Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 AL133547.1-201ENST00000448546 220 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 RPL12P25-201ENST00000455592 494 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 RNU7-180P-201ENST00000459240 63 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 AC104136.1-201ENST00000512969 394 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 SNORA31.1-201ENST00000515993 133 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 SNORA31.5-201ENST00000516190 133 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 RNU6-1178P-201ENST00000516674 107 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 PSMA2P1-201ENST00000526365 646 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 MIR4424-201ENST00000585257 86 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 AP000907.4-201ENST00000604143 237 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 SNORD39.4-201ENST00000620099 78 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 AC010338.1-201ENST00000621823 717 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 PLCE1P1-201ENST00000622094 305 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 AL357559.1-201ENST00000622228 274 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 AC024940.5-201ENST00000622889 474 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 AC012442.3-202ENST00000636742 206 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 HSPA8P4-201ENST00000511877 1920 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 AC005183.1-201ENST00000603687 1979 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 MIR208A-201ENST00000362287 71 ntBASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 RNA5SP399-201ENST00000364003 117 ntBASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 Y_RNA.295-201ENST00000364918 102 ntBASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 RNU6-877P-201ENST00000383868 107 ntBASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 RNU6-1068P-201ENST00000410958 103 ntBASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 RNU6-193P-201ENST00000410977 107 ntBASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 MRPS10P2-201ENST00000431226 381 ntBASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 AL445584.1-201ENST00000431451 330 ntBASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 AL139415.2-201ENST00000431968 163 ntBASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 CALM1P1-201ENST00000442082 433 ntBASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 RPL21P41-201ENST00000459863 264 ntBASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 MTCO3P38-201ENST00000468910 766 ntBASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 RPL23AP11-201ENST00000475260 469 ntBASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 SUMO2P20-201ENST00000520803 283 ntBASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 AL157871.3-201ENST00000557231 293 ntBASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 AC092325.1-201ENST00000566449 554 ntBASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 MIR3944-201ENST00000581277 108 ntBASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 RBM11P1-201ENST00000604951 799 ntBASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 BRDTP1-201ENST00000605735 677 ntBASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 AL391261.4-201ENST00000616012 481 ntBASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 RPS4XP5-202ENST00000449995 1334 ntBASIC3.09□□□□□ -1.91
LSM4Q9Y4Z0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
LSM4Q9Y4Z0 HSPA8P1-201ENST00000425843 1833 ntBASIC3.09□□□□□ -1.92
LSM4Q9Y4Z0 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.09□□□□□ -1.92
LSM4Q9Y4Z0 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
LSM4Q9Y4Z0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
LSM4Q9Y4Z0 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
LSM4Q9Y4Z0 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 Y_RNA.33-201ENST00000362591 102 ntBASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 RNU6-451P-201ENST00000362921 107 ntBASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 RNU6-395P-201ENST00000365662 106 ntBASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 MIR888-201ENST00000401186 77 ntBASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 SNORA11.1-201ENST00000408133 129 ntBASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 RN7SKP285-201ENST00000410137 318 ntBASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 EEF1A1P40-201ENST00000412883 573 ntBASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 AC099548.1-201ENST00000421443 426 ntBASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 RPL23AP82-202ENST00000427528 469 ntBASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 GOT2P5-201ENST00000433995 546 ntBASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 AC008264.1-201ENST00000447612 367 ntBASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms