Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.94□□□□□ -1.62
PRPF40AO75400 AC022493.1-201ENST00000492984 337 ntBASIC4.94□□□□□ -1.62
PRPF40AO75400 RN7SKP295-201ENST00000517264 153 ntBASIC4.94□□□□□ -1.62
PRPF40AO75400 AP003122.3-201ENST00000526316 255 ntBASIC4.94□□□□□ -1.62
PRPF40AO75400 AP000827.1-201ENST00000527814 258 ntBASIC4.94□□□□□ -1.62
PRPF40AO75400 AC084851.1-201ENST00000529105 249 ntBASIC4.94□□□□□ -1.62
PRPF40AO75400 AC004024.1-201ENST00000549244 247 ntBASIC4.94□□□□□ -1.62
PRPF40AO75400 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.94□□□□□ -1.62
PRPF40AO75400 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.94□□□□□ -1.62
PRPF40AO75400 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.94□□□□□ -1.62
PRPF40AO75400 MIR378J-201ENST00000611988 109 ntBASIC4.94□□□□□ -1.62
PRPF40AO75400 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PRPF40AO75400 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.94□□□□□ -1.62
PRPF40AO75400 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
PRPF40AO75400 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PRPF40AO75400 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
PRPF40AO75400 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
PRPF40AO75400 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PRPF40AO75400 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.93□□□□□ -1.62
PRPF40AO75400 AC117470.1-201ENST00000381974 330 ntBASIC4.93□□□□□ -1.62
PRPF40AO75400 RNU6-741P-201ENST00000383889 107 ntBASIC4.93□□□□□ -1.62
PRPF40AO75400 Y_RNA.459-201ENST00000384251 102 ntBASIC4.93□□□□□ -1.62
PRPF40AO75400 SNORA75.6-201ENST00000391318 127 ntBASIC4.93□□□□□ -1.62
PRPF40AO75400 CYCSP33-201ENST00000414485 327 ntBASIC4.93□□□□□ -1.62
PRPF40AO75400 RPL23AP1-201ENST00000428990 471 ntBASIC4.93□□□□□ -1.62
PRPF40AO75400 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.93□□□□□ -1.62
PRPF40AO75400 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.93□□□□□ -1.62
PRPF40AO75400 AL035666.1-201ENST00000446195 348 ntBASIC4.93□□□□□ -1.62
PRPF40AO75400 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.93□□□□□ -1.62
PRPF40AO75400 AC133473.1-201ENST00000455173 299 ntBASIC4.93□□□□□ -1.62
PRPF40AO75400 DHFRP3-201ENST00000455595 559 ntBASIC4.93□□□□□ -1.62
PRPF40AO75400 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.93□□□□□ -1.62
PRPF40AO75400 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.93□□□□□ -1.62
PRPF40AO75400 SNORA70.16-201ENST00000516390 95 ntBASIC4.93□□□□□ -1.62
PRPF40AO75400 MIR892C-201ENST00000516410 77 ntBASIC4.93□□□□□ -1.62
PRPF40AO75400 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.93□□□□□ -1.62
PRPF40AO75400 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.93□□□□□ -1.62
PRPF40AO75400 AP001781.1-201ENST00000530977 207 ntBASIC4.93□□□□□ -1.62
PRPF40AO75400 AC006064.5-201ENST00000541782 248 ntBASIC4.93□□□□□ -1.62
PRPF40AO75400 TRAV37-201ENST00000553906 342 ntBASIC4.93□□□□□ -1.62
PRPF40AO75400 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.93□□□□□ -1.62
PRPF40AO75400 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.93□□□□□ -1.62
PRPF40AO75400 MIR4715-201ENST00000584117 79 ntBASIC4.93□□□□□ -1.62
PRPF40AO75400 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.93□□□□□ -1.62
PRPF40AO75400 AC079587.1-201ENST00000603846 277 ntBASIC4.93□□□□□ -1.62
PRPF40AO75400 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.93□□□□□ -1.62
PRPF40AO75400 AL021997.2-201ENST00000615674 271 ntBASIC4.93□□□□□ -1.62
PRPF40AO75400 PLCE1P1-201ENST00000622094 305 ntBASIC4.93□□□□□ -1.62
PRPF40AO75400 OR56B2P-202ENST00000641377 2453 ntBASIC4.93□□□□□ -1.62
PRPF40AO75400 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PRPF40AO75400 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
PRPF40AO75400 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PRPF40AO75400 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PRPF40AO75400 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.93□□□□□ -1.62
PRPF40AO75400 NOL8P1-201ENST00000508336 3529 ntBASIC4.93□□□□□ -1.62
PRPF40AO75400 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
PRPF40AO75400 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.92□□□□□ -1.62
PRPF40AO75400 AL133243.3-201ENST00000617415 3004 ntBASIC4.92□□□□□ -1.62
PRPF40AO75400 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.92□□□□□ -1.62
PRPF40AO75400 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF40AO75400 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.92□□□□□ -1.62
PRPF40AO75400 Y_RNA.404-201ENST00000383978 102 ntBASIC4.92□□□□□ -1.62
PRPF40AO75400 SNORD73A-201ENST00000386062 65 ntBASIC4.92□□□□□ -1.62
PRPF40AO75400 AL445529.1-201ENST00000398713 389 ntBASIC4.92□□□□□ -1.62
PRPF40AO75400 SNORA3C-201ENST00000408792 125 ntBASIC4.92□□□□□ -1.62
PRPF40AO75400 RNU2-3P-201ENST00000410144 191 ntBASIC4.92□□□□□ -1.62
PRPF40AO75400 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.92□□□□□ -1.62
PRPF40AO75400 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.92□□□□□ -1.62
PRPF40AO75400 RNU7-187P-201ENST00000458985 68 ntBASIC4.92□□□□□ -1.62
PRPF40AO75400 RN7SL860P-201ENST00000473738 223 ntBASIC4.92□□□□□ -1.62
PRPF40AO75400 AC018437.1-201ENST00000492214 406 ntBASIC4.92□□□□□ -1.62
PRPF40AO75400 AC078817.1-201ENST00000492623 435 ntBASIC4.92□□□□□ -1.62
PRPF40AO75400 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.92□□□□□ -1.62
PRPF40AO75400 RN7SL812P-201ENST00000493791 279 ntBASIC4.92□□□□□ -1.62
PRPF40AO75400 AC083829.1-201ENST00000503756 657 ntBASIC4.92□□□□□ -1.62
PRPF40AO75400 RNU6-307P-201ENST00000516743 106 ntBASIC4.92□□□□□ -1.62
PRPF40AO75400 AC009902.1-201ENST00000519351 183 ntBASIC4.92□□□□□ -1.62
PRPF40AO75400 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.92□□□□□ -1.62
PRPF40AO75400 AC084783.1-201ENST00000565846 910 ntBASIC4.92□□□□□ -1.62
PRPF40AO75400 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.92□□□□□ -1.62
PRPF40AO75400 AC053481.4-201ENST00000583164 216 ntBASIC4.92□□□□□ -1.62
PRPF40AO75400 MIR5096-201ENST00000583713 70 ntBASIC4.92□□□□□ -1.62
PRPF40AO75400 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.92□□□□□ -1.62
PRPF40AO75400 AC083806.3-201ENST00000614016 455 ntBASIC4.92□□□□□ -1.62
PRPF40AO75400 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.92□□□□□ -1.62
PRPF40AO75400 RMST_4.1-201ENST00000616886 107 ntBASIC4.92□□□□□ -1.62
PRPF40AO75400 AP005019.3-201ENST00000620418 560 ntBASIC4.92□□□□□ -1.62
PRPF40AO75400 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.92□□□□□ -1.62
PRPF40AO75400 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF40AO75400 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.92□□□□□ -1.62
PRPF40AO75400 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF40AO75400 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF40AO75400 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PRPF40AO75400 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.91□□□□□ -1.62
PRPF40AO75400 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PRPF40AO75400 AC010300.1-201ENST00000600671 5134 ntBASIC4.91□□□□□ -1.62
PRPF40AO75400 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PRPF40AO75400 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PRPF40AO75400 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
PRPF40AO75400 Y_RNA.2-201ENST00000362330 96 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms