Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 SNRPGP3-201ENST00000469405 227 ntBASIC3.63□□□□□ -1.83
VPS4AQ9UN37 AC084198.1-201ENST00000477747 402 ntBASIC3.63□□□□□ -1.83
VPS4AQ9UN37 VN1R104P-201ENST00000505115 1009 ntBASIC3.63□□□□□ -1.83
VPS4AQ9UN37 AC018710.1-201ENST00000506509 158 ntBASIC3.63□□□□□ -1.83
VPS4AQ9UN37 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.63□□□□□ -1.83
VPS4AQ9UN37 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.63□□□□□ -1.83
VPS4AQ9UN37 RN7SKP83-201ENST00000516512 178 ntBASIC3.63□□□□□ -1.83
VPS4AQ9UN37 RNU6-685P-201ENST00000517088 95 ntBASIC3.63□□□□□ -1.83
VPS4AQ9UN37 OR5AL2P-201ENST00000532185 920 ntBASIC3.63□□□□□ -1.83
VPS4AQ9UN37 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS4AQ9UN37 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS4AQ9UN37 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.63□□□□□ -1.83
VPS4AQ9UN37 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS4AQ9UN37 AC015917.1-201ENST00000579654 510 ntBASIC3.63□□□□□ -1.83
VPS4AQ9UN37 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.63□□□□□ -1.83
VPS4AQ9UN37 AC011471.1-201ENST00000585766 187 ntBASIC3.63□□□□□ -1.83
VPS4AQ9UN37 BNIP3P9-201ENST00000603714 553 ntBASIC3.63□□□□□ -1.83
VPS4AQ9UN37 AL137849.1-201ENST00000604767 169 ntBASIC3.63□□□□□ -1.83
VPS4AQ9UN37 AL365204.3-201ENST00000612448 685 ntBASIC3.63□□□□□ -1.83
VPS4AQ9UN37 AL442067.2-201ENST00000614033 363 ntBASIC3.63□□□□□ -1.83
VPS4AQ9UN37 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.63□□□□□ -1.83
VPS4AQ9UN37 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
VPS4AQ9UN37 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS4AQ9UN37 CEP170P1-201ENST00000502249 4587 ntBASIC3.63□□□□□ -1.83
VPS4AQ9UN37 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS4AQ9UN37 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
VPS4AQ9UN37 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS4AQ9UN37 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
VPS4AQ9UN37 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.62□□□□□ -1.83
VPS4AQ9UN37 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS4AQ9UN37 RNU6-552P-201ENST00000362869 119 ntBASIC3.62□□□□□ -1.83
VPS4AQ9UN37 RNU6-701P-201ENST00000384059 107 ntBASIC3.62□□□□□ -1.83
VPS4AQ9UN37 MIR183-201ENST00000384958 110 ntBASIC3.62□□□□□ -1.83
VPS4AQ9UN37 RNU6-876P-201ENST00000391295 104 ntBASIC3.62□□□□□ -1.83
VPS4AQ9UN37 EI24P2-201ENST00000397776 1076 ntBASIC3.62□□□□□ -1.83
VPS4AQ9UN37 RNU6-387P-201ENST00000411331 105 ntBASIC3.62□□□□□ -1.83
VPS4AQ9UN37 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS4AQ9UN37 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS4AQ9UN37 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.62□□□□□ -1.83
VPS4AQ9UN37 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.62□□□□□ -1.83
VPS4AQ9UN37 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS4AQ9UN37 MLLT10P2-201ENST00000506434 249 ntBASIC3.62□□□□□ -1.83
VPS4AQ9UN37 AC117522.3-201ENST00000507974 584 ntBASIC3.62□□□□□ -1.83
VPS4AQ9UN37 RNA5SP208-201ENST00000516156 78 ntBASIC3.62□□□□□ -1.83
VPS4AQ9UN37 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS4AQ9UN37 AL121576.1-201ENST00000556055 276 ntBASIC3.62□□□□□ -1.83
VPS4AQ9UN37 MED28P6-201ENST00000558776 231 ntBASIC3.62□□□□□ -1.83
VPS4AQ9UN37 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS4AQ9UN37 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS4AQ9UN37 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS4AQ9UN37 AC008521.1-201ENST00000587471 187 ntBASIC3.62□□□□□ -1.83
VPS4AQ9UN37 BDH2P1-201ENST00000602288 736 ntBASIC3.62□□□□□ -1.83
VPS4AQ9UN37 AC008945.2-201ENST00000606056 604 ntBASIC3.62□□□□□ -1.83
VPS4AQ9UN37 AL357078.3-201ENST00000607528 618 ntBASIC3.62□□□□□ -1.83
VPS4AQ9UN37 SCARNA15.3-201ENST00000626315 122 ntBASIC3.62□□□□□ -1.83
VPS4AQ9UN37 SCARNA4.1-201ENST00000628597 123 ntBASIC3.62□□□□□ -1.83
VPS4AQ9UN37 U6.98-201ENST00000637157 84 ntBASIC3.62□□□□□ -1.83
VPS4AQ9UN37 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS4AQ9UN37 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS4AQ9UN37 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS4AQ9UN37 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
VPS4AQ9UN37 AC073073.2-201ENST00000609827 2578 ntBASIC3.61□□□□□ -1.83
VPS4AQ9UN37 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS4AQ9UN37 API5P2-201ENST00000397055 1498 ntBASIC3.61□□□□□ -1.83
VPS4AQ9UN37 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
VPS4AQ9UN37 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS4AQ9UN37 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS4AQ9UN37 Y_RNA.160-201ENST00000363677 92 ntBASIC3.61□□□□□ -1.83
VPS4AQ9UN37 RNU6-173P-201ENST00000364215 104 ntBASIC3.61□□□□□ -1.83
VPS4AQ9UN37 RNU6-1181P-201ENST00000384191 106 ntBASIC3.61□□□□□ -1.83
VPS4AQ9UN37 Y_RNA.576-201ENST00000384781 102 ntBASIC3.61□□□□□ -1.83
VPS4AQ9UN37 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS4AQ9UN37 AL035423.1-201ENST00000420331 213 ntBASIC3.61□□□□□ -1.83
VPS4AQ9UN37 AL451054.2-201ENST00000420896 202 ntBASIC3.61□□□□□ -1.83
VPS4AQ9UN37 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS4AQ9UN37 CYCSP32-201ENST00000440548 321 ntBASIC3.61□□□□□ -1.83
VPS4AQ9UN37 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS4AQ9UN37 RNU7-180P-201ENST00000459240 63 ntBASIC3.61□□□□□ -1.83
VPS4AQ9UN37 AP000852.1-201ENST00000472460 573 ntBASIC3.61□□□□□ -1.83
VPS4AQ9UN37 RPL23AP11-201ENST00000475260 469 ntBASIC3.61□□□□□ -1.83
VPS4AQ9UN37 RN7SL293P-201ENST00000481765 281 ntBASIC3.61□□□□□ -1.83
VPS4AQ9UN37 AC108860.1-201ENST00000484521 383 ntBASIC3.61□□□□□ -1.83
VPS4AQ9UN37 EIF4EP3-201ENST00000498782 656 ntBASIC3.61□□□□□ -1.83
VPS4AQ9UN37 HMGN1P12-201ENST00000499125 195 ntBASIC3.61□□□□□ -1.83
VPS4AQ9UN37 AC004062.1-201ENST00000509926 645 ntBASIC3.61□□□□□ -1.83
VPS4AQ9UN37 RNU6-352P-201ENST00000516908 107 ntBASIC3.61□□□□□ -1.83
VPS4AQ9UN37 RNA5SP503-201ENST00000517047 117 ntBASIC3.61□□□□□ -1.83
VPS4AQ9UN37 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS4AQ9UN37 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS4AQ9UN37 CENPUP1-201ENST00000526649 1202 ntBASIC3.61□□□□□ -1.83
VPS4AQ9UN37 SNRPGP16-201ENST00000533275 226 ntBASIC3.61□□□□□ -1.83
VPS4AQ9UN37 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS4AQ9UN37 AC091135.1-201ENST00000585943 307 ntBASIC3.61□□□□□ -1.83
VPS4AQ9UN37 AC018638.8-201ENST00000588755 281 ntBASIC3.61□□□□□ -1.83
VPS4AQ9UN37 AC010525.2-201ENST00000590920 195 ntBASIC3.61□□□□□ -1.83
VPS4AQ9UN37 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS4AQ9UN37 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS4AQ9UN37 BNIP3P10-201ENST00000605360 577 ntBASIC3.61□□□□□ -1.83
VPS4AQ9UN37 AC007619.2-201ENST00000605743 379 ntBASIC3.61□□□□□ -1.83
VPS4AQ9UN37 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms