Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.87□□□□□ -2.11
SCN2BO60939 NANOGP2-201ENST00000435391 727 ntBASIC1.87□□□□□ -2.11
SCN2BO60939 AC096638.1-201ENST00000444678 216 ntBASIC1.87□□□□□ -2.11
SCN2BO60939 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.87□□□□□ -2.11
SCN2BO60939 MTAPP1-201ENST00000489154 819 ntBASIC1.87□□□□□ -2.11
SCN2BO60939 RPL9P6-201ENST00000492764 598 ntBASIC1.87□□□□□ -2.11
SCN2BO60939 RNU6-714P-201ENST00000516963 103 ntBASIC1.87□□□□□ -2.11
SCN2BO60939 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.87□□□□□ -2.11
SCN2BO60939 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.87□□□□□ -2.11
SCN2BO60939 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.87□□□□□ -2.11
SCN2BO60939 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.87□□□□□ -2.11
SCN2BO60939 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.87□□□□□ -2.11
SCN2BO60939 MIR1273D-201ENST00000577266 86 ntBASIC1.87□□□□□ -2.11
SCN2BO60939 AL139344.1-201ENST00000605228 195 ntBASIC1.87□□□□□ -2.11
SCN2BO60939 AC007038.2-201ENST00000608095 740 ntBASIC1.87□□□□□ -2.11
SCN2BO60939 Y_RNA.783-201ENST00000613546 102 ntBASIC1.87□□□□□ -2.11
SCN2BO60939 AC005296.1-201ENST00000616145 209 ntBASIC1.87□□□□□ -2.11
SCN2BO60939 AC003001.2-201ENST00000616294 831 ntBASIC1.87□□□□□ -2.11
SCN2BO60939 MIR219B-201ENST00000637023 88 ntBASIC1.87□□□□□ -2.11
SCN2BO60939 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
SCN2BO60939 AC103710.2-202ENST00000641454 2853 ntBASIC1.87□□□□□ -2.11
SCN2BO60939 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SCN2BO60939 RNU6-778P-201ENST00000363269 103 ntBASIC1.86□□□□□ -2.11
SCN2BO60939 RNU6-354P-201ENST00000383862 107 ntBASIC1.86□□□□□ -2.11
SCN2BO60939 RNU6-610P-201ENST00000384264 107 ntBASIC1.86□□□□□ -2.11
SCN2BO60939 RNU6-1122P-201ENST00000384449 107 ntBASIC1.86□□□□□ -2.11
SCN2BO60939 SNORD65.1-201ENST00000390889 71 ntBASIC1.86□□□□□ -2.11
SCN2BO60939 AL356421.1-201ENST00000403255 413 ntBASIC1.86□□□□□ -2.11
SCN2BO60939 SNORA3.2-201ENST00000408221 125 ntBASIC1.86□□□□□ -2.11
SCN2BO60939 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.86□□□□□ -2.11
SCN2BO60939 RPL17P12-201ENST00000413391 526 ntBASIC1.86□□□□□ -2.11
SCN2BO60939 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.86□□□□□ -2.11
SCN2BO60939 HMGN2P19-201ENST00000425149 265 ntBASIC1.86□□□□□ -2.11
SCN2BO60939 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.86□□□□□ -2.11
SCN2BO60939 ELOCP14-201ENST00000428070 331 ntBASIC1.86□□□□□ -2.11
SCN2BO60939 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SCN2BO60939 AL139415.2-201ENST00000431968 163 ntBASIC1.86□□□□□ -2.11
SCN2BO60939 RPL17P35-201ENST00000432217 549 ntBASIC1.86□□□□□ -2.11
SCN2BO60939 AL451074.3-201ENST00000437709 472 ntBASIC1.86□□□□□ -2.11
SCN2BO60939 ELOCP7-201ENST00000439968 331 ntBASIC1.86□□□□□ -2.11
SCN2BO60939 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.86□□□□□ -2.11
SCN2BO60939 DNAJC19P4-201ENST00000440115 345 ntBASIC1.86□□□□□ -2.11
SCN2BO60939 FAM103A2P-201ENST00000444122 354 ntBASIC1.86□□□□□ -2.11
SCN2BO60939 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.86□□□□□ -2.11
SCN2BO60939 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.86□□□□□ -2.11
SCN2BO60939 AL441985.1-201ENST00000457727 251 ntBASIC1.86□□□□□ -2.11
SCN2BO60939 AC008549.1-201ENST00000512900 643 ntBASIC1.86□□□□□ -2.11
SCN2BO60939 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.86□□□□□ -2.11
SCN2BO60939 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.86□□□□□ -2.11
SCN2BO60939 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SCN2BO60939 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.86□□□□□ -2.11
SCN2BO60939 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.86□□□□□ -2.11
SCN2BO60939 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.86□□□□□ -2.11
SCN2BO60939 SNRPGP19-201ENST00000603826 189 ntBASIC1.86□□□□□ -2.11
SCN2BO60939 AL355598.1-201ENST00000604169 202 ntBASIC1.86□□□□□ -2.11
SCN2BO60939 AL138963.2-201ENST00000605137 226 ntBASIC1.86□□□□□ -2.11
SCN2BO60939 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SCN2BO60939 MTND5P29-201ENST00000458676 1807 ntBASIC1.86□□□□□ -2.11
SCN2BO60939 AC011477.1-204ENST00000623416 1325 ntBASIC1.86□□□□□ -2.11
SCN2BO60939 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.85□□□□□ -2.11
SCN2BO60939 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
SCN2BO60939 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
SCN2BO60939 RNA5SP240-201ENST00000365355 128 ntBASIC1.85□□□□□ -2.11
SCN2BO60939 RNU6-19P-201ENST00000384718 107 ntBASIC1.85□□□□□ -2.11
SCN2BO60939 U8.14-201ENST00000390843 143 ntBASIC1.85□□□□□ -2.11
SCN2BO60939 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.85□□□□□ -2.11
SCN2BO60939 TPMTP2-201ENST00000414372 726 ntBASIC1.85□□□□□ -2.11
SCN2BO60939 EDDM3CP-201ENST00000415977 425 ntBASIC1.85□□□□□ -2.11
SCN2BO60939 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.85□□□□□ -2.11
SCN2BO60939 AC009238.1-201ENST00000442165 424 ntBASIC1.85□□□□□ -2.11
SCN2BO60939 AC009237.6-201ENST00000446969 424 ntBASIC1.85□□□□□ -2.11
SCN2BO60939 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.85□□□□□ -2.11
SCN2BO60939 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.85□□□□□ -2.11
SCN2BO60939 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.85□□□□□ -2.11
SCN2BO60939 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SCN2BO60939 AC092902.1-201ENST00000486999 259 ntBASIC1.85□□□□□ -2.11
SCN2BO60939 RN7SL274P-201ENST00000492268 272 ntBASIC1.85□□□□□ -2.11
SCN2BO60939 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.85□□□□□ -2.11
SCN2BO60939 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.85□□□□□ -2.11
SCN2BO60939 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.85□□□□□ -2.11
SCN2BO60939 AC091965.2-201ENST00000512324 613 ntBASIC1.85□□□□□ -2.11
SCN2BO60939 RN7SKP31-201ENST00000516354 278 ntBASIC1.85□□□□□ -2.11
SCN2BO60939 RNA5SP137-201ENST00000516833 135 ntBASIC1.85□□□□□ -2.11
SCN2BO60939 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.85□□□□□ -2.11
SCN2BO60939 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.85□□□□□ -2.11
SCN2BO60939 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.85□□□□□ -2.11
SCN2BO60939 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.85□□□□□ -2.11
SCN2BO60939 CYB5AP5-201ENST00000549779 389 ntBASIC1.85□□□□□ -2.11
SCN2BO60939 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.85□□□□□ -2.11
SCN2BO60939 AC021739.1-201ENST00000559631 174 ntBASIC1.85□□□□□ -2.11
SCN2BO60939 RPP40P2-201ENST00000603596 712 ntBASIC1.85□□□□□ -2.11
SCN2BO60939 MTCYBP22-201ENST00000603788 447 ntBASIC1.85□□□□□ -2.11
SCN2BO60939 AL355297.2-201ENST00000604792 129 ntBASIC1.85□□□□□ -2.11
SCN2BO60939 AC011939.3-201ENST00000613686 466 ntBASIC1.85□□□□□ -2.11
SCN2BO60939 MIR5739-201ENST00000619803 80 ntBASIC1.85□□□□□ -2.11
SCN2BO60939 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.85□□□□□ -2.11
SCN2BO60939 AC079416.3-201ENST00000624479 549 ntBASIC1.85□□□□□ -2.11
SCN2BO60939 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.85□□□□□ -2.11
SCN2BO60939 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.85□□□□□ -2.11
SCN2BO60939 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms