Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AC034105.3-201ENST00000565294 442 ntBASIC3.29□□□□□ -1.88
LRRC53A6NM62 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.29□□□□□ -1.88
LRRC53A6NM62 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRC53A6NM62 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRC53A6NM62 AC025449.1-201ENST00000603896 529 ntBASIC3.29□□□□□ -1.88
LRRC53A6NM62 AL161798.1-201ENST00000604630 131 ntBASIC3.29□□□□□ -1.88
LRRC53A6NM62 AL158209.2-201ENST00000619266 216 ntBASIC3.29□□□□□ -1.88
LRRC53A6NM62 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LRRC53A6NM62 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LRRC53A6NM62 AC008264.2-201ENST00000610193 3731 ntBASIC3.29□□□□□ -1.88
LRRC53A6NM62 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LRRC53A6NM62 AC118273.1-201ENST00000525324 3006 ntBASIC3.29□□□□□ -1.88
LRRC53A6NM62 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LRRC53A6NM62 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.29□□□□□ -1.88
LRRC53A6NM62 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.28□□□□□ -1.88
LRRC53A6NM62 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LRRC53A6NM62 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
LRRC53A6NM62 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LRRC53A6NM62 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LRRC53A6NM62 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
LRRC53A6NM62 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LRRC53A6NM62 RNU6-512P-201ENST00000364438 103 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 SNORD15B-201ENST00000384714 146 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 RNU4-55P-201ENST00000410731 137 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 RNA5SP38-201ENST00000410750 119 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.28□□□□□ -1.88
LRRC53A6NM62 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LRRC53A6NM62 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.28□□□□□ -1.88
LRRC53A6NM62 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.28□□□□□ -1.88
LRRC53A6NM62 AC069157.1-201ENST00000421749 137 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 MTCO2P19-201ENST00000427513 598 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 AC002486.1-201ENST00000435098 391 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 AC009969.1-201ENST00000438726 172 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.28□□□□□ -1.88
LRRC53A6NM62 HMGN2P13-201ENST00000476476 274 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 AC109925.1-201ENST00000478069 331 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 AC116562.3-201ENST00000506136 177 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.28□□□□□ -1.88
LRRC53A6NM62 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.28□□□□□ -1.88
LRRC53A6NM62 RNU6-928P-201ENST00000516876 104 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 RNA5SP290-201ENST00000517133 127 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 RNA5SP291-201ENST00000517222 105 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 MTCYBP20-201ENST00000524239 1129 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.28□□□□□ -1.88
LRRC53A6NM62 ATP5F1P5-201ENST00000526403 760 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 AC068587.5-201ENST00000528506 175 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.28□□□□□ -1.88
LRRC53A6NM62 EIF1P4-201ENST00000572664 335 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 AC068790.6-201ENST00000602558 258 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 AC136601.2-201ENST00000604356 474 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 AC012557.2-201ENST00000605919 418 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
LRRC53A6NM62 AC130324.3-201ENST00000614165 542 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 AC007318.2-201ENST00000620999 243 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 AC006111.3-201ENST00000622137 383 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 AC099506.2-201ENST00000623074 221 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 AC018692.3-201ENST00000623929 123 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.28□□□□□ -1.88
LRRC53A6NM62 MIR6863-201ENST00000636112 90 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 U6.105-201ENST00000637379 88 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 MTND5P42-201ENST00000637720 498 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 AC099654.12-201ENST00000639868 649 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 TPTE2P4-201ENST00000258589 1605 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LRRC53A6NM62 MTND5P29-201ENST00000458676 1807 ntBASIC3.28□□□□□ -1.88
LRRC53A6NM62 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.27□□□□□ -1.89
LRRC53A6NM62 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.27□□□□□ -1.89
LRRC53A6NM62 Y_RNA.1-201ENST00000352915 104 ntBASIC3.27□□□□□ -1.89
LRRC53A6NM62 RNU6-270P-201ENST00000364131 105 ntBASIC3.27□□□□□ -1.89
LRRC53A6NM62 RNU6-817P-201ENST00000391083 104 ntBASIC3.27□□□□□ -1.89
LRRC53A6NM62 RNU2-9P-201ENST00000410194 145 ntBASIC3.27□□□□□ -1.89
LRRC53A6NM62 RPS12P24-201ENST00000412619 387 ntBASIC3.27□□□□□ -1.89
LRRC53A6NM62 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.27□□□□□ -1.89
LRRC53A6NM62 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.27□□□□□ -1.89
LRRC53A6NM62 AL451062.2-201ENST00000427515 271 ntBASIC3.27□□□□□ -1.89
LRRC53A6NM62 AC244505.4-201ENST00000434905 287 ntBASIC3.27□□□□□ -1.89
LRRC53A6NM62 HIGD1AP11-201ENST00000438361 280 ntBASIC3.27□□□□□ -1.89
LRRC53A6NM62 RPS24P13-201ENST00000442520 397 ntBASIC3.27□□□□□ -1.89
LRRC53A6NM62 SSXP5-201ENST00000443473 287 ntBASIC3.27□□□□□ -1.89
LRRC53A6NM62 RPL21P133-201ENST00000443666 476 ntBASIC3.27□□□□□ -1.89
LRRC53A6NM62 MTND1P1-201ENST00000445453 368 ntBASIC3.27□□□□□ -1.89
LRRC53A6NM62 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.27□□□□□ -1.89
LRRC53A6NM62 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LRRC53A6NM62 AC093899.1-201ENST00000457984 376 ntBASIC3.27□□□□□ -1.89
LRRC53A6NM62 RNU6-420P-201ENST00000458780 107 ntBASIC3.27□□□□□ -1.89
LRRC53A6NM62 AP004217.1-201ENST00000480579 346 ntBASIC3.27□□□□□ -1.89
LRRC53A6NM62 AC108078.2-201ENST00000510750 236 ntBASIC3.27□□□□□ -1.89
LRRC53A6NM62 Y_RNA.689-201ENST00000516589 107 ntBASIC3.27□□□□□ -1.89
LRRC53A6NM62 RNU6-711P-201ENST00000517255 106 ntBASIC3.27□□□□□ -1.89
LRRC53A6NM62 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.27□□□□□ -1.89
LRRC53A6NM62 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.27□□□□□ -1.89
LRRC53A6NM62 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.27□□□□□ -1.89
LRRC53A6NM62 AL020997.2-201ENST00000602607 184 ntBASIC3.27□□□□□ -1.89
LRRC53A6NM62 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.27□□□□□ -1.89
LRRC53A6NM62 AL359740.1-201ENST00000624340 592 ntBASIC3.27□□□□□ -1.89
LRRC53A6NM62 AC124864.2-201ENST00000624736 186 ntBASIC3.27□□□□□ -1.89
LRRC53A6NM62 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.27□□□□□ -1.89
LRRC53A6NM62 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LRRC53A6NM62 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms