Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AL450326.2-201ENST00000421913 1962 ntBASIC4.18□□□□□ -1.74
FOXN1O15353 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
FOXN1O15353 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.17□□□□□ -1.74
FOXN1O15353 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
FOXN1O15353 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
FOXN1O15353 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
FOXN1O15353 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
FOXN1O15353 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXN1O15353 Y_RNA.197-201ENST00000364004 102 ntBASIC4.17□□□□□ -1.74
FOXN1O15353 RNU6-283P-201ENST00000364788 107 ntBASIC4.17□□□□□ -1.74
FOXN1O15353 RNU4-20P-201ENST00000365601 151 ntBASIC4.17□□□□□ -1.74
FOXN1O15353 RNU6-505P-201ENST00000384427 107 ntBASIC4.17□□□□□ -1.74
FOXN1O15353 RNY4P36-201ENST00000391116 96 ntBASIC4.17□□□□□ -1.74
FOXN1O15353 AL031679.1-201ENST00000400616 525 ntBASIC4.17□□□□□ -1.74
FOXN1O15353 RPL31P52-201ENST00000407532 367 ntBASIC4.17□□□□□ -1.74
FOXN1O15353 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
FOXN1O15353 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.17□□□□□ -1.74
FOXN1O15353 RPS15AP12-201ENST00000419498 388 ntBASIC4.17□□□□□ -1.74
FOXN1O15353 ERLEC1P1-201ENST00000433806 578 ntBASIC4.17□□□□□ -1.74
FOXN1O15353 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXN1O15353 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXN1O15353 AL138799.3-201ENST00000438968 350 ntBASIC4.17□□□□□ -1.74
FOXN1O15353 UBL5P3-201ENST00000475112 231 ntBASIC4.17□□□□□ -1.74
FOXN1O15353 MTND4LP22-201ENST00000508209 276 ntBASIC4.17□□□□□ -1.74
FOXN1O15353 AC114797.1-201ENST00000514003 728 ntBASIC4.17□□□□□ -1.74
FOXN1O15353 RNU6-123P-201ENST00000516163 102 ntBASIC4.17□□□□□ -1.74
FOXN1O15353 AC008489.1-201ENST00000524271 483 ntBASIC4.17□□□□□ -1.74
FOXN1O15353 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.17□□□□□ -1.74
FOXN1O15353 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.17□□□□□ -1.74
FOXN1O15353 AL356432.3-201ENST00000568952 465 ntBASIC4.17□□□□□ -1.74
FOXN1O15353 APOOP1-201ENST00000604695 592 ntBASIC4.17□□□□□ -1.74
FOXN1O15353 CTHRC1P1-201ENST00000605383 469 ntBASIC4.17□□□□□ -1.74
FOXN1O15353 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.17□□□□□ -1.74
FOXN1O15353 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXN1O15353 uc_338.22-201ENST00000622722 187 ntBASIC4.17□□□□□ -1.74
FOXN1O15353 IGHVIII-44-202ENST00000636235 289 ntBASIC4.17□□□□□ -1.74
FOXN1O15353 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
FOXN1O15353 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.17□□□□□ -1.74
FOXN1O15353 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXN1O15353 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXN1O15353 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
FOXN1O15353 AC007656.2-201ENST00000624902 4547 ntBASIC4.16□□□□□ -1.74
FOXN1O15353 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
FOXN1O15353 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXN1O15353 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
FOXN1O15353 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
FOXN1O15353 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXN1O15353 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXN1O15353 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
FOXN1O15353 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
FOXN1O15353 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXN1O15353 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXN1O15353 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXN1O15353 RNA5SP502-201ENST00000362694 119 ntBASIC4.16□□□□□ -1.74
FOXN1O15353 Y_RNA.301-201ENST00000364990 103 ntBASIC4.16□□□□□ -1.74
FOXN1O15353 Y_RNA.373-201ENST00000365600 103 ntBASIC4.16□□□□□ -1.74
FOXN1O15353 RNU6-1106P-201ENST00000390845 107 ntBASIC4.16□□□□□ -1.74
FOXN1O15353 EIF5P1-201ENST00000400019 1231 ntBASIC4.16□□□□□ -1.74
FOXN1O15353 AL138885.1-201ENST00000405921 675 ntBASIC4.16□□□□□ -1.74
FOXN1O15353 USP9YP16-201ENST00000430287 407 ntBASIC4.16□□□□□ -1.74
FOXN1O15353 SETP5-201ENST00000437270 562 ntBASIC4.16□□□□□ -1.74
FOXN1O15353 AL049734.2-201ENST00000441066 616 ntBASIC4.16□□□□□ -1.74
FOXN1O15353 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.16□□□□□ -1.74
FOXN1O15353 AL513124.1-201ENST00000450410 614 ntBASIC4.16□□□□□ -1.74
FOXN1O15353 AC239809.1-201ENST00000450470 217 ntBASIC4.16□□□□□ -1.74
FOXN1O15353 USP9YP23-201ENST00000455085 407 ntBASIC4.16□□□□□ -1.74
FOXN1O15353 RNU7-152P-201ENST00000458982 64 ntBASIC4.16□□□□□ -1.74
FOXN1O15353 AC104563.1-201ENST00000476147 376 ntBASIC4.16□□□□□ -1.74
FOXN1O15353 AC012181.1-201ENST00000479895 423 ntBASIC4.16□□□□□ -1.74
FOXN1O15353 AC106872.2-201ENST00000494303 480 ntBASIC4.16□□□□□ -1.74
FOXN1O15353 AC090453.1-201ENST00000495560 436 ntBASIC4.16□□□□□ -1.74
FOXN1O15353 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.16□□□□□ -1.74
FOXN1O15353 RNU6-488P-201ENST00000515918 99 ntBASIC4.16□□□□□ -1.74
FOXN1O15353 RNA5SP337-201ENST00000517007 109 ntBASIC4.16□□□□□ -1.74
FOXN1O15353 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.16□□□□□ -1.74
FOXN1O15353 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.16□□□□□ -1.74
FOXN1O15353 COPS8P3-201ENST00000526024 482 ntBASIC4.16□□□□□ -1.74
FOXN1O15353 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.16□□□□□ -1.74
FOXN1O15353 AC007390.2-201ENST00000606229 3803 ntBASIC4.16□□□□□ -1.74
FOXN1O15353 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.16□□□□□ -1.74
FOXN1O15353 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXN1O15353 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
FOXN1O15353 MTND5P33-201ENST00000571250 1450 ntBASIC4.16□□□□□ -1.74
FOXN1O15353 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXN1O15353 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.15□□□□□ -1.74
FOXN1O15353 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
FOXN1O15353 AC027290.2-201ENST00000623210 18662 ntBASIC4.15□□□□□ -1.74
FOXN1O15353 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
FOXN1O15353 RNU4-82P-201ENST00000362443 140 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
FOXN1O15353 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
FOXN1O15353 RNU6-444P-201ENST00000383988 108 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 Y_RNA.452-201ENST00000384202 108 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 MIR514A2-201ENST00000385131 88 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 MIR514A3-201ENST00000385132 88 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 MIR708-201ENST00000390708 88 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 SNORD37.1-201ENST00000390968 65 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 RNA5SP424-201ENST00000390988 115 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
FOXN1O15353 MTCYBP4-201ENST00000401524 249 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms