Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 RN7SL176P-201ENST00000580352 264 ntBASIC4.81□□□□□ -1.64
PCDHA4Q9UN74 BDH2P1-201ENST00000602288 736 ntBASIC4.81□□□□□ -1.64
PCDHA4Q9UN74 ARF4P1-201ENST00000605447 541 ntBASIC4.81□□□□□ -1.64
PCDHA4Q9UN74 MIR432-201ENST00000606207 94 ntBASIC4.81□□□□□ -1.64
PCDHA4Q9UN74 SNORD58B-201ENST00000607313 66 ntBASIC4.81□□□□□ -1.64
PCDHA4Q9UN74 AC100812.1-201ENST00000607622 580 ntBASIC4.81□□□□□ -1.64
PCDHA4Q9UN74 AC064801.1-201ENST00000612025 407 ntBASIC4.81□□□□□ -1.64
PCDHA4Q9UN74 MIR6758-201ENST00000620653 63 ntBASIC4.81□□□□□ -1.64
PCDHA4Q9UN74 AL353748.2-201ENST00000622148 471 ntBASIC4.81□□□□□ -1.64
PCDHA4Q9UN74 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHA4Q9UN74 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHA4Q9UN74 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
PCDHA4Q9UN74 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
PCDHA4Q9UN74 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHA4Q9UN74 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
PCDHA4Q9UN74 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 RNU6-450P-201ENST00000364654 107 ntBASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 RHOT1P2-201ENST00000366423 333 ntBASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 SYF2P2-201ENST00000417620 583 ntBASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 Z98949.2-201ENST00000440996 144 ntBASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 AC112492.4-201ENST00000456549 352 ntBASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 RNA5SP246-201ENST00000458909 119 ntBASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 AF213884.1-201ENST00000488102 463 ntBASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 MTND3P25-201ENST00000509243 135 ntBASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 Y_RNA.668-201ENST00000516233 93 ntBASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 AC087369.1-201ENST00000520775 996 ntBASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 HIGD1AP5-201ENST00000529959 259 ntBASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 SNRPGP16-201ENST00000533275 226 ntBASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 MIR3939-201ENST00000582614 106 ntBASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 RNU6-85P-201ENST00000605989 107 ntBASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 AC107871.2-201ENST00000612894 502 ntBASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 MIR8059-201ENST00000620427 81 ntBASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 AL023881.1-201ENST00000621088 301 ntBASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 AL031601.2-202ENST00000622650 282 ntBASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHA4Q9UN74 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 ZNF285B-201ENST00000561698 1767 ntBASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 Y_RNA.39-201ENST00000362620 98 ntBASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 Y_RNA.534-201ENST00000384599 112 ntBASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 MIR578-201ENST00000384828 96 ntBASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 HMGB1P9-201ENST00000429856 646 ntBASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 RPL23AP46-201ENST00000438548 490 ntBASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 NUTF2P3-201ENST00000448540 384 ntBASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 RPS23P7-201ENST00000466210 444 ntBASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 AC010618.1-201ENST00000469924 477 ntBASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 AC006499.6-201ENST00000511169 607 ntBASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 GMPSP1-201ENST00000514075 579 ntBASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 AC109446.1-201ENST00000566172 220 ntBASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 AC022655.2-201ENST00000577280 318 ntBASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 LRRC37A5P-203ENST00000580181 585 ntBASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 AL355297.3-201ENST00000604082 446 ntBASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 AC005344.1-201ENST00000613391 459 ntBASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 MIR7702-201ENST00000621931 59 ntBASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDHA4Q9UN74 NEAT1-202ENST00000501122 22743 ntBASIC4.78□□□□□ -1.64
PCDHA4Q9UN74 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHA4Q9UN74 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHA4Q9UN74 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.78□□□□□ -1.64
PCDHA4Q9UN74 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHA4Q9UN74 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
PCDHA4Q9UN74 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PCDHA4Q9UN74 RNU6-379P-201ENST00000363813 104 ntBASIC4.78□□□□□ -1.64
PCDHA4Q9UN74 Y_RNA.380-201ENST00000365663 111 ntBASIC4.78□□□□□ -1.64
PCDHA4Q9UN74 SNORA36C-201ENST00000384289 132 ntBASIC4.78□□□□□ -1.64
PCDHA4Q9UN74 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PCDHA4Q9UN74 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHA4Q9UN74 AL158071.1-201ENST00000430315 461 ntBASIC4.78□□□□□ -1.64
PCDHA4Q9UN74 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHA4Q9UN74 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHA4Q9UN74 AL353752.1-201ENST00000454946 260 ntBASIC4.78□□□□□ -1.64
PCDHA4Q9UN74 RPL9P32-201ENST00000464118 620 ntBASIC4.78□□□□□ -1.64
PCDHA4Q9UN74 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHA4Q9UN74 RN7SKP122-201ENST00000515923 296 ntBASIC4.78□□□□□ -1.64
PCDHA4Q9UN74 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms