Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 RPL31P35-201ENST00000431058 377 ntBASIC1.9□□□□□ -2.11
RIMBP3Q9UFD9 OR6K5P-201ENST00000447050 945 ntBASIC1.9□□□□□ -2.11
RIMBP3Q9UFD9 RPS23P4-201ENST00000487908 423 ntBASIC1.9□□□□□ -2.11
RIMBP3Q9UFD9 MTCO2P9-201ENST00000503214 694 ntBASIC1.9□□□□□ -2.11
RIMBP3Q9UFD9 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.9□□□□□ -2.11
RIMBP3Q9UFD9 AC093281.2-201ENST00000510153 597 ntBASIC1.9□□□□□ -2.11
RIMBP3Q9UFD9 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
RIMBP3Q9UFD9 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC1.9□□□□□ -2.11
RIMBP3Q9UFD9 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.9□□□□□ -2.11
RIMBP3Q9UFD9 AC087272.1-201ENST00000523624 533 ntBASIC1.9□□□□□ -2.11
RIMBP3Q9UFD9 HSPE1P7-201ENST00000604681 321 ntBASIC1.9□□□□□ -2.11
RIMBP3Q9UFD9 AC090116.1-201ENST00000615679 446 ntBASIC1.9□□□□□ -2.11
RIMBP3Q9UFD9 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.9□□□□□ -2.11
RIMBP3Q9UFD9 AC110079.1-202ENST00000635213 138 ntBASIC1.9□□□□□ -2.11
RIMBP3Q9UFD9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.9□□□□□ -2.11
RIMBP3Q9UFD9 AL354685.2-201ENST00000448218 1447 ntBASIC1.9□□□□□ -2.11
RIMBP3Q9UFD9 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
RIMBP3Q9UFD9 RNU6-1074P-201ENST00000383995 104 ntBASIC1.89□□□□□ -2.11
RIMBP3Q9UFD9 RNU6-1151P-201ENST00000384684 107 ntBASIC1.89□□□□□ -2.11
RIMBP3Q9UFD9 RNU6-821P-201ENST00000390995 107 ntBASIC1.89□□□□□ -2.11
RIMBP3Q9UFD9 RNU1-78P-201ENST00000391248 165 ntBASIC1.89□□□□□ -2.11
RIMBP3Q9UFD9 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.89□□□□□ -2.11
RIMBP3Q9UFD9 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.89□□□□□ -2.11
RIMBP3Q9UFD9 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RIMBP3Q9UFD9 AC083923.1-201ENST00000523708 376 ntBASIC1.89□□□□□ -2.11
RIMBP3Q9UFD9 OR4R1P-201ENST00000529879 463 ntBASIC1.89□□□□□ -2.11
RIMBP3Q9UFD9 AC012254.4-201ENST00000588843 273 ntBASIC1.89□□□□□ -2.11
RIMBP3Q9UFD9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.89□□□□□ -2.11
RIMBP3Q9UFD9 MTND4P12-201ENST00000498999 1377 ntBASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 RNU6-461P-201ENST00000364195 107 ntBASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 Y_RNA.471-201ENST00000384312 102 ntBASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 RNU6-441P-201ENST00000384545 106 ntBASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 AC018630.2-202ENST00000422992 927 ntBASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 MTND2P21-201ENST00000436242 1042 ntBASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 HMGN3P1-201ENST00000453847 193 ntBASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 AC234775.1-201ENST00000454247 670 ntBASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 RNA5SP233-201ENST00000459153 113 ntBASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 RPL23AP41-201ENST00000484754 458 ntBASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 MTND3P24-201ENST00000506306 329 ntBASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 MTCO1P31-201ENST00000506355 492 ntBASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 AC022447.3-201ENST00000506865 495 ntBASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 AC068338.1-201ENST00000565567 176 ntBASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 AC233266.2-201ENST00000567067 528 ntBASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 AC025588.3-201ENST00000604182 274 ntBASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 AC112503.2-201ENST00000609005 552 ntBASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 ZNF519P1-201ENST00000449011 1626 ntBASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 RNU6-730P-201ENST00000383954 104 ntBASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 AL161629.2-201ENST00000615347 275 ntBASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 AC083865.1-201ENST00000636634 831 ntBASIC1.88□□□□□ -2.11
RIMBP3Q9UFD9 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.87□□□□□ -2.11
RIMBP3Q9UFD9 AL513185.3-201ENST00000433335 1300 ntBASIC1.87□□□□□ -2.11
RIMBP3Q9UFD9 RNU6-543P-201ENST00000362576 108 ntBASIC1.87□□□□□ -2.11
RIMBP3Q9UFD9 RAB11AP1-201ENST00000442978 646 ntBASIC1.87□□□□□ -2.11
RIMBP3Q9UFD9 AC004022.1-201ENST00000447766 1066 ntBASIC1.87□□□□□ -2.11
RIMBP3Q9UFD9 SNRPGP6-201ENST00000451124 220 ntBASIC1.87□□□□□ -2.11
RIMBP3Q9UFD9 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.87□□□□□ -2.11
RIMBP3Q9UFD9 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RIMBP3Q9UFD9 MTCO1P47-201ENST00000523889 1271 ntBASIC1.87□□□□□ -2.11
RIMBP3Q9UFD9 AP005435.4-201ENST00000529514 284 ntBASIC1.87□□□□□ -2.11
RIMBP3Q9UFD9 OR8K4P-201ENST00000534608 872 ntBASIC1.87□□□□□ -2.11
RIMBP3Q9UFD9 MED28P6-201ENST00000558776 231 ntBASIC1.87□□□□□ -2.11
RIMBP3Q9UFD9 MTCO1P40-201ENST00000574371 625 ntBASIC1.87□□□□□ -2.11
RIMBP3Q9UFD9 FAM60BP-201ENST00000578364 658 ntBASIC1.87□□□□□ -2.11
RIMBP3Q9UFD9 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.87□□□□□ -2.11
RIMBP3Q9UFD9 AC073968.1-201ENST00000618594 637 ntBASIC1.87□□□□□ -2.11
RIMBP3Q9UFD9 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.86□□□□□ -2.11
RIMBP3Q9UFD9 RNU5D-1-201ENST00000363299 116 ntBASIC1.86□□□□□ -2.11
RIMBP3Q9UFD9 AL136372.1-201ENST00000403060 228 ntBASIC1.86□□□□□ -2.11
RIMBP3Q9UFD9 TATDN1P1-201ENST00000414123 891 ntBASIC1.86□□□□□ -2.11
RIMBP3Q9UFD9 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.86□□□□□ -2.11
RIMBP3Q9UFD9 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC1.86□□□□□ -2.11
RIMBP3Q9UFD9 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.86□□□□□ -2.11
RIMBP3Q9UFD9 NAP1L1P3-201ENST00000462291 880 ntBASIC1.86□□□□□ -2.11
RIMBP3Q9UFD9 AC015724.1-201ENST00000478577 156 ntBASIC1.86□□□□□ -2.11
RIMBP3Q9UFD9 CBX3P3-201ENST00000508108 532 ntBASIC1.86□□□□□ -2.11
RIMBP3Q9UFD9 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC1.86□□□□□ -2.11
RIMBP3Q9UFD9 HMGB3P3-201ENST00000510526 400 ntBASIC1.86□□□□□ -2.11
RIMBP3Q9UFD9 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.86□□□□□ -2.11
RIMBP3Q9UFD9 AC021851.1-201ENST00000608537 1082 ntBASIC1.86□□□□□ -2.11
RIMBP3Q9UFD9 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.86□□□□□ -2.11
RIMBP3Q9UFD9 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.86□□□□□ -2.11
RIMBP3Q9UFD9 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.86□□□□□ -2.11
RIMBP3Q9UFD9 MTND5P31-201ENST00000419366 1374 ntBASIC1.86□□□□□ -2.11
RIMBP3Q9UFD9 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms