Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.64□□□□□ -1.99
SDC3O75056 SUMO2P6-201ENST00000505273 288 ntBASIC2.64□□□□□ -1.99
SDC3O75056 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.64□□□□□ -1.99
SDC3O75056 RNU6-927P-201ENST00000516199 100 ntBASIC2.64□□□□□ -1.99
SDC3O75056 RNU6-64P-201ENST00000517119 105 ntBASIC2.64□□□□□ -1.99
SDC3O75056 RNU6-232P-201ENST00000517144 64 ntBASIC2.64□□□□□ -1.99
SDC3O75056 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.64□□□□□ -1.99
SDC3O75056 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SDC3O75056 HSPE1P20-201ENST00000538133 289 ntBASIC2.64□□□□□ -1.99
SDC3O75056 AC007115.1-201ENST00000546853 234 ntBASIC2.64□□□□□ -1.99
SDC3O75056 AL391261.3-201ENST00000557194 520 ntBASIC2.64□□□□□ -1.99
SDC3O75056 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.64□□□□□ -1.99
SDC3O75056 MIR4293-201ENST00000584305 78 ntBASIC2.64□□□□□ -1.99
SDC3O75056 HMGN2P15-201ENST00000585707 270 ntBASIC2.64□□□□□ -1.99
SDC3O75056 MTND4LP5-201ENST00000605152 292 ntBASIC2.64□□□□□ -1.99
SDC3O75056 RPL23AP88-201ENST00000605759 454 ntBASIC2.64□□□□□ -1.99
SDC3O75056 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.64□□□□□ -1.99
SDC3O75056 AC009159.1-201ENST00000618386 642 ntBASIC2.64□□□□□ -1.99
SDC3O75056 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.64□□□□□ -1.99
SDC3O75056 MAPK10-266ENST00000641066 6555 ntBASIC2.64□□□□□ -1.99
SDC3O75056 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
SDC3O75056 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.63□□□□□ -1.99
SDC3O75056 RNU6-1284P-201ENST00000363701 100 ntBASIC2.63□□□□□ -1.99
SDC3O75056 RNU6-553P-201ENST00000364047 96 ntBASIC2.63□□□□□ -1.99
SDC3O75056 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
SDC3O75056 RNU6-278P-201ENST00000390945 109 ntBASIC2.63□□□□□ -1.99
SDC3O75056 BTF3L4P3-201ENST00000418879 476 ntBASIC2.63□□□□□ -1.99
SDC3O75056 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.63□□□□□ -1.99
SDC3O75056 AL358075.3-201ENST00000426289 226 ntBASIC2.63□□□□□ -1.99
SDC3O75056 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.63□□□□□ -1.99
SDC3O75056 TIMM9P1-201ENST00000436122 256 ntBASIC2.63□□□□□ -1.99
SDC3O75056 AC013267.1-201ENST00000458227 267 ntBASIC2.63□□□□□ -1.99
SDC3O75056 RNU7-125P-201ENST00000458760 62 ntBASIC2.63□□□□□ -1.99
SDC3O75056 AC008571.1-201ENST00000467232 300 ntBASIC2.63□□□□□ -1.99
SDC3O75056 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.63□□□□□ -1.99
SDC3O75056 BZW1P2-201ENST00000473537 826 ntBASIC2.63□□□□□ -1.99
SDC3O75056 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.63□□□□□ -1.99
SDC3O75056 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.63□□□□□ -1.99
SDC3O75056 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
SDC3O75056 AC114786.4-201ENST00000508771 728 ntBASIC2.63□□□□□ -1.99
SDC3O75056 AC114797.1-201ENST00000514003 728 ntBASIC2.63□□□□□ -1.99
SDC3O75056 AC116347.2-201ENST00000514912 523 ntBASIC2.63□□□□□ -1.99
SDC3O75056 RNU6-826P-201ENST00000516827 104 ntBASIC2.63□□□□□ -1.99
SDC3O75056 AP001646.1-201ENST00000527936 915 ntBASIC2.63□□□□□ -1.99
SDC3O75056 DUXAP5-201ENST00000529668 529 ntBASIC2.63□□□□□ -1.99
SDC3O75056 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SDC3O75056 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
SDC3O75056 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
SDC3O75056 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.63□□□□□ -1.99
SDC3O75056 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.63□□□□□ -1.99
SDC3O75056 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.63□□□□□ -1.99
SDC3O75056 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.63□□□□□ -1.99
SDC3O75056 AC027176.1-201ENST00000560204 514 ntBASIC2.63□□□□□ -1.99
SDC3O75056 AC103810.1-201ENST00000579873 453 ntBASIC2.63□□□□□ -1.99
SDC3O75056 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.63□□□□□ -1.99
SDC3O75056 KC877982.1-201ENST00000602313 470 ntBASIC2.63□□□□□ -1.99
SDC3O75056 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.63□□□□□ -1.99
SDC3O75056 AL020991.1-201ENST00000612314 373 ntBASIC2.63□□□□□ -1.99
SDC3O75056 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.63□□□□□ -1.99
SDC3O75056 AC093591.3-201ENST00000634516 308 ntBASIC2.63□□□□□ -1.99
SDC3O75056 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
SDC3O75056 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SDC3O75056 AL445523.1-201ENST00000451184 1362 ntBASIC2.62□□□□□ -1.99
SDC3O75056 AL161431.1-201ENST00000618966 4205 ntBASIC2.62□□□□□ -1.99
SDC3O75056 RNU5F-6P-201ENST00000362979 116 ntBASIC2.62□□□□□ -1.99
SDC3O75056 VTRNA1-1-201ENST00000363120 99 ntBASIC2.62□□□□□ -1.99
SDC3O75056 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.62□□□□□ -1.99
SDC3O75056 AC244035.1-201ENST00000430042 390 ntBASIC2.62□□□□□ -1.99
SDC3O75056 GTF2IP20-201ENST00000431663 360 ntBASIC2.62□□□□□ -1.99
SDC3O75056 AC112220.1-201ENST00000434628 355 ntBASIC2.62□□□□□ -1.99
SDC3O75056 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.62□□□□□ -1.99
SDC3O75056 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.62□□□□□ -1.99
SDC3O75056 AC118469.1-201ENST00000442943 488 ntBASIC2.62□□□□□ -1.99
SDC3O75056 AL133217.1-201ENST00000450980 425 ntBASIC2.62□□□□□ -1.99
SDC3O75056 ART2BP-201ENST00000453501 499 ntBASIC2.62□□□□□ -1.99
SDC3O75056 MRPS17P3-201ENST00000465453 385 ntBASIC2.62□□□□□ -1.99
SDC3O75056 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.62□□□□□ -1.99
SDC3O75056 AC090525.1-201ENST00000479116 478 ntBASIC2.62□□□□□ -1.99
SDC3O75056 RPL23AP70-201ENST00000483361 460 ntBASIC2.62□□□□□ -1.99
SDC3O75056 SRIP1-201ENST00000489235 288 ntBASIC2.62□□□□□ -1.99
SDC3O75056 AL160314.1-201ENST00000490836 438 ntBASIC2.62□□□□□ -1.99
SDC3O75056 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.62□□□□□ -1.99
SDC3O75056 SEM1P1-201ENST00000506694 209 ntBASIC2.62□□□□□ -1.99
SDC3O75056 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.62□□□□□ -1.99
SDC3O75056 MRPS36P2-201ENST00000512569 299 ntBASIC2.62□□□□□ -1.99
SDC3O75056 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.62□□□□□ -1.99
SDC3O75056 RN7SKP258-201ENST00000517151 304 ntBASIC2.62□□□□□ -1.99
SDC3O75056 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.62□□□□□ -1.99
SDC3O75056 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.62□□□□□ -1.99
SDC3O75056 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.62□□□□□ -1.99
SDC3O75056 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
SDC3O75056 AC025281.1-201ENST00000567026 265 ntBASIC2.62□□□□□ -1.99
SDC3O75056 AC145350.1-201ENST00000567426 208 ntBASIC2.62□□□□□ -1.99
SDC3O75056 MIR3146-201ENST00000580367 79 ntBASIC2.62□□□□□ -1.99
SDC3O75056 AC083760.1-201ENST00000589621 670 ntBASIC2.62□□□□□ -1.99
SDC3O75056 NIFKP6-201ENST00000598115 845 ntBASIC2.62□□□□□ -1.99
SDC3O75056 FTX_3.1-201ENST00000610451 147 ntBASIC2.62□□□□□ -1.99
SDC3O75056 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
SDC3O75056 AC090970.3-201ENST00000612566 866 ntBASIC2.62□□□□□ -1.99
SDC3O75056 AC122133.1-201ENST00000613964 233 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms