Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.99□□□□□ -1.93
CLPTM1O96005 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLPTM1O96005 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CLPTM1O96005 SNORD17-201ENST00000390930 237 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 AL136372.1-201ENST00000403060 228 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 BTF3P7-201ENST00000407097 488 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 SNORD88.1-201ENST00000408684 91 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 RNU2-9P-201ENST00000410194 145 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 MTND1P23-201ENST00000416931 372 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 USP9YP18-201ENST00000425912 695 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 MTCO1P39-201ENST00000426148 480 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 ELOCP14-201ENST00000428070 331 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 AC093106.2-201ENST00000428212 385 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.99□□□□□ -1.93
CLPTM1O96005 MRPS10P2-201ENST00000431226 381 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.99□□□□□ -1.93
CLPTM1O96005 ELOCP7-201ENST00000439968 331 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 RPL26P6-201ENST00000440913 438 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 MTCO3P45-201ENST00000443036 613 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 AL121871.1-201ENST00000443413 436 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 RPL39P40-201ENST00000445481 146 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 AC016696.1-201ENST00000446949 318 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 AC003071.1-201ENST00000451219 789 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 CYCSP35-201ENST00000451978 304 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 GSTA11P-201ENST00000452866 669 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.99□□□□□ -1.93
CLPTM1O96005 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CLPTM1O96005 AC079382.1-201ENST00000493346 557 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.99□□□□□ -1.93
CLPTM1O96005 SNORA31.22-201ENST00000517204 135 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.99□□□□□ -1.93
CLPTM1O96005 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.99□□□□□ -1.93
CLPTM1O96005 HMGB1P41-201ENST00000520234 440 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CLPTM1O96005 AC011979.2-201ENST00000527568 352 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CLPTM1O96005 AC005951.2-201ENST00000576282 495 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 MTCO3P13-201ENST00000577757 781 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 AC098848.2-201ENST00000588023 330 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 AF038458.1-201ENST00000588406 262 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 AC024220.1-201ENST00000603675 484 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 AL121992.2-201ENST00000606262 256 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.99□□□□□ -1.93
CLPTM1O96005 AC012314.7-201ENST00000619693 93 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.99□□□□□ -1.93
CLPTM1O96005 TAB3P1-202ENST00000452645 1634 ntBASIC2.99□□□□□ -1.93
CLPTM1O96005 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.98□□□□□ -1.93
CLPTM1O96005 AC009812.4-201ENST00000569134 1805 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 AP003122.5-201ENST00000527668 3766 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CLPTM1O96005 Y_RNA.22-201ENST00000362492 102 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 RNU1-70P-201ENST00000362618 164 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 RNU6-799P-201ENST00000363567 107 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 RNA5SP50-201ENST00000363731 107 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 Y_RNA.248-201ENST00000364501 109 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 Y_RNA.256-201ENST00000364594 104 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 RNU6-108P-201ENST00000365558 107 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 MIR7-3-201ENST00000384898 110 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 MIR181B1-201ENST00000385240 110 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CLPTM1O96005 MIR1289-1-201ENST00000408836 144 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 MTATP6P18-201ENST00000417994 673 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 AL596276.1-201ENST00000434465 418 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.98□□□□□ -1.93
CLPTM1O96005 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.98□□□□□ -1.93
CLPTM1O96005 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.98□□□□□ -1.93
CLPTM1O96005 RBMY2UP-201ENST00000453474 324 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.98□□□□□ -1.93
CLPTM1O96005 AC034236.1-201ENST00000469891 373 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 AC010631.1-201ENST00000474150 156 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 AC092989.1-201ENST00000481235 277 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.98□□□□□ -1.93
CLPTM1O96005 RNU6-410P-201ENST00000517006 107 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.98□□□□□ -1.93
CLPTM1O96005 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.98□□□□□ -1.93
CLPTM1O96005 SNRPGP16-201ENST00000533275 226 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.98□□□□□ -1.93
CLPTM1O96005 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.98□□□□□ -1.93
CLPTM1O96005 AC128657.1-201ENST00000549459 145 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.98□□□□□ -1.93
CLPTM1O96005 AC092325.1-201ENST00000566449 554 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.98□□□□□ -1.93
CLPTM1O96005 AC105224.1-201ENST00000587055 421 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.98□□□□□ -1.93
CLPTM1O96005 AC012507.3-201ENST00000603556 477 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 AC025449.1-201ENST00000603896 529 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 AP001330.4-201ENST00000604350 154 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 AC012443.1-201ENST00000605605 231 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 AP001596.2-201ENST00000608410 312 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.98□□□□□ -1.93
CLPTM1O96005 AL356321.1-201ENST00000621360 228 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 AL360181.4-201ENST00000621752 134 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CLPTM1O96005 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.98□□□□□ -1.93
CLPTM1O96005 AC091564.4-201ENST00000533934 2194 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 Z83843.1-201ENST00000604070 3685 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 AC233263.6-201ENST00000631132 1963 ntBASIC2.98□□□□□ -1.93
CLPTM1O96005 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLPTM1O96005 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms