Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RNA5SP31-201ENST00000411144 127 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.11□□□□□ -1.91
NKX2-2O95096 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NKX2-2O95096 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.11□□□□□ -1.91
NKX2-2O95096 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.11□□□□□ -1.91
NKX2-2O95096 OR2B8P-201ENST00000432841 938 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 RPL36AP53-201ENST00000432891 316 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 BX679664.1-201ENST00000434429 253 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 ATP5C1P1-201ENST00000441945 895 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 AC027673.1-201ENST00000456245 405 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 RPS29P15-201ENST00000458329 171 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 SRRM1P2-201ENST00000464531 1192 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.11□□□□□ -1.91
NKX2-2O95096 AC117522.3-201ENST00000507974 584 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 SNORD59.2-201ENST00000516873 68 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 RNA5SP165-201ENST00000517142 115 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 RNU6-1315P-201ENST00000517187 99 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 AP003033.1-201ENST00000527244 415 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 AC104383.1-201ENST00000530297 370 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.11□□□□□ -1.91
NKX2-2O95096 AC007458.1-201ENST00000542812 373 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 AC004492.1-201ENST00000607036 742 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 AF250324.2-201ENST00000608299 610 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 DUSP12P1-201ENST00000612874 516 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 AC006133.1-201ENST00000617106 264 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 U4.5-201ENST00000617137 123 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 SNORD39.4-201ENST00000620099 78 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 AC099506.2-201ENST00000623074 221 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 AL512643.1-201ENST00000635735 524 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 U2.21-201ENST00000637295 81 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.11□□□□□ -1.91
NKX2-2O95096 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.11□□□□□ -1.91
NKX2-2O95096 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
NKX2-2O95096 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
NKX2-2O95096 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.1□□□□□ -1.91
NKX2-2O95096 AC007496.3-201ENST00000624987 3443 ntBASIC3.1□□□□□ -1.91
NKX2-2O95096 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.1□□□□□ -1.91
NKX2-2O95096 AC004972.1-201ENST00000623934 2209 ntBASIC3.1□□□□□ -1.91
NKX2-2O95096 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
NKX2-2O95096 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NKX2-2O95096 OR4G2P-201ENST00000328113 903 ntBASIC3.1□□□□□ -1.91
NKX2-2O95096 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
NKX2-2O95096 RNU1-75P-201ENST00000347264 129 ntBASIC3.1□□□□□ -1.91
NKX2-2O95096 RNU6-1085P-201ENST00000363576 107 ntBASIC3.1□□□□□ -1.91
NKX2-2O95096 RNU6-1029P-201ENST00000384109 107 ntBASIC3.1□□□□□ -1.91
NKX2-2O95096 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
NKX2-2O95096 RNU6-1158P-201ENST00000391167 107 ntBASIC3.1□□□□□ -1.91
NKX2-2O95096 AC093578.1-201ENST00000415219 368 ntBASIC3.1□□□□□ -1.91
NKX2-2O95096 AL031779.1-201ENST00000415663 330 ntBASIC3.1□□□□□ -1.91
NKX2-2O95096 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.1□□□□□ -1.91
NKX2-2O95096 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NKX2-2O95096 AL160275.3-201ENST00000423876 471 ntBASIC3.1□□□□□ -1.91
NKX2-2O95096 AL596276.1-201ENST00000434465 418 ntBASIC3.1□□□□□ -1.91
NKX2-2O95096 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.1□□□□□ -1.91
NKX2-2O95096 AC006539.3-201ENST00000454258 129 ntBASIC3.1□□□□□ -1.91
NKX2-2O95096 AL162395.1-201ENST00000457882 422 ntBASIC3.1□□□□□ -1.91
NKX2-2O95096 RNU7-63P-201ENST00000459054 62 ntBASIC3.1□□□□□ -1.91
NKX2-2O95096 GMFBP1-201ENST00000467831 427 ntBASIC3.1□□□□□ -1.91
NKX2-2O95096 RPL21P13-201ENST00000488305 481 ntBASIC3.1□□□□□ -1.91
NKX2-2O95096 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.1□□□□□ -1.91
NKX2-2O95096 AC104806.1-201ENST00000508720 308 ntBASIC3.1□□□□□ -1.91
NKX2-2O95096 AC009646.1-201ENST00000510455 318 ntBASIC3.1□□□□□ -1.91
NKX2-2O95096 AC108043.1-201ENST00000512696 574 ntBASIC3.1□□□□□ -1.91
NKX2-2O95096 Y_RNA.693-201ENST00000516641 110 ntBASIC3.1□□□□□ -1.91
NKX2-2O95096 RNA5SP503-201ENST00000517047 117 ntBASIC3.1□□□□□ -1.91
NKX2-2O95096 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NKX2-2O95096 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.1□□□□□ -1.91
NKX2-2O95096 AL512310.1-201ENST00000548639 172 ntBASIC3.1□□□□□ -1.91
NKX2-2O95096 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.1□□□□□ -1.91
NKX2-2O95096 AC068135.2-201ENST00000569293 1028 ntBASIC3.1□□□□□ -1.91
NKX2-2O95096 MIR4703-201ENST00000577728 79 ntBASIC3.1□□□□□ -1.91
NKX2-2O95096 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NKX2-2O95096 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
NKX2-2O95096 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.1□□□□□ -1.91
NKX2-2O95096 AC008752.3-201ENST00000588113 712 ntBASIC3.1□□□□□ -1.91
NKX2-2O95096 AP001596.2-201ENST00000608410 312 ntBASIC3.1□□□□□ -1.91
NKX2-2O95096 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.1□□□□□ -1.91
NKX2-2O95096 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.09□□□□□ -1.91
NKX2-2O95096 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
NKX2-2O95096 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NKX2-2O95096 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NKX2-2O95096 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.09□□□□□ -1.91
NKX2-2O95096 RNA5SP50-201ENST00000363731 107 ntBASIC3.09□□□□□ -1.91
NKX2-2O95096 RNU6-1322P-201ENST00000364309 107 ntBASIC3.09□□□□□ -1.91
NKX2-2O95096 SNORA4.3-201ENST00000365564 137 ntBASIC3.09□□□□□ -1.91
NKX2-2O95096 Y_RNA.409-201ENST00000383990 98 ntBASIC3.09□□□□□ -1.91
NKX2-2O95096 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NKX2-2O95096 CISD1P1-201ENST00000393907 327 ntBASIC3.09□□□□□ -1.91
NKX2-2O95096 OR6C66P-201ENST00000414917 930 ntBASIC3.09□□□□□ -1.91
NKX2-2O95096 ZNF885P-201ENST00000420174 1098 ntBASIC3.09□□□□□ -1.91
NKX2-2O95096 AL714022.1-201ENST00000439897 151 ntBASIC3.09□□□□□ -1.91
NKX2-2O95096 MTND1P18-201ENST00000448191 573 ntBASIC3.09□□□□□ -1.91
NKX2-2O95096 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.09□□□□□ -1.91
NKX2-2O95096 FDX1P2-201ENST00000450769 375 ntBASIC3.09□□□□□ -1.91
NKX2-2O95096 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.09□□□□□ -1.91
NKX2-2O95096 SNORA84-201ENST00000459229 133 ntBASIC3.09□□□□□ -1.91
NKX2-2O95096 snoU13.28-201ENST00000459235 104 ntBASIC3.09□□□□□ -1.91
NKX2-2O95096 AC006512.1-201ENST00000468816 291 ntBASIC3.09□□□□□ -1.91
NKX2-2O95096 AC034236.1-201ENST00000469891 373 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 409.1 ms