Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC093752.1-206ENST00000511823 336 ntBASIC2.62□□□□□ -1.99
CTNNA3Q9UI47 RNU6-583P-201ENST00000516012 92 ntBASIC2.62□□□□□ -1.99
CTNNA3Q9UI47 HSPE1P18-201ENST00000517602 280 ntBASIC2.62□□□□□ -1.99
CTNNA3Q9UI47 RPS3AP23-202ENST00000574601 686 ntBASIC2.62□□□□□ -1.99
CTNNA3Q9UI47 MIR5694-201ENST00000581190 76 ntBASIC2.62□□□□□ -1.99
CTNNA3Q9UI47 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.62□□□□□ -1.99
CTNNA3Q9UI47 RPS15AP11-201ENST00000594193 385 ntBASIC2.62□□□□□ -1.99
CTNNA3Q9UI47 AL136981.2-201ENST00000617319 734 ntBASIC2.62□□□□□ -1.99
CTNNA3Q9UI47 MIR6873-201ENST00000622788 63 ntBASIC2.62□□□□□ -1.99
CTNNA3Q9UI47 AC093591.3-201ENST00000634516 308 ntBASIC2.62□□□□□ -1.99
CTNNA3Q9UI47 AC110994.2-201ENST00000635481 492 ntBASIC2.62□□□□□ -1.99
CTNNA3Q9UI47 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.62□□□□□ -1.99
CTNNA3Q9UI47 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CTNNA3Q9UI47 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CTNNA3Q9UI47 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.62□□□□□ -1.99
CTNNA3Q9UI47 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 RNU5E-10P-201ENST00000363506 118 ntBASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 RNU6-1083P-201ENST00000384022 107 ntBASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 RNU6-750P-201ENST00000390946 107 ntBASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 RNU6-1328P-201ENST00000410938 106 ntBASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 AC068533.2-201ENST00000411872 306 ntBASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 TPMTP2-201ENST00000414372 726 ntBASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 AL161449.1-201ENST00000414531 1199 ntBASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 RPL12P25-201ENST00000455592 494 ntBASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 AC097493.1-201ENST00000463958 372 ntBASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 AC104435.1-201ENST00000483483 166 ntBASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 RNA5SP458-201ENST00000516188 119 ntBASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 AC009127.3-201ENST00000570531 403 ntBASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 AC025588.2-201ENST00000604851 466 ntBASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 AL445264.1-201ENST00000621719 171 ntBASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 MTND1P37-201ENST00000636562 264 ntBASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CTNNA3Q9UI47 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
CTNNA3Q9UI47 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CTNNA3Q9UI47 SNORA23-201ENST00000365128 182 ntBASIC2.6□□□□□ -1.99
CTNNA3Q9UI47 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CTNNA3Q9UI47 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.6□□□□□ -1.99
CTNNA3Q9UI47 HMGB1P9-201ENST00000429856 646 ntBASIC2.6□□□□□ -1.99
CTNNA3Q9UI47 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.6□□□□□ -1.99
CTNNA3Q9UI47 SNORD121B-201ENST00000458838 81 ntBASIC2.6□□□□□ -1.99
CTNNA3Q9UI47 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.6□□□□□ -1.99
CTNNA3Q9UI47 GZMAP1-201ENST00000503054 631 ntBASIC2.6□□□□□ -1.99
CTNNA3Q9UI47 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.6□□□□□ -1.99
CTNNA3Q9UI47 SCARNA16.3-201ENST00000516595 184 ntBASIC2.6□□□□□ -1.99
CTNNA3Q9UI47 RNU6-714P-201ENST00000516963 103 ntBASIC2.6□□□□□ -1.99
CTNNA3Q9UI47 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.6□□□□□ -1.99
CTNNA3Q9UI47 BBIP1P1-201ENST00000602999 279 ntBASIC2.6□□□□□ -1.99
CTNNA3Q9UI47 AC004987.4-201ENST00000603383 338 ntBASIC2.6□□□□□ -1.99
CTNNA3Q9UI47 BNIP3P31-201ENST00000604515 566 ntBASIC2.6□□□□□ -1.99
CTNNA3Q9UI47 SNORD14A-201ENST00000606526 91 ntBASIC2.6□□□□□ -1.99
CTNNA3Q9UI47 AL121895.2-201ENST00000619558 447 ntBASIC2.6□□□□□ -1.99
CTNNA3Q9UI47 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CTNNA3Q9UI47 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.6□□□□□ -1.99
CTNNA3Q9UI47 AC092881.1-201ENST00000638218 2733 ntBASIC2.59□□□□□ -1.99
CTNNA3Q9UI47 RNU6-97P-201ENST00000363387 104 ntBASIC2.59□□□□□ -1.99
CTNNA3Q9UI47 RNU6-560P-201ENST00000364007 108 ntBASIC2.59□□□□□ -1.99
CTNNA3Q9UI47 RNU6-621P-201ENST00000364752 109 ntBASIC2.59□□□□□ -1.99
CTNNA3Q9UI47 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.59□□□□□ -1.99
CTNNA3Q9UI47 AC096649.2-201ENST00000416186 393 ntBASIC2.59□□□□□ -1.99
CTNNA3Q9UI47 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.59□□□□□ -1.99
CTNNA3Q9UI47 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.59□□□□□ -1.99
CTNNA3Q9UI47 MTND1P9-201ENST00000453775 944 ntBASIC2.59□□□□□ -1.99
CTNNA3Q9UI47 ATG12P2-201ENST00000456830 416 ntBASIC2.59□□□□□ -1.99
CTNNA3Q9UI47 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.59□□□□□ -1.99
CTNNA3Q9UI47 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.59□□□□□ -1.99
CTNNA3Q9UI47 MIR3199-1-201ENST00000582434 88 ntBASIC2.59□□□□□ -1.99
CTNNA3Q9UI47 AL353997.4-201ENST00000586196 166 ntBASIC2.59□□□□□ -1.99
CTNNA3Q9UI47 BNIP3P26-201ENST00000600827 554 ntBASIC2.59□□□□□ -1.99
CTNNA3Q9UI47 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CTNNA3Q9UI47 MIR203B-201ENST00000636080 86 ntBASIC2.59□□□□□ -1.99
CTNNA3Q9UI47 AC099063.3-201ENST00000642066 185 ntBASIC2.59□□□□□ -1.99
CTNNA3Q9UI47 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
CTNNA3Q9UI47 AL138713.1-201ENST00000624026 2130 ntBASIC2.59□□□□□ -2
CTNNA3Q9UI47 AL390862.1-201ENST00000635467 1469 ntBASIC2.58□□□□□ -2
CTNNA3Q9UI47 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CTNNA3Q9UI47 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CTNNA3Q9UI47 RNA5SP99-201ENST00000364020 114 ntBASIC2.58□□□□□ -2
CTNNA3Q9UI47 RNU1-39P-201ENST00000383897 165 ntBASIC2.58□□□□□ -2
CTNNA3Q9UI47 Y_RNA.548-201ENST00000384656 105 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms