Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 MTCO3P18-201ENST00000440206 761 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 AC006011.1-201ENST00000442758 349 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 HMGB3P8-201ENST00000449709 577 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 AC010099.1-201ENST00000455434 375 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 HMGN2P26-201ENST00000463169 339 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 FCF1P3-201ENST00000496394 590 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 AC074344.1-201ENST00000512823 224 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 AC026726.1-201ENST00000512859 601 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 SNORA31.9-201ENST00000516429 84 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 RNU6-572P-201ENST00000516724 80 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 AC134698.4-201ENST00000523451 826 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 H3F3AP1-201ENST00000559984 334 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 AC025627.2-201ENST00000576220 160 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 AC083809.1-201ENST00000615051 472 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 AL138880.2-201ENST00000616214 239 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 U6.42-201ENST00000618440 107 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 AC009033.1-201ENST00000624279 431 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 AC093536.2-201ENST00000565257 1406 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 Y_RNA.157-201ENST00000363638 102 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 Y_RNA.399-201ENST00000383955 105 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 RNA5SP252-201ENST00000391131 119 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 RNU4-26P-201ENST00000410270 107 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 RNU6-1077P-201ENST00000410506 102 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 AC007390.1-201ENST00000415722 356 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 ARL5AP1-201ENST00000418991 388 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 HSPE1P1-201ENST00000421494 318 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 HMGN2P30-201ENST00000423237 256 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 SKA2P1-201ENST00000425592 390 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 AC007560.1-201ENST00000426912 237 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 PRPS1P1-201ENST00000445305 876 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 AL590639.1-201ENST00000456484 337 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 DYNLL1P5-201ENST00000467158 270 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 RN7SL604P-201ENST00000492589 296 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 AC008716.1-201ENST00000511084 513 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 AC025465.4-201ENST00000513422 638 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 RNU1-103P-201ENST00000516502 125 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 SNORA31.19-201ENST00000517079 126 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 TRAV37-201ENST00000553906 342 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 OR11H5P-201ENST00000554039 926 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 PARP1P2-201ENST00000556806 195 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 AC136624.4-201ENST00000573044 370 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 MIR4474-201ENST00000579189 78 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 AC092747.3-201ENST00000603769 301 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 MTND4LP5-201ENST00000605152 292 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 BNIP3P10-201ENST00000605360 577 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 U2.17-201ENST00000611454 95 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 DUXAP9-208ENST00000622815 614 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 AC022418.1-201ENST00000624118 445 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 AC090617.10-201ENST00000624308 134 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 U2.21-201ENST00000637295 81 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 AC005183.1-201ENST00000603687 1979 ntBASIC3.31□□□□□ -1.88
LIN7CQ9NUP9 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 RNU6-778P-201ENST00000363269 103 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 Y_RNA.160-201ENST00000363677 92 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 RNU6-522P-201ENST00000364497 107 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 RNU6-1303P-201ENST00000364841 107 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 Y_RNA.373-201ENST00000365600 103 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 AC068538.1-201ENST00000376856 336 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 RNA5SP219-201ENST00000390940 113 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms