Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.96□□□□□ -1.77
CCM2LQ9NUG4 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 RNU6-371P-201ENST00000364283 108 ntBASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 U3.42-201ENST00000408746 214 ntBASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 YPEL5P1-201ENST00000419731 367 ntBASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 RPL21P109-201ENST00000422213 475 ntBASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 AC073063.1-201ENST00000434352 607 ntBASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 AL360271.2-201ENST00000447710 161 ntBASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 UQCRHP4-201ENST00000471686 272 ntBASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 HMGB1P30-201ENST00000492455 606 ntBASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 RN7SL810P-201ENST00000493031 276 ntBASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 AL592156.1-201ENST00000508758 304 ntBASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 Y_RNA.675-201ENST00000516389 149 ntBASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 SNORA67.7-201ENST00000516664 135 ntBASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 RNA5SP309-201ENST00000516670 106 ntBASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 AC104662.1-201ENST00000604448 511 ntBASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 AC104237.2-201ENST00000612456 443 ntBASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 AC022140.2-201ENST00000623500 188 ntBASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 MIR1302-1-201ENST00000637932 143 ntBASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCM2LQ9NUG4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 LARP1BP1-201ENST00000506036 1359 ntBASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 RNU6-694P-201ENST00000364071 147 ntBASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 RNU1-13P-201ENST00000384499 162 ntBASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 MIR578-201ENST00000384828 96 ntBASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 MIR554-201ENST00000384874 96 ntBASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 SNORA11F-201ENST00000408237 128 ntBASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 RN7SKP202-201ENST00000410439 330 ntBASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 RPL23AP26-201ENST00000412728 464 ntBASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 AL158156.1-201ENST00000422509 473 ntBASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 RPL23AP69-201ENST00000431134 458 ntBASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 HMGN2P16-201ENST00000456802 261 ntBASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 AMD1P1-201ENST00000457220 922 ntBASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 RPS23P3-201ENST00000470993 430 ntBASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 AC009901.1-201ENST00000506703 541 ntBASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 RNA5SP143-201ENST00000516936 115 ntBASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 MIR3158-1-201ENST00000583596 81 ntBASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 AC073539.2-201ENST00000597113 165 ntBASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 AL591034.3-201ENST00000605511 685 ntBASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 DUSP12P1-201ENST00000612874 516 ntBASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 AL110115.1-201ENST00000614396 364 ntBASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 AL773545.4-201ENST00000637262 310 ntBASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 AL513478.4-201ENST00000641636 310 ntBASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 AL049641.1-201ENST00000441055 1948 ntBASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CCM2LQ9NUG4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms