Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 RNU5E-8P-201ENST00000363502 116 ntBASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 RNY4P14-201ENST00000363656 96 ntBASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 RNU1-39P-201ENST00000383897 165 ntBASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 RNU6-39P-201ENST00000384344 107 ntBASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 AL590002.1-201ENST00000406554 418 ntBASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 RNU6-516P-201ENST00000411381 104 ntBASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 SSXP9-201ENST00000417503 292 ntBASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 DPPA2P1-201ENST00000428060 556 ntBASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 AC119618.1-201ENST00000434191 222 ntBASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 MTND2P24-201ENST00000453434 806 ntBASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 RPL23AP31-201ENST00000456160 467 ntBASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 AC108059.3-201ENST00000456388 214 ntBASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 AC023194.1-201ENST00000493084 308 ntBASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 RNU6-1178P-201ENST00000516674 107 ntBASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 AP003034.1-201ENST00000534621 422 ntBASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 HMGB1P33-201ENST00000563485 527 ntBASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 AP001330.5-201ENST00000607176 411 ntBASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 TUG1_1.1-201ENST00000610654 145 ntBASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 MIR6130-201ENST00000619419 109 ntBASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SNX9Q9Y5X1 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 Y_RNA.9-201ENST00000362354 101 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 Y_RNA.22-201ENST00000362492 102 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 RNU4-12P-201ENST00000365233 139 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 RNU6-108P-201ENST00000365558 107 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 RNU6-74P-201ENST00000384235 107 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 SNORA7.4-201ENST00000384249 137 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 RPS4XP8-201ENST00000402039 771 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 RNU6-1077P-201ENST00000410506 102 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 ELOCP4-201ENST00000420090 333 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 MTND1P2-201ENST00000430604 821 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AC000111.3-201ENST00000433478 193 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AC090774.1-201ENST00000435925 246 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AC005094.1-201ENST00000440420 368 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AL671855.1-201ENST00000446875 1203 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AC016696.1-201ENST00000446949 318 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AC108860.1-201ENST00000484521 383 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 KLHL2P1-201ENST00000508691 521 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AC010493.1-201ENST00000513479 292 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 SNORA74D-201ENST00000516404 141 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 SNORD59.2-201ENST00000516873 68 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 RNU6-64P-201ENST00000517119 105 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 RNU6-711P-201ENST00000517255 106 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AC103783.1-201ENST00000520506 373 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 SUB1P2-201ENST00000556401 297 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AL133241.1-201ENST00000556832 487 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 GLUD1P4-201ENST00000590914 418 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 BDH2P1-201ENST00000602288 736 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AC025449.1-201ENST00000603896 529 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AP001330.4-201ENST00000604350 154 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AP001596.2-201ENST00000608410 312 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AL450472.3-201ENST00000615578 367 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AC002076.2-201ENST00000617362 122 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AC091953.5-201ENST00000622919 233 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AC099506.2-201ENST00000623074 221 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AC009161.2-201ENST00000624626 138 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AC019226.1-201ENST00000625666 515 ntBASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.37□□□□□ -1.87
SNX9Q9Y5X1 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 RNU6-1090P-201ENST00000364065 94 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms