Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.74□□□□□ -1.97
SMC3Q9UQE7 DPPA3P1-201ENST00000448050 469 ntBASIC2.74□□□□□ -1.97
SMC3Q9UQE7 MTCO1P27-201ENST00000448269 226 ntBASIC2.74□□□□□ -1.97
SMC3Q9UQE7 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.74□□□□□ -1.97
SMC3Q9UQE7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.74□□□□□ -1.97
SMC3Q9UQE7 RNA5SP356-201ENST00000515972 94 ntBASIC2.74□□□□□ -1.97
SMC3Q9UQE7 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.74□□□□□ -1.97
SMC3Q9UQE7 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.74□□□□□ -1.97
SMC3Q9UQE7 AC087465.1-201ENST00000560574 245 ntBASIC2.74□□□□□ -1.97
SMC3Q9UQE7 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.74□□□□□ -1.97
SMC3Q9UQE7 LARP7P3-201ENST00000579888 337 ntBASIC2.74□□□□□ -1.97
SMC3Q9UQE7 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.74□□□□□ -1.97
SMC3Q9UQE7 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.74□□□□□ -1.97
SMC3Q9UQE7 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.74□□□□□ -1.97
SMC3Q9UQE7 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.74□□□□□ -1.97
SMC3Q9UQE7 AL355877.2-201ENST00000603670 358 ntBASIC2.74□□□□□ -1.97
SMC3Q9UQE7 MIR6817-201ENST00000615588 66 ntBASIC2.74□□□□□ -1.97
SMC3Q9UQE7 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.74□□□□□ -1.97
SMC3Q9UQE7 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.74□□□□□ -1.97
SMC3Q9UQE7 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.74□□□□□ -1.97
SMC3Q9UQE7 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.74□□□□□ -1.97
SMC3Q9UQE7 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.74□□□□□ -1.97
SMC3Q9UQE7 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.74□□□□□ -1.97
SMC3Q9UQE7 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.74□□□□□ -1.97
SMC3Q9UQE7 FAM133CP-201ENST00000332869 704 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 SNORA80A-201ENST00000363922 136 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 RNU6-754P-201ENST00000391166 107 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 MTCO1P17-201ENST00000411522 491 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 NUP35P1-201ENST00000422734 947 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.73□□□□□ -1.97
SMC3Q9UQE7 RPL35AP22-201ENST00000436855 335 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.73□□□□□ -1.97
SMC3Q9UQE7 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SMC3Q9UQE7 IFNA11P-201ENST00000446352 526 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.73□□□□□ -1.97
SMC3Q9UQE7 AL109933.2-201ENST00000452651 260 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 ATG12P2-201ENST00000456830 416 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 RN7SL432P-201ENST00000484057 298 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 AC034222.1-201ENST00000494052 532 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.73□□□□□ -1.97
SMC3Q9UQE7 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.73□□□□□ -1.97
SMC3Q9UQE7 AC114786.4-201ENST00000508771 728 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 LTV1P1-201ENST00000510683 1237 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.73□□□□□ -1.97
SMC3Q9UQE7 AC114797.1-201ENST00000514003 728 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.73□□□□□ -1.97
SMC3Q9UQE7 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 RNA5SP148-201ENST00000516527 94 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 Y_RNA.717-201ENST00000517106 92 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 NRON-201ENST00000517270 370 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 RNU6-840P-201ENST00000517275 65 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 AC022634.1-201ENST00000520765 532 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.73□□□□□ -1.97
SMC3Q9UQE7 AC021269.2-201ENST00000532318 330 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 LRRC34P1-201ENST00000542742 915 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 EIF4BP1-201ENST00000554881 351 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 AC105137.2-201ENST00000569073 466 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 AC005951.2-201ENST00000576282 495 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 AC007336.1-201ENST00000576365 3828 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.73□□□□□ -1.97
SMC3Q9UQE7 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.73□□□□□ -1.97
SMC3Q9UQE7 HMGN2P15-201ENST00000585707 270 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.73□□□□□ -1.97
SMC3Q9UQE7 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.73□□□□□ -1.97
SMC3Q9UQE7 AL391001.1-201ENST00000602747 715 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 AL031281.1-201ENST00000604049 488 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 AC103810.6-201ENST00000606708 136 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.73□□□□□ -1.97
SMC3Q9UQE7 AP000676.3-201ENST00000623299 569 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 AC068787.1-201ENST00000623908 691 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 AL356596.1-201ENST00000624230 379 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 AC019226.1-201ENST00000625666 515 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 AC092192.1-201ENST00000633154 1018 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 MTND1P37-201ENST00000636562 264 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
SMC3Q9UQE7 CCT4P2-201ENST00000233836 1548 ntBASIC2.73□□□□□ -1.97
SMC3Q9UQE7 SNORD113-6-201ENST00000363345 75 ntBASIC2.72□□□□□ -1.97
SMC3Q9UQE7 RNU6-853P-201ENST00000364306 107 ntBASIC2.72□□□□□ -1.97
SMC3Q9UQE7 SNORA23-201ENST00000365128 182 ntBASIC2.72□□□□□ -1.97
SMC3Q9UQE7 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
SMC3Q9UQE7 OR5H15-201ENST00000383696 930 ntBASIC2.72□□□□□ -1.97
SMC3Q9UQE7 MTND1P23-201ENST00000416931 372 ntBASIC2.72□□□□□ -1.97
SMC3Q9UQE7 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.72□□□□□ -1.97
SMC3Q9UQE7 AL445669.1-201ENST00000426743 755 ntBASIC2.72□□□□□ -1.97
SMC3Q9UQE7 RPS15AP28-201ENST00000435088 386 ntBASIC2.72□□□□□ -1.97
SMC3Q9UQE7 RPS20P22-201ENST00000473700 357 ntBASIC2.72□□□□□ -1.97
SMC3Q9UQE7 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.72□□□□□ -1.97
SMC3Q9UQE7 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.72□□□□□ -1.97
SMC3Q9UQE7 AC093809.1-201ENST00000509155 340 ntBASIC2.72□□□□□ -1.97
SMC3Q9UQE7 RN7SKP287-201ENST00000516546 266 ntBASIC2.72□□□□□ -1.97
SMC3Q9UQE7 AP000889.2-201ENST00000532684 490 ntBASIC2.72□□□□□ -1.97
SMC3Q9UQE7 MTND3P12-201ENST00000559068 328 ntBASIC2.72□□□□□ -1.97
SMC3Q9UQE7 RPS3AP23-202ENST00000574601 686 ntBASIC2.72□□□□□ -1.97
SMC3Q9UQE7 AC093424.1-201ENST00000604999 338 ntBASIC2.72□□□□□ -1.97
SMC3Q9UQE7 Z99289.3-201ENST00000605586 594 ntBASIC2.72□□□□□ -1.97
SMC3Q9UQE7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SMC3Q9UQE7 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.72□□□□□ -1.97
SMC3Q9UQE7 AC025594.3-201ENST00000613068 790 ntBASIC2.72□□□□□ -1.97
SMC3Q9UQE7 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms