Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 AP002360.4-201ENST00000606980 481 ntBASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 AC011939.3-201ENST00000613686 466 ntBASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 U2.21-201ENST00000637295 81 ntBASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 ELF2P3-201ENST00000445099 1506 ntBASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 AC073346.2-201ENST00000624724 2058 ntBASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 FGF7P2-201ENST00000332473 296 ntBASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 RNU6-778P-201ENST00000363269 103 ntBASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 SNORA71.1-201ENST00000364523 117 ntBASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 SMIM11P1-201ENST00000369586 178 ntBASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 RNY3P10-201ENST00000384764 102 ntBASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 HMGN1P14-201ENST00000412459 517 ntBASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 BPY2DP-201ENST00000422208 265 ntBASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 AC009414.1-201ENST00000427200 443 ntBASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 RPS24P1-201ENST00000438550 371 ntBASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 MTND6P13-201ENST00000443510 523 ntBASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 AL136380.1-201ENST00000447970 162 ntBASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 AL033528.1-201ENST00000453780 140 ntBASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 RPL27AP5-201ENST00000469428 449 ntBASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 RPS15AP34-201ENST00000487776 387 ntBASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 RNU1-103P-201ENST00000516502 125 ntBASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 AC009812.2-201ENST00000517657 457 ntBASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 AL451064.1-201ENST00000607718 471 ntBASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 AC013562.2-201ENST00000611632 603 ntBASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 AC008147.4-201ENST00000617570 1204 ntBASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.31□□□□□ -1.88
BLOC1S4Q9NUP1 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 RNU4-1-201ENST00000363925 141 ntBASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 RNU6-190P-201ENST00000384154 102 ntBASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 RPS3AP3-201ENST00000411933 242 ntBASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 NPM1P11-201ENST00000417106 855 ntBASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 AL591212.2-201ENST00000433923 257 ntBASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 PGBD4P3-201ENST00000440731 581 ntBASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 WASF1P1-201ENST00000447560 1131 ntBASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 SNRPGP9-201ENST00000456025 225 ntBASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 snoU13.22-201ENST00000459428 104 ntBASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 RPL31P41-201ENST00000477967 372 ntBASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 AC126182.1-201ENST00000478134 357 ntBASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 RPS27AP10-201ENST00000496103 208 ntBASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 MIR548AB-201ENST00000584917 84 ntBASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 NRBF2P1-201ENST00000587407 859 ntBASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 AL590229.1-201ENST00000603497 542 ntBASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 AC015871.2-201ENST00000603605 948 ntBASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 Z94722.1-201ENST00000604328 474 ntBASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 AC008250.2-201ENST00000615261 205 ntBASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 ATP5A1P2-202ENST00000616464 443 ntBASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
BLOC1S4Q9NUP1 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
BLOC1S4Q9NUP1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
BLOC1S4Q9NUP1 RNU5E-1-201ENST00000362477 120 ntBASIC3.29□□□□□ -1.88
BLOC1S4Q9NUP1 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.29□□□□□ -1.88
BLOC1S4Q9NUP1 RNU6-946P-201ENST00000383878 107 ntBASIC3.29□□□□□ -1.88
BLOC1S4Q9NUP1 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.29□□□□□ -1.88
BLOC1S4Q9NUP1 AC080125.1-201ENST00000414888 684 ntBASIC3.29□□□□□ -1.88
BLOC1S4Q9NUP1 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.29□□□□□ -1.88
BLOC1S4Q9NUP1 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.29□□□□□ -1.88
BLOC1S4Q9NUP1 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.29□□□□□ -1.88
BLOC1S4Q9NUP1 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.29□□□□□ -1.88
BLOC1S4Q9NUP1 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.29□□□□□ -1.88
BLOC1S4Q9NUP1 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.29□□□□□ -1.88
BLOC1S4Q9NUP1 AC093899.1-201ENST00000457984 376 ntBASIC3.29□□□□□ -1.88
BLOC1S4Q9NUP1 AC007182.2-201ENST00000489251 402 ntBASIC3.29□□□□□ -1.88
BLOC1S4Q9NUP1 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.29□□□□□ -1.88
BLOC1S4Q9NUP1 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.29□□□□□ -1.88
BLOC1S4Q9NUP1 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.29□□□□□ -1.88
BLOC1S4Q9NUP1 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
BLOC1S4Q9NUP1 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.29□□□□□ -1.88
BLOC1S4Q9NUP1 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.29□□□□□ -1.88
BLOC1S4Q9NUP1 AP001506.1-201ENST00000615444 211 ntBASIC3.29□□□□□ -1.88
BLOC1S4Q9NUP1 AL603839.4-201ENST00000624658 1005 ntBASIC3.29□□□□□ -1.88
BLOC1S4Q9NUP1 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.29□□□□□ -1.88
BLOC1S4Q9NUP1 MIR3199-2-201ENST00000636243 86 ntBASIC3.29□□□□□ -1.88
BLOC1S4Q9NUP1 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
BLOC1S4Q9NUP1 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms