RNA.150-201ENST00000363562 102 ntBASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 Y_RNA.180-201ENST00000363867 113 ntBASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 Y_RNA.399-201ENST00000383955 105 ntBASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 SNORA41-201ENST00000384675 132 ntBASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 MTCO3P19-201ENST00000415864 321 ntBASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 CYP4F29P-201ENST00000420685 446 ntBASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 RPL21P109-201ENST00000422213 475 ntBASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 RBMY1KP-201ENST00000423480 476 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms