Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 HIGD1AP13-201ENST00000509878 289 ntBASIC2.56□□□□□ -2
AP4B1Q9Y6B7 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.56□□□□□ -2
AP4B1Q9Y6B7 SNORA3.4-201ENST00000515969 96 ntBASIC2.56□□□□□ -2
AP4B1Q9Y6B7 RNU6-678P-201ENST00000516832 109 ntBASIC2.56□□□□□ -2
AP4B1Q9Y6B7 RNA5SP402-201ENST00000517148 110 ntBASIC2.56□□□□□ -2
AP4B1Q9Y6B7 RN7SKP258-201ENST00000517151 304 ntBASIC2.56□□□□□ -2
AP4B1Q9Y6B7 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
AP4B1Q9Y6B7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.56□□□□□ -2
AP4B1Q9Y6B7 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.56□□□□□ -2
AP4B1Q9Y6B7 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.56□□□□□ -2
AP4B1Q9Y6B7 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.56□□□□□ -2
AP4B1Q9Y6B7 EIF4BP1-201ENST00000554881 351 ntBASIC2.56□□□□□ -2
AP4B1Q9Y6B7 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.56□□□□□ -2
AP4B1Q9Y6B7 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.56□□□□□ -2
AP4B1Q9Y6B7 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.56□□□□□ -2
AP4B1Q9Y6B7 ELOCP29-201ENST00000588193 334 ntBASIC2.56□□□□□ -2
AP4B1Q9Y6B7 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.56□□□□□ -2
AP4B1Q9Y6B7 AL137847.3-201ENST00000611521 109 ntBASIC2.56□□□□□ -2
AP4B1Q9Y6B7 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.56□□□□□ -2
AP4B1Q9Y6B7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.56□□□□□ -2
AP4B1Q9Y6B7 SCARNA15.3-201ENST00000626315 122 ntBASIC2.56□□□□□ -2
AP4B1Q9Y6B7 SCARNA4.1-201ENST00000628597 123 ntBASIC2.56□□□□□ -2
AP4B1Q9Y6B7 MIR7515-201ENST00000637837 67 ntBASIC2.56□□□□□ -2
AP4B1Q9Y6B7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
AP4B1Q9Y6B7 AL365361.1-201ENST00000566942 3481 ntBASIC2.56□□□□□ -2
AP4B1Q9Y6B7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
AP4B1Q9Y6B7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.55□□□□□ -2
AP4B1Q9Y6B7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.55□□□□□ -2
AP4B1Q9Y6B7 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.55□□□□□ -2
AP4B1Q9Y6B7 Y_RNA.46-201ENST00000362695 102 ntBASIC2.55□□□□□ -2
AP4B1Q9Y6B7 Y_RNA.111-201ENST00000363248 100 ntBASIC2.55□□□□□ -2
AP4B1Q9Y6B7 U3.26-201ENST00000391236 204 ntBASIC2.55□□□□□ -2
AP4B1Q9Y6B7 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.55□□□□□ -2
AP4B1Q9Y6B7 FCF1P1-201ENST00000432690 571 ntBASIC2.55□□□□□ -2
AP4B1Q9Y6B7 TIMM9P1-201ENST00000436122 256 ntBASIC2.55□□□□□ -2
AP4B1Q9Y6B7 CR769767.1-201ENST00000436337 346 ntBASIC2.55□□□□□ -2
AP4B1Q9Y6B7 SNRPEP9-201ENST00000436794 238 ntBASIC2.55□□□□□ -2
AP4B1Q9Y6B7 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.55□□□□□ -2
AP4B1Q9Y6B7 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.55□□□□□ -2
AP4B1Q9Y6B7 AC009961.3-201ENST00000449832 765 ntBASIC2.55□□□□□ -2
AP4B1Q9Y6B7 RPL36AP51-201ENST00000487216 318 ntBASIC2.55□□□□□ -2
AP4B1Q9Y6B7 AC116347.2-201ENST00000514912 523 ntBASIC2.55□□□□□ -2
AP4B1Q9Y6B7 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.55□□□□□ -2
AP4B1Q9Y6B7 AP000889.1-201ENST00000530968 660 ntBASIC2.55□□□□□ -2
AP4B1Q9Y6B7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.55□□□□□ -2
AP4B1Q9Y6B7 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.55□□□□□ -2
AP4B1Q9Y6B7 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.55□□□□□ -2
AP4B1Q9Y6B7 AL356432.3-201ENST00000568952 465 ntBASIC2.55□□□□□ -2
AP4B1Q9Y6B7 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.55□□□□□ -2
AP4B1Q9Y6B7 AC004805.2-201ENST00000605382 482 ntBASIC2.55□□□□□ -2
AP4B1Q9Y6B7 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.55□□□□□ -2
AP4B1Q9Y6B7 MIR7106-201ENST00000612419 65 ntBASIC2.55□□□□□ -2
AP4B1Q9Y6B7 AC090970.3-201ENST00000612566 866 ntBASIC2.55□□□□□ -2
AP4B1Q9Y6B7 AC006386.2-201ENST00000624491 75 ntBASIC2.55□□□□□ -2
AP4B1Q9Y6B7 AC012005.1-201ENST00000624575 75 ntBASIC2.55□□□□□ -2
AP4B1Q9Y6B7 AC007671.2-201ENST00000637344 619 ntBASIC2.55□□□□□ -2
AP4B1Q9Y6B7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
AP4B1Q9Y6B7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.54□□□□□ -2
AP4B1Q9Y6B7 AC104454.1-201ENST00000421341 1401 ntBASIC2.54□□□□□ -2
AP4B1Q9Y6B7 Y_RNA.97-201ENST00000363094 102 ntBASIC2.54□□□□□ -2
AP4B1Q9Y6B7 RNU6-1167P-201ENST00000363227 94 ntBASIC2.54□□□□□ -2
AP4B1Q9Y6B7 RNU6-1284P-201ENST00000363701 100 ntBASIC2.54□□□□□ -2
AP4B1Q9Y6B7 SNORA80A-201ENST00000363922 136 ntBASIC2.54□□□□□ -2
AP4B1Q9Y6B7 RNA5SP210-201ENST00000391034 120 ntBASIC2.54□□□□□ -2
AP4B1Q9Y6B7 AL139397.2-201ENST00000404529 772 ntBASIC2.54□□□□□ -2
AP4B1Q9Y6B7 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.54□□□□□ -2
AP4B1Q9Y6B7 RPS27AP14-201ENST00000422868 454 ntBASIC2.54□□□□□ -2
AP4B1Q9Y6B7 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.54□□□□□ -2
AP4B1Q9Y6B7 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.54□□□□□ -2
AP4B1Q9Y6B7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.54□□□□□ -2
AP4B1Q9Y6B7 ELOCP14-201ENST00000428070 331 ntBASIC2.54□□□□□ -2
AP4B1Q9Y6B7 SUMO1P4-201ENST00000429430 302 ntBASIC2.54□□□□□ -2
AP4B1Q9Y6B7 AC087499.2-201ENST00000432861 149 ntBASIC2.54□□□□□ -2
AP4B1Q9Y6B7 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.54□□□□□ -2
AP4B1Q9Y6B7 MTND1P28-201ENST00000435623 950 ntBASIC2.54□□□□□ -2
AP4B1Q9Y6B7 AL008629.1-201ENST00000438615 184 ntBASIC2.54□□□□□ -2
AP4B1Q9Y6B7 ELOCP7-201ENST00000439968 331 ntBASIC2.54□□□□□ -2
AP4B1Q9Y6B7 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.54□□□□□ -2
AP4B1Q9Y6B7 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.54□□□□□ -2
AP4B1Q9Y6B7 CECR9-201ENST00000453421 199 ntBASIC2.54□□□□□ -2
AP4B1Q9Y6B7 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.54□□□□□ -2
AP4B1Q9Y6B7 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.54□□□□□ -2
AP4B1Q9Y6B7 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
AP4B1Q9Y6B7 LINC00888-204ENST00000487386 421 ntBASIC2.54□□□□□ -2
AP4B1Q9Y6B7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.54□□□□□ -2
AP4B1Q9Y6B7 AC091826.1-201ENST00000514065 313 ntBASIC2.54□□□□□ -2
AP4B1Q9Y6B7 AC109329.2-201ENST00000519658 482 ntBASIC2.54□□□□□ -2
AP4B1Q9Y6B7 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.54□□□□□ -2
AP4B1Q9Y6B7 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.54□□□□□ -2
AP4B1Q9Y6B7 AC106782.4-201ENST00000568264 210 ntBASIC2.54□□□□□ -2
AP4B1Q9Y6B7 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.54□□□□□ -2
AP4B1Q9Y6B7 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
AP4B1Q9Y6B7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.54□□□□□ -2
AP4B1Q9Y6B7 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.53□□□□□ -2
AP4B1Q9Y6B7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
AP4B1Q9Y6B7 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.53□□□□□ -2
AP4B1Q9Y6B7 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.53□□□□□ -2
AP4B1Q9Y6B7 AC010099.3-201ENST00000423896 409 ntBASIC2.53□□□□□ -2
AP4B1Q9Y6B7 RPL37P21-201ENST00000435890 276 ntBASIC2.53□□□□□ -2
AP4B1Q9Y6B7 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms