Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC2.97□□□□□ -1.93
IGHV4-28A0A0C4DH34 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
IGHV4-28A0A0C4DH34 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC2.97□□□□□ -1.93
IGHV4-28A0A0C4DH34 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
IGHV4-28A0A0C4DH34 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
IGHV4-28A0A0C4DH34 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
IGHV4-28A0A0C4DH34 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC2.96□□□□□ -1.93
IGHV4-28A0A0C4DH34 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC2.96□□□□□ -1.93
IGHV4-28A0A0C4DH34 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 NCAPGP1-201ENST00000505112 1814 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 AL049641.1-201ENST00000441055 1948 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 AC138393.1-203ENST00000327086 343 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 SNORA60-201ENST00000362396 134 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 SNORD35B-201ENST00000363660 87 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 RHOT1P2-201ENST00000366423 333 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 SNORD116-11-201ENST00000383882 92 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 Y_RNA.384-201ENST00000383909 102 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 Y_RNA.480-201ENST00000384364 102 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 RNU6-140P-201ENST00000384566 108 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 SNORA57.1-201ENST00000391227 145 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 MIR548K-201ENST00000408406 116 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 RNU2-3P-201ENST00000410144 191 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 RNU2-68P-201ENST00000410878 191 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 RNU6-607P-201ENST00000411283 108 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 RPS20P15-201ENST00000412792 311 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 CYCSP33-201ENST00000414485 327 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 AC069285.2-201ENST00000440210 275 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 RPL32P28-201ENST00000443577 397 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 AC107399.1-201ENST00000451226 265 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 Y_RNA.632-201ENST00000459189 102 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 AC026402.1-201ENST00000513642 170 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 RN7SKP13-201ENST00000515933 244 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 RNU1-86P-201ENST00000516108 154 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 RNA5SP360-201ENST00000516555 118 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 RNU1-107P-201ENST00000516617 154 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 AC025755.1-201ENST00000521306 278 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 OR8R1P-201ENST00000543943 764 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 AC025423.5-201ENST00000550230 219 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 MIR5684-201ENST00000585074 65 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 POLR3GP2-201ENST00000588366 668 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 NUTF2P8-201ENST00000604593 363 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 APOOP1-201ENST00000604695 592 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 AC245389.1-201ENST00000605141 529 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 AL442067.2-201ENST00000614033 363 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 AC090574.1-201ENST00000623186 233 ntBASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 ALG13-230ENST00000623189 458 ntTSL 3 BASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
IGHV4-28A0A0C4DH34 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 RNU4-76P-201ENST00000364509 141 ntBASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 RNA5SP513-201ENST00000364648 118 ntBASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 Y_RNA.339-201ENST00000365325 102 ntBASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 RNA5SP283-201ENST00000365604 119 ntBASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 RNU4-6P-201ENST00000410804 122 ntBASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 RNU4-14P-201ENST00000410858 122 ntBASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 AL139396.1-201ENST00000421137 167 ntBASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 AC092047.1-201ENST00000424997 240 ntBASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 HMGB1P9-201ENST00000429856 646 ntBASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 RPL23AP69-201ENST00000431134 458 ntBASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 MYL8P-204ENST00000431574 518 ntBASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 SNRPEP9-201ENST00000436794 238 ntBASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 AL353748.1-201ENST00000440753 474 ntBASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 HMGB1P30-201ENST00000492455 606 ntBASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 AC008526.1-201ENST00000509149 338 ntBASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 MIR892C-201ENST00000516410 77 ntBASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 AC009902.1-201ENST00000519351 183 ntBASIC2.95□□□□□ -1.94
IGHV4-28A0A0C4DH34 AC087369.1-201ENST00000520775 996 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms