Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 AL590664.1-201ENST00000448065 339 ntBASIC4.79□□□□□ -1.64
SMARCA5O60264 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.79□□□□□ -1.64
SMARCA5O60264 AL356010.1-201ENST00000456364 102 ntBASIC4.79□□□□□ -1.64
SMARCA5O60264 RNU6-953P-201ENST00000459154 107 ntBASIC4.79□□□□□ -1.64
SMARCA5O60264 Y_RNA.631-201ENST00000459607 101 ntBASIC4.79□□□□□ -1.64
SMARCA5O60264 RPL23AP62-201ENST00000463396 453 ntBASIC4.79□□□□□ -1.64
SMARCA5O60264 AC130509.1-201ENST00000464158 433 ntBASIC4.79□□□□□ -1.64
SMARCA5O60264 AC006512.1-201ENST00000468816 291 ntBASIC4.79□□□□□ -1.64
SMARCA5O60264 AL163973.1-201ENST00000484753 577 ntBASIC4.79□□□□□ -1.64
SMARCA5O60264 AL160314.1-201ENST00000490836 438 ntBASIC4.79□□□□□ -1.64
SMARCA5O60264 AC021146.2-201ENST00000504736 556 ntBASIC4.79□□□□□ -1.64
SMARCA5O60264 HSPD1P15-201ENST00000505573 1122 ntBASIC4.79□□□□□ -1.64
SMARCA5O60264 RNA5SP208-201ENST00000516156 78 ntBASIC4.79□□□□□ -1.64
SMARCA5O60264 RN7SKP21-201ENST00000516503 220 ntBASIC4.79□□□□□ -1.64
SMARCA5O60264 HMGB1P41-201ENST00000520234 440 ntBASIC4.79□□□□□ -1.64
SMARCA5O60264 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.79□□□□□ -1.64
SMARCA5O60264 TRAV28-201ENST00000557548 323 ntBASIC4.79□□□□□ -1.64
SMARCA5O60264 AL606490.9-201ENST00000603331 271 ntBASIC4.79□□□□□ -1.64
SMARCA5O60264 FP236240.3-201ENST00000623061 327 ntBASIC4.79□□□□□ -1.64
SMARCA5O60264 AC027309.3-201ENST00000623419 351 ntBASIC4.79□□□□□ -1.64
SMARCA5O60264 AC138305.3-201ENST00000624988 240 ntBASIC4.79□□□□□ -1.64
SMARCA5O60264 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SMARCA5O60264 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SMARCA5O60264 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SMARCA5O60264 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SMARCA5O60264 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.78□□□□□ -1.64
SMARCA5O60264 AL049641.1-201ENST00000441055 1948 ntBASIC4.78□□□□□ -1.64
SMARCA5O60264 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SMARCA5O60264 RNU6-213P-201ENST00000384051 104 ntBASIC4.78□□□□□ -1.64
SMARCA5O60264 MIR514A2-201ENST00000385131 88 ntBASIC4.78□□□□□ -1.64
SMARCA5O60264 MIR514A3-201ENST00000385132 88 ntBASIC4.78□□□□□ -1.64
SMARCA5O60264 RNU2-39P-201ENST00000410604 198 ntBASIC4.78□□□□□ -1.64
SMARCA5O60264 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.78□□□□□ -1.64
SMARCA5O60264 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.78□□□□□ -1.64
SMARCA5O60264 AF228730.2-201ENST00000438784 848 ntBASIC4.78□□□□□ -1.64
SMARCA5O60264 Z82210.1-201ENST00000440037 231 ntBASIC4.78□□□□□ -1.64
SMARCA5O60264 NEFMP1-201ENST00000443423 1006 ntBASIC4.78□□□□□ -1.64
SMARCA5O60264 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.78□□□□□ -1.64
SMARCA5O60264 AL163540.1-201ENST00000485382 386 ntBASIC4.78□□□□□ -1.64
SMARCA5O60264 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.78□□□□□ -1.64
SMARCA5O60264 Y_RNA.665-201ENST00000516177 98 ntBASIC4.78□□□□□ -1.64
SMARCA5O60264 SCARNA14-201ENST00000516903 136 ntBASIC4.78□□□□□ -1.64
SMARCA5O60264 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.78□□□□□ -1.64
SMARCA5O60264 AC022695.1-201ENST00000522089 237 ntBASIC4.78□□□□□ -1.64
SMARCA5O60264 AP006587.4-201ENST00000526053 529 ntBASIC4.78□□□□□ -1.64
SMARCA5O60264 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.78□□□□□ -1.64
SMARCA5O60264 AC103843.2-201ENST00000530523 682 ntBASIC4.78□□□□□ -1.64
SMARCA5O60264 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.78□□□□□ -1.64
SMARCA5O60264 AC053481.4-201ENST00000583164 216 ntBASIC4.78□□□□□ -1.64
SMARCA5O60264 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.78□□□□□ -1.64
SMARCA5O60264 AC104763.2-201ENST00000604179 382 ntBASIC4.78□□□□□ -1.64
SMARCA5O60264 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.78□□□□□ -1.64
SMARCA5O60264 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
SMARCA5O60264 LINC02471-203ENST00000641941 4752 ntBASIC4.78□□□□□ -1.64
SMARCA5O60264 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SMARCA5O60264 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMARCA5O60264 IPO8P1-201ENST00000455509 3109 ntBASIC4.77□□□□□ -1.65
SMARCA5O60264 Y_RNA.145-201ENST00000363527 102 ntBASIC4.77□□□□□ -1.65
SMARCA5O60264 RNU6-701P-201ENST00000384059 107 ntBASIC4.77□□□□□ -1.65
SMARCA5O60264 SOD2P1-201ENST00000396543 562 ntBASIC4.77□□□□□ -1.65
SMARCA5O60264 RNU6-1304P-201ENST00000411374 106 ntBASIC4.77□□□□□ -1.65
SMARCA5O60264 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.77□□□□□ -1.65
SMARCA5O60264 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.77□□□□□ -1.65
SMARCA5O60264 AC007547.1-201ENST00000462177 490 ntBASIC4.77□□□□□ -1.65
SMARCA5O60264 AC069499.1-201ENST00000489433 509 ntBASIC4.77□□□□□ -1.65
SMARCA5O60264 RAC1P2-201ENST00000511164 579 ntBASIC4.77□□□□□ -1.65
SMARCA5O60264 Y_RNA.718-201ENST00000517110 102 ntBASIC4.77□□□□□ -1.65
SMARCA5O60264 RN7SKP256-201ENST00000517201 314 ntBASIC4.77□□□□□ -1.65
SMARCA5O60264 AC090877.1-201ENST00000561418 344 ntBASIC4.77□□□□□ -1.65
SMARCA5O60264 MIR4474-201ENST00000579189 78 ntBASIC4.77□□□□□ -1.65
SMARCA5O60264 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.77□□□□□ -1.65
SMARCA5O60264 AC067852.3-201ENST00000589177 561 ntBASIC4.77□□□□□ -1.65
SMARCA5O60264 AC025946.2-201ENST00000603398 234 ntBASIC4.77□□□□□ -1.65
SMARCA5O60264 AL080274.1-201ENST00000605565 220 ntBASIC4.77□□□□□ -1.65
SMARCA5O60264 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.77□□□□□ -1.65
SMARCA5O60264 AL138880.2-201ENST00000616214 239 ntBASIC4.77□□□□□ -1.65
SMARCA5O60264 AC068831.7-201ENST00000616954 363 ntBASIC4.77□□□□□ -1.65
SMARCA5O60264 MIR4727-201ENST00000622232 55 ntBASIC4.77□□□□□ -1.65
SMARCA5O60264 AL359757.2-201ENST00000624309 274 ntBASIC4.77□□□□□ -1.65
SMARCA5O60264 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMARCA5O60264 MTND5P16-201ENST00000460269 1703 ntBASIC4.77□□□□□ -1.65
SMARCA5O60264 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.77□□□□□ -1.65
SMARCA5O60264 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMARCA5O60264 MTND5P1-201ENST00000445440 1375 ntBASIC4.77□□□□□ -1.65
SMARCA5O60264 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMARCA5O60264 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMARCA5O60264 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMARCA5O60264 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SMARCA5O60264 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SMARCA5O60264 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.76□□□□□ -1.65
SMARCA5O60264 Y_RNA.367-201ENST00000365544 101 ntBASIC4.76□□□□□ -1.65
SMARCA5O60264 Y_RNA.422-201ENST00000384054 114 ntBASIC4.76□□□□□ -1.65
SMARCA5O60264 Y_RNA.459-201ENST00000384251 102 ntBASIC4.76□□□□□ -1.65
SMARCA5O60264 RNU6-39P-201ENST00000384344 107 ntBASIC4.76□□□□□ -1.65
SMARCA5O60264 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SMARCA5O60264 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SMARCA5O60264 AC113618.1-201ENST00000416747 285 ntBASIC4.76□□□□□ -1.65
SMARCA5O60264 HSPE1P1-201ENST00000421494 318 ntBASIC4.76□□□□□ -1.65
SMARCA5O60264 ERLEC1P1-201ENST00000433806 578 ntBASIC4.76□□□□□ -1.65
SMARCA5O60264 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms