Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
CDC42EP3Q9UKI2 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.9□□□□□ -1.78
CDC42EP3Q9UKI2 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CDC42EP3Q9UKI2 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CDC42EP3Q9UKI2 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 RNU6-512P-201ENST00000364438 103 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 SNORD73A-201ENST00000386062 65 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 Z98745.1-201ENST00000402553 494 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 MIR1302-3-201ENST00000408128 138 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 AL030996.1-201ENST00000411430 235 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 CKS1BP6-201ENST00000424932 240 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 RPEP3-201ENST00000425462 676 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 AL158071.1-201ENST00000430315 461 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 AC099799.1-201ENST00000439809 192 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 PCMTD1P1-201ENST00000455560 355 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 DHFRP3-201ENST00000455595 559 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 HMGB3P30-201ENST00000457863 606 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 SNORD108-201ENST00000459332 71 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 RPS23P3-201ENST00000470993 430 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 AC011005.2-201ENST00000487324 359 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 HMGB1P30-201ENST00000492455 606 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 RNU1-86P-201ENST00000516108 154 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 SCARNA15.2-201ENST00000516409 127 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 RNU1-107P-201ENST00000516617 154 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 RNU4-77P-201ENST00000516692 156 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 RNU6-794P-201ENST00000517261 64 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 AC104576.1-201ENST00000524225 88 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 AC084851.1-201ENST00000529105 249 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 TRAV37-201ENST00000553906 342 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 AL157871.3-201ENST00000557231 293 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 CYCSP40-201ENST00000575927 294 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 ZYXP1-201ENST00000617638 118 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 AL360181.4-201ENST00000621752 134 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 AL512643.1-201ENST00000635735 524 ntBASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CDC42EP3Q9UKI2 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 ZNF137P-201ENST00000456718 1920 ntBASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 SNORA73.1-201ENST00000363107 205 ntBASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 RNU6-505P-201ENST00000384427 107 ntBASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 MIR708-201ENST00000390708 88 ntBASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 RNA5SP372-201ENST00000390836 115 ntBASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 RPS26P8-201ENST00000393490 348 ntBASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 RNU2-23P-201ENST00000410545 195 ntBASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 AC091390.3-201ENST00000426478 338 ntBASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 AC011998.1-201ENST00000433403 117 ntBASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 DAP3P1-201ENST00000441522 278 ntBASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 RPS24P6-201ENST00000452670 400 ntBASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 SNORA84-201ENST00000459229 133 ntBASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 U8.20-201ENST00000459445 131 ntBASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 RN7SL303P-201ENST00000469773 251 ntBASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 MLLT10P2-201ENST00000506434 249 ntBASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 VWA8P1-201ENST00000510889 176 ntBASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 RNU6-143P-201ENST00000516942 93 ntBASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 RNU6-264P-201ENST00000517134 104 ntBASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 Y_RNA.721-201ENST00000517207 102 ntBASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 AL161670.1-201ENST00000554348 137 ntBASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 RPL21P7-201ENST00000557463 483 ntBASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 AC110588.1-201ENST00000559699 137 ntBASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 AC109446.1-201ENST00000566172 220 ntBASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 CPDP1-201ENST00000579660 283 ntBASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 SNORD58B-201ENST00000607313 66 ntBASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC3.89□□□□□ -1.79
CDC42EP3Q9UKI2 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms