Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RTCAO00442 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.91□□□□□ -1.94
RTCAO00442 RNA5SP290-201ENST00000517133 127 ntBASIC2.91□□□□□ -1.94
RTCAO00442 AC245166.1-201ENST00000521012 253 ntBASIC2.91□□□□□ -1.94
RTCAO00442 AC107934.1-201ENST00000522215 217 ntBASIC2.91□□□□□ -1.94
RTCAO00442 MIR5004-201ENST00000579078 107 ntBASIC2.91□□□□□ -1.94
RTCAO00442 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.91□□□□□ -1.94
RTCAO00442 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.91□□□□□ -1.94
RTCAO00442 BNIP3P8-201ENST00000597863 560 ntBASIC2.91□□□□□ -1.94
RTCAO00442 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.91□□□□□ -1.94
RTCAO00442 YPEL5P2-201ENST00000605553 359 ntBASIC2.91□□□□□ -1.94
RTCAO00442 AL391813.2-201ENST00000609113 322 ntBASIC2.91□□□□□ -1.94
RTCAO00442 AC103710.1-201ENST00000610003 901 ntBASIC2.91□□□□□ -1.94
RTCAO00442 AC096577.2-201ENST00000611455 153 ntBASIC2.91□□□□□ -1.94
RTCAO00442 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.91□□□□□ -1.94
RTCAO00442 AC091304.9-201ENST00000612091 226 ntBASIC2.91□□□□□ -1.94
RTCAO00442 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.91□□□□□ -1.94
RTCAO00442 SNHG22-203ENST00000617833 660 ntBASIC2.91□□□□□ -1.94
RTCAO00442 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.91□□□□□ -1.94
RTCAO00442 AC091953.2-201ENST00000623979 160 ntBASIC2.91□□□□□ -1.94
RTCAO00442 MIR7515-201ENST00000637837 67 ntBASIC2.91□□□□□ -1.94
RTCAO00442 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
RTCAO00442 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
RTCAO00442 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
RTCAO00442 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
RTCAO00442 AC073325.2-201ENST00000339545 159 ntBASIC2.9□□□□□ -1.95
RTCAO00442 SNORA54-201ENST00000384281 123 ntBASIC2.9□□□□□ -1.95
RTCAO00442 Y_RNA.553-201ENST00000384670 102 ntBASIC2.9□□□□□ -1.95
RTCAO00442 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.9□□□□□ -1.95
RTCAO00442 RPS3AP3-201ENST00000411933 242 ntBASIC2.9□□□□□ -1.95
RTCAO00442 AL365338.1-201ENST00000422282 858 ntBASIC2.9□□□□□ -1.95
RTCAO00442 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.9□□□□□ -1.95
RTCAO00442 SNRPEP9-201ENST00000436794 238 ntBASIC2.9□□□□□ -1.95
RTCAO00442 MTCO2P16-201ENST00000436962 677 ntBASIC2.9□□□□□ -1.95
RTCAO00442 MTND4P32-201ENST00000437189 1237 ntBASIC2.9□□□□□ -1.95
RTCAO00442 AC020550.1-201ENST00000447385 163 ntBASIC2.9□□□□□ -1.95
RTCAO00442 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.9□□□□□ -1.95
RTCAO00442 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.9□□□□□ -1.95
RTCAO00442 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.9□□□□□ -1.95
RTCAO00442 RPL12P25-201ENST00000455592 494 ntBASIC2.9□□□□□ -1.95
RTCAO00442 snoU109.1-201ENST00000459339 135 ntBASIC2.9□□□□□ -1.95
RTCAO00442 AC008481.1-201ENST00000463278 396 ntBASIC2.9□□□□□ -1.95
RTCAO00442 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.9□□□□□ -1.95
RTCAO00442 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.9□□□□□ -1.95
RTCAO00442 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.9□□□□□ -1.95
RTCAO00442 NDUFB4P2-201ENST00000509515 391 ntBASIC2.9□□□□□ -1.95
RTCAO00442 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
RTCAO00442 AC008885.1-201ENST00000514930 301 ntBASIC2.9□□□□□ -1.95
RTCAO00442 RNU5F-8P-201ENST00000515941 111 ntBASIC2.9□□□□□ -1.95
RTCAO00442 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.9□□□□□ -1.95
RTCAO00442 AP000873.5-201ENST00000533906 236 ntBASIC2.9□□□□□ -1.95
RTCAO00442 AC007115.1-201ENST00000546853 234 ntBASIC2.9□□□□□ -1.95
RTCAO00442 AC093012.1-202ENST00000549403 582 ntBASIC2.9□□□□□ -1.95
RTCAO00442 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.9□□□□□ -1.95
RTCAO00442 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.9□□□□□ -1.95
RTCAO00442 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.9□□□□□ -1.95
RTCAO00442 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.9□□□□□ -1.95
RTCAO00442 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.9□□□□□ -1.95
RTCAO00442 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.9□□□□□ -1.95
RTCAO00442 AL356280.1-201ENST00000603614 379 ntBASIC2.9□□□□□ -1.95
RTCAO00442 AC064872.1-201ENST00000604823 1072 ntBASIC2.9□□□□□ -1.95
RTCAO00442 AC109347.2-201ENST00000610220 349 ntBASIC2.9□□□□□ -1.95
RTCAO00442 AC013562.2-201ENST00000611632 603 ntBASIC2.9□□□□□ -1.95
RTCAO00442 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.9□□□□□ -1.95
RTCAO00442 AP001506.1-201ENST00000615444 211 ntBASIC2.9□□□□□ -1.95
RTCAO00442 AC009509.4-201ENST00000619202 509 ntBASIC2.9□□□□□ -1.95
RTCAO00442 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
RTCAO00442 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
RTCAO00442 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.9□□□□□ -1.95
RTCAO00442 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
RTCAO00442 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.9□□□□□ -1.95
RTCAO00442 MIR22-201ENST00000362190 85 ntBASIC2.89□□□□□ -1.95
RTCAO00442 RNU6-511P-201ENST00000363496 107 ntBASIC2.89□□□□□ -1.95
RTCAO00442 Y_RNA.245-201ENST00000364493 95 ntBASIC2.89□□□□□ -1.95
RTCAO00442 RNU6-278P-201ENST00000390945 109 ntBASIC2.89□□□□□ -1.95
RTCAO00442 AL359634.1-202ENST00000404721 284 ntBASIC2.89□□□□□ -1.95
RTCAO00442 FCF1P10-201ENST00000407590 479 ntBASIC2.89□□□□□ -1.95
RTCAO00442 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.89□□□□□ -1.95
RTCAO00442 AC006366.1-201ENST00000422002 759 ntBASIC2.89□□□□□ -1.95
RTCAO00442 ELOCP14-201ENST00000428070 331 ntBASIC2.89□□□□□ -1.95
RTCAO00442 ELOCP7-201ENST00000439968 331 ntBASIC2.89□□□□□ -1.95
RTCAO00442 AL360221.1-201ENST00000445989 335 ntBASIC2.89□□□□□ -1.95
RTCAO00442 DPPA3P1-201ENST00000448050 469 ntBASIC2.89□□□□□ -1.95
RTCAO00442 snoU13.22-201ENST00000459428 104 ntBASIC2.89□□□□□ -1.95
RTCAO00442 ARL2BPP4-201ENST00000506854 471 ntBASIC2.89□□□□□ -1.95
RTCAO00442 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RTCAO00442 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.89□□□□□ -1.95
RTCAO00442 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.89□□□□□ -1.95
RTCAO00442 AC091965.2-201ENST00000512324 613 ntBASIC2.89□□□□□ -1.95
RTCAO00442 RNU6-64P-201ENST00000517119 105 ntBASIC2.89□□□□□ -1.95
RTCAO00442 AP002963.1-201ENST00000530590 184 ntBASIC2.89□□□□□ -1.95
RTCAO00442 AC110491.1-201ENST00000562191 2010 ntBASIC2.89□□□□□ -1.95
RTCAO00442 MIR3682-201ENST00000581338 84 ntBASIC2.89□□□□□ -1.95
RTCAO00442 HMGN1P30-201ENST00000589286 268 ntBASIC2.89□□□□□ -1.95
RTCAO00442 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.89□□□□□ -1.95
RTCAO00442 AC007318.2-201ENST00000620999 243 ntBASIC2.89□□□□□ -1.95
RTCAO00442 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.89□□□□□ -1.95
RTCAO00442 MIR3651-201ENST00000630427 90 ntBASIC2.89□□□□□ -1.95
RTCAO00442 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RTCAO00442 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms