Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AC007375.1-201ENST00000554513 578 ntBASIC1.7□□□□□ -2.14
UBFD1O14562 AC087465.1-201ENST00000560574 245 ntBASIC1.7□□□□□ -2.14
UBFD1O14562 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.7□□□□□ -2.14
UBFD1O14562 MIR5708-201ENST00000579723 85 ntBASIC1.7□□□□□ -2.14
UBFD1O14562 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.7□□□□□ -2.14
UBFD1O14562 SNORD14A-201ENST00000606526 91 ntBASIC1.7□□□□□ -2.14
UBFD1O14562 AL158211.4-201ENST00000606988 584 ntBASIC1.7□□□□□ -2.14
UBFD1O14562 AC005332.6-201ENST00000613178 446 ntBASIC1.7□□□□□ -2.14
UBFD1O14562 AC012150.2-201ENST00000621300 544 ntBASIC1.7□□□□□ -2.14
UBFD1O14562 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.7□□□□□ -2.14
UBFD1O14562 AC068880.4-201ENST00000623082 495 ntBASIC1.7□□□□□ -2.14
UBFD1O14562 AC093875.1-201ENST00000623688 504 ntBASIC1.7□□□□□ -2.14
UBFD1O14562 OR1S1-201ENST00000624470 978 ntBASIC1.7□□□□□ -2.14
UBFD1O14562 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.7□□□□□ -2.14
UBFD1O14562 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.69□□□□□ -2.14
UBFD1O14562 AC107982.1-201ENST00000507171 1300 ntBASIC1.69□□□□□ -2.14
UBFD1O14562 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
UBFD1O14562 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.69□□□□□ -2.14
UBFD1O14562 Y_RNA.4-201ENST00000362333 112 ntBASIC1.69□□□□□ -2.14
UBFD1O14562 RNU5B-4P-201ENST00000363508 111 ntBASIC1.69□□□□□ -2.14
UBFD1O14562 SNORA3A-201ENST00000364113 130 ntBASIC1.69□□□□□ -2.14
UBFD1O14562 RNU6-217P-201ENST00000384164 104 ntBASIC1.69□□□□□ -2.14
UBFD1O14562 AL079342.2-201ENST00000403367 482 ntBASIC1.69□□□□□ -2.14
UBFD1O14562 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.69□□□□□ -2.14
UBFD1O14562 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.69□□□□□ -2.14
UBFD1O14562 AC008850.1-201ENST00000427546 362 ntBASIC1.69□□□□□ -2.14
UBFD1O14562 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.69□□□□□ -2.14
UBFD1O14562 AL590383.1-201ENST00000428602 75 ntBASIC1.69□□□□□ -2.14
UBFD1O14562 MTCO1P3-201ENST00000429327 192 ntBASIC1.69□□□□□ -2.14
UBFD1O14562 AC007919.1-201ENST00000429380 217 ntBASIC1.69□□□□□ -2.14
UBFD1O14562 AL645568.3-201ENST00000433683 316 ntBASIC1.69□□□□□ -2.14
UBFD1O14562 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.69□□□□□ -2.14
UBFD1O14562 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.69□□□□□ -2.14
UBFD1O14562 SDCBPP1-201ENST00000440192 890 ntBASIC1.69□□□□□ -2.14
UBFD1O14562 PIGFP3-201ENST00000441918 722 ntBASIC1.69□□□□□ -2.14
UBFD1O14562 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
UBFD1O14562 RPL12P25-201ENST00000455592 494 ntBASIC1.69□□□□□ -2.14
UBFD1O14562 AC034222.1-201ENST00000494052 532 ntBASIC1.69□□□□□ -2.14
UBFD1O14562 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.69□□□□□ -2.14
UBFD1O14562 RNU6-1053P-201ENST00000515930 101 ntBASIC1.69□□□□□ -2.14
UBFD1O14562 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.69□□□□□ -2.14
UBFD1O14562 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.69□□□□□ -2.14
UBFD1O14562 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
UBFD1O14562 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.69□□□□□ -2.14
UBFD1O14562 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.69□□□□□ -2.14
UBFD1O14562 AC104581.2-201ENST00000572227 430 ntBASIC1.69□□□□□ -2.14
UBFD1O14562 MIR3618-201ENST00000580330 88 ntBASIC1.69□□□□□ -2.14
UBFD1O14562 AC005498.1-201ENST00000592125 465 ntBASIC1.69□□□□□ -2.14
UBFD1O14562 AC080013.4-201ENST00000607624 649 ntBASIC1.69□□□□□ -2.14
UBFD1O14562 AC107214.2-201ENST00000608204 634 ntBASIC1.69□□□□□ -2.14
UBFD1O14562 AC002550.2-201ENST00000621246 394 ntBASIC1.69□□□□□ -2.14
UBFD1O14562 AC091948.2-201ENST00000636510 279 ntBASIC1.69□□□□□ -2.14
UBFD1O14562 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.68□□□□□ -2.14
UBFD1O14562 CCT4P2-201ENST00000233836 1548 ntBASIC1.68□□□□□ -2.14
UBFD1O14562 RNU6-28P-201ENST00000362378 107 ntBASIC1.68□□□□□ -2.14
UBFD1O14562 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
UBFD1O14562 SNORA40.18-201ENST00000391200 128 ntBASIC1.68□□□□□ -2.14
UBFD1O14562 RNU2-49P-201ENST00000410666 184 ntBASIC1.68□□□□□ -2.14
UBFD1O14562 USP9YP19-201ENST00000412165 485 ntBASIC1.68□□□□□ -2.14
UBFD1O14562 RPS7P9-201ENST00000414704 586 ntBASIC1.68□□□□□ -2.14
UBFD1O14562 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.68□□□□□ -2.14
UBFD1O14562 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.68□□□□□ -2.14
UBFD1O14562 AL109913.1-201ENST00000421173 514 ntBASIC1.68□□□□□ -2.14
UBFD1O14562 AC098614.2-201ENST00000426040 255 ntBASIC1.68□□□□□ -2.14
UBFD1O14562 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.68□□□□□ -2.14
UBFD1O14562 USP9YP22-201ENST00000438971 294 ntBASIC1.68□□□□□ -2.14
UBFD1O14562 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.68□□□□□ -2.14
UBFD1O14562 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.68□□□□□ -2.14
UBFD1O14562 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.68□□□□□ -2.14
UBFD1O14562 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.68□□□□□ -2.14
UBFD1O14562 AC104564.1-201ENST00000493028 407 ntBASIC1.68□□□□□ -2.14
UBFD1O14562 RPL23AP63-201ENST00000498752 471 ntBASIC1.68□□□□□ -2.14
UBFD1O14562 FAM92A1P2-202ENST00000504766 877 ntBASIC1.68□□□□□ -2.14
UBFD1O14562 HMGB1P28-201ENST00000507778 552 ntBASIC1.68□□□□□ -2.14
UBFD1O14562 Y_RNA.673-201ENST00000516306 88 ntBASIC1.68□□□□□ -2.14
UBFD1O14562 BTF3P12-201ENST00000519620 469 ntBASIC1.68□□□□□ -2.14
UBFD1O14562 AC104417.1-201ENST00000523974 751 ntBASIC1.68□□□□□ -2.14
UBFD1O14562 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.68□□□□□ -2.14
UBFD1O14562 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
UBFD1O14562 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.68□□□□□ -2.14
UBFD1O14562 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.68□□□□□ -2.14
UBFD1O14562 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.68□□□□□ -2.14
UBFD1O14562 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.68□□□□□ -2.14
UBFD1O14562 MIR3122-201ENST00000577243 73 ntBASIC1.68□□□□□ -2.14
UBFD1O14562 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.68□□□□□ -2.14
UBFD1O14562 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.68□□□□□ -2.14
UBFD1O14562 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.68□□□□□ -2.14
UBFD1O14562 AL096840.1-201ENST00000603287 93 ntBASIC1.68□□□□□ -2.14
UBFD1O14562 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.68□□□□□ -2.14
UBFD1O14562 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
UBFD1O14562 ADAM3A-203ENST00000461344 2157 ntBASIC1.68□□□□□ -2.14
UBFD1O14562 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
UBFD1O14562 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
UBFD1O14562 Y_RNA.234-201ENST00000364409 97 ntBASIC1.67□□□□□ -2.14
UBFD1O14562 SNORA16B-201ENST00000364674 135 ntBASIC1.67□□□□□ -2.14
UBFD1O14562 RNA5SP213-201ENST00000391031 106 ntBASIC1.67□□□□□ -2.14
UBFD1O14562 RNU6-952P-201ENST00000391164 108 ntBASIC1.67□□□□□ -2.14
UBFD1O14562 RPL23AP29-201ENST00000397284 453 ntBASIC1.67□□□□□ -2.14
UBFD1O14562 FGF7P8-201ENST00000402994 292 ntBASIC1.67□□□□□ -2.14
UBFD1O14562 AC007560.1-201ENST00000426912 237 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms