Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AC106782.4-201ENST00000568264 210 ntBASIC4.1□□□□□ -1.75
HMGB1P09429 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
HMGB1P09429 MIR3616-201ENST00000584070 92 ntBASIC4.1□□□□□ -1.75
HMGB1P09429 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.1□□□□□ -1.75
HMGB1P09429 Z99497.2-201ENST00000603634 310 ntBASIC4.1□□□□□ -1.75
HMGB1P09429 AL157786.1-207ENST00000627771 695 ntBASIC4.1□□□□□ -1.75
HMGB1P09429 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.09□□□□□ -1.75
HMGB1P09429 AL513302.2-201ENST00000562313 1842 ntBASIC4.09□□□□□ -1.75
HMGB1P09429 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
HMGB1P09429 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
HMGB1P09429 RNU6-179P-201ENST00000363350 107 ntBASIC4.09□□□□□ -1.75
HMGB1P09429 U8.9-201ENST00000365667 134 ntBASIC4.09□□□□□ -1.75
HMGB1P09429 RNU6-166P-201ENST00000384371 107 ntBASIC4.09□□□□□ -1.75
HMGB1P09429 RNU6-297P-201ENST00000384636 107 ntBASIC4.09□□□□□ -1.75
HMGB1P09429 MIR554-201ENST00000384874 96 ntBASIC4.09□□□□□ -1.75
HMGB1P09429 AL160275.3-201ENST00000423876 471 ntBASIC4.09□□□□□ -1.75
HMGB1P09429 RPL31P35-201ENST00000431058 377 ntBASIC4.09□□□□□ -1.75
HMGB1P09429 ISCA1P2-201ENST00000438679 421 ntBASIC4.09□□□□□ -1.75
HMGB1P09429 AC125238.1-201ENST00000448842 249 ntBASIC4.09□□□□□ -1.75
HMGB1P09429 AC098826.2-201ENST00000452011 651 ntBASIC4.09□□□□□ -1.75
HMGB1P09429 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.09□□□□□ -1.75
HMGB1P09429 RPS4XP2-201ENST00000458402 793 ntBASIC4.09□□□□□ -1.75
HMGB1P09429 SNORD42A-201ENST00000459584 64 ntBASIC4.09□□□□□ -1.75
HMGB1P09429 AC004801.2-202ENST00000463559 283 ntBASIC4.09□□□□□ -1.75
HMGB1P09429 AC021205.2-201ENST00000480069 347 ntBASIC4.09□□□□□ -1.75
HMGB1P09429 AIG1P1-201ENST00000503376 148 ntBASIC4.09□□□□□ -1.75
HMGB1P09429 RBBP4P6-201ENST00000508098 202 ntBASIC4.09□□□□□ -1.75
HMGB1P09429 ACA59.2-201ENST00000517061 156 ntBASIC4.09□□□□□ -1.75
HMGB1P09429 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.09□□□□□ -1.75
HMGB1P09429 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.09□□□□□ -1.75
HMGB1P09429 NRBF2P1-201ENST00000587407 859 ntBASIC4.09□□□□□ -1.75
HMGB1P09429 AC012493.2-201ENST00000595083 291 ntBASIC4.09□□□□□ -1.75
HMGB1P09429 AL590229.1-201ENST00000603497 542 ntBASIC4.09□□□□□ -1.75
HMGB1P09429 AL392048.1-201ENST00000613946 534 ntBASIC4.09□□□□□ -1.75
HMGB1P09429 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.09□□□□□ -1.75
HMGB1P09429 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HMGB1P09429 AC103710.2-202ENST00000641454 2853 ntBASIC4.09□□□□□ -1.75
HMGB1P09429 MTND5P30-201ENST00000452896 1731 ntBASIC4.09□□□□□ -1.76
HMGB1P09429 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.09□□□□□ -1.76
HMGB1P09429 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
HMGB1P09429 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
HMGB1P09429 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HMGB1P09429 AL356967.1-201ENST00000406305 431 ntBASIC4.08□□□□□ -1.76
HMGB1P09429 RNU6-55P-201ENST00000411092 107 ntBASIC4.08□□□□□ -1.76
HMGB1P09429 RNU6-954P-201ENST00000411355 107 ntBASIC4.08□□□□□ -1.76
HMGB1P09429 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HMGB1P09429 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGB1P09429 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.08□□□□□ -1.76
HMGB1P09429 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.08□□□□□ -1.76
HMGB1P09429 AC009961.2-201ENST00000435771 251 ntBASIC4.08□□□□□ -1.76
HMGB1P09429 AC003071.1-201ENST00000451219 789 ntBASIC4.08□□□□□ -1.76
HMGB1P09429 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGB1P09429 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGB1P09429 AC002456.2-201ENST00000509356 380 ntBASIC4.08□□□□□ -1.76
HMGB1P09429 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGB1P09429 AC107934.2-201ENST00000518653 310 ntBASIC4.08□□□□□ -1.76
HMGB1P09429 TRMT10BP1-201ENST00000519377 943 ntBASIC4.08□□□□□ -1.76
HMGB1P09429 AC017071.1-201ENST00000564407 2204 ntBASIC4.08□□□□□ -1.76
HMGB1P09429 AC093536.2-201ENST00000565257 1406 ntBASIC4.08□□□□□ -1.76
HMGB1P09429 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGB1P09429 ATP1B3P1-201ENST00000605365 821 ntBASIC4.08□□□□□ -1.76
HMGB1P09429 AL021997.1-201ENST00000605757 193 ntBASIC4.08□□□□□ -1.76
HMGB1P09429 OR2AS2P-201ENST00000606902 342 ntBASIC4.08□□□□□ -1.76
HMGB1P09429 AL357559.1-201ENST00000622228 274 ntBASIC4.08□□□□□ -1.76
HMGB1P09429 AC025034.2-201ENST00000623264 286 ntBASIC4.08□□□□□ -1.76
HMGB1P09429 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
HMGB1P09429 CDC27P3-201ENST00000635418 1910 ntBASIC4.07□□□□□ -1.76
HMGB1P09429 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HMGB1P09429 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.07□□□□□ -1.76
HMGB1P09429 RNU4-91P-201ENST00000364778 135 ntBASIC4.07□□□□□ -1.76
HMGB1P09429 RN7SKP285-201ENST00000410137 318 ntBASIC4.07□□□□□ -1.76
HMGB1P09429 RN7SKP142-201ENST00000411236 328 ntBASIC4.07□□□□□ -1.76
HMGB1P09429 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.07□□□□□ -1.76
HMGB1P09429 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.07□□□□□ -1.76
HMGB1P09429 BX295541.1-201ENST00000417774 250 ntBASIC4.07□□□□□ -1.76
HMGB1P09429 RPL31P12-201ENST00000422587 358 ntBASIC4.07□□□□□ -1.76
HMGB1P09429 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.07□□□□□ -1.76
HMGB1P09429 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.07□□□□□ -1.76
HMGB1P09429 RNU7-26P-201ENST00000458980 63 ntBASIC4.07□□□□□ -1.76
HMGB1P09429 AC116562.3-201ENST00000506136 177 ntBASIC4.07□□□□□ -1.76
HMGB1P09429 AC091826.1-201ENST00000514065 313 ntBASIC4.07□□□□□ -1.76
HMGB1P09429 SNORA25.11-201ENST00000515935 105 ntBASIC4.07□□□□□ -1.76
HMGB1P09429 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.07□□□□□ -1.76
HMGB1P09429 MTCYBP20-201ENST00000524239 1129 ntBASIC4.07□□□□□ -1.76
HMGB1P09429 AC068587.5-201ENST00000528506 175 ntBASIC4.07□□□□□ -1.76
HMGB1P09429 AC098848.2-201ENST00000588023 330 ntBASIC4.07□□□□□ -1.76
HMGB1P09429 AC008121.1-201ENST00000603244 268 ntBASIC4.07□□□□□ -1.76
HMGB1P09429 RMST_8.1-201ENST00000610287 165 ntBASIC4.07□□□□□ -1.76
HMGB1P09429 uc_338.14-201ENST00000613162 166 ntBASIC4.07□□□□□ -1.76
HMGB1P09429 AC011890.2-201ENST00000613393 294 ntBASIC4.07□□□□□ -1.76
HMGB1P09429 AC039056.2-201ENST00000622261 511 ntBASIC4.07□□□□□ -1.76
HMGB1P09429 AL034408.1-202ENST00000636088 415 ntBASIC4.07□□□□□ -1.76
HMGB1P09429 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HMGB1P09429 AC135776.4-201ENST00000624300 1904 ntBASIC4.07□□□□□ -1.76
HMGB1P09429 AL356274.2-201ENST00000624379 3752 ntBASIC4.07□□□□□ -1.76
HMGB1P09429 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGB1P09429 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.07□□□□□ -1.76
HMGB1P09429 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.06□□□□□ -1.76
HMGB1P09429 SNORD116-8-201ENST00000384365 95 ntBASIC4.06□□□□□ -1.76
HMGB1P09429 MIR184-201ENST00000384962 84 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms