Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC090255.1-201ENST00000495779 349 ntBASIC2.08□□□□□ -2.08
TREX1Q9NSU2 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.08□□□□□ -2.08
TREX1Q9NSU2 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
TREX1Q9NSU2 AC118465.1-201ENST00000513820 1271 ntBASIC2.08□□□□□ -2.08
TREX1Q9NSU2 SCARNA17.1-201ENST00000516211 143 ntBASIC2.08□□□□□ -2.08
TREX1Q9NSU2 RNU6-390P-201ENST00000516259 103 ntBASIC2.08□□□□□ -2.08
TREX1Q9NSU2 SCARNA17.2-201ENST00000516334 143 ntBASIC2.08□□□□□ -2.08
TREX1Q9NSU2 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.08□□□□□ -2.08
TREX1Q9NSU2 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.08□□□□□ -2.08
TREX1Q9NSU2 MIR4435-1-201ENST00000582552 80 ntBASIC2.08□□□□□ -2.08
TREX1Q9NSU2 BNIP3P31-201ENST00000604515 566 ntBASIC2.08□□□□□ -2.08
TREX1Q9NSU2 AC006270.3-201ENST00000605967 1036 ntBASIC2.08□□□□□ -2.08
TREX1Q9NSU2 SCARNA17.4-201ENST00000614296 143 ntBASIC2.08□□□□□ -2.08
TREX1Q9NSU2 SDR42E1P2-201ENST00000614861 481 ntBASIC2.08□□□□□ -2.08
TREX1Q9NSU2 AL356266.1-201ENST00000623311 483 ntBASIC2.08□□□□□ -2.08
TREX1Q9NSU2 AC116618.1-201ENST00000634617 774 ntBASIC2.08□□□□□ -2.08
TREX1Q9NSU2 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.08□□□□□ -2.08
TREX1Q9NSU2 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
TREX1Q9NSU2 AP000553.5-201ENST00000641933 54 ntBASIC2.08□□□□□ -2.08
TREX1Q9NSU2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
TREX1Q9NSU2 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.08□□□□□ -2.08
TREX1Q9NSU2 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TREX1Q9NSU2 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
TREX1Q9NSU2 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.08□□□□□ -2.08
TREX1Q9NSU2 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.08□□□□□ -2.08
TREX1Q9NSU2 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TREX1Q9NSU2 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
TREX1Q9NSU2 Y_RNA.311-201ENST00000365068 96 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TREX1Q9NSU2 AL023284.1-201ENST00000403956 276 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 RNA5SP338-201ENST00000410495 85 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 AL139156.1-201ENST00000412785 841 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.07□□□□□ -2.08
TREX1Q9NSU2 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.07□□□□□ -2.08
TREX1Q9NSU2 BTF3L4P3-201ENST00000418879 476 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.07□□□□□ -2.08
TREX1Q9NSU2 MYL8P-204ENST00000431574 518 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.07□□□□□ -2.08
TREX1Q9NSU2 RPS15AP5-201ENST00000436276 388 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TREX1Q9NSU2 SNRPEP7-201ENST00000438350 220 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 USP9YP8-201ENST00000441913 500 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 AC007327.1-201ENST00000447461 264 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 PAXBP1P1-201ENST00000449315 447 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 RN7SL429P-201ENST00000479090 223 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 RN7SL489P-201ENST00000486185 223 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 RPS27P21-201ENST00000486977 252 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 RN7SL327P-201ENST00000488659 223 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 RPS15AP36-201ENST00000492022 382 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 AC104090.1-201ENST00000506341 1171 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 AC096571.1-202ENST00000506634 735 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 AC024589.1-201ENST00000512207 263 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 RNU5F-8P-201ENST00000515941 111 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TREX1Q9NSU2 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
TREX1Q9NSU2 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.07□□□□□ -2.08
TREX1Q9NSU2 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.07□□□□□ -2.08
TREX1Q9NSU2 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.07□□□□□ -2.08
TREX1Q9NSU2 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.07□□□□□ -2.08
TREX1Q9NSU2 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.07□□□□□ -2.08
TREX1Q9NSU2 AC136601.2-201ENST00000604356 474 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 AL450336.1-201ENST00000605180 586 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 AL161423.1-201ENST00000613700 262 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 TUG1_2.1-201ENST00000614234 87 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 AC009090.3-201ENST00000616553 565 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 RN7SL853P-201ENST00000617250 223 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 AC010378.1-201ENST00000619270 362 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 AC068057.2-201ENST00000624047 895 ntBASIC2.07□□□□□ -2.08
TREX1Q9NSU2 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
TREX1Q9NSU2 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.07□□□□□ -2.08
TREX1Q9NSU2 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
TREX1Q9NSU2 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
TREX1Q9NSU2 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
TREX1Q9NSU2 RNU6-301P-201ENST00000384277 107 ntBASIC2.06□□□□□ -2.08
TREX1Q9NSU2 RN7SKP284-201ENST00000411002 343 ntBASIC2.06□□□□□ -2.08
TREX1Q9NSU2 USP9YP33-201ENST00000412220 421 ntBASIC2.06□□□□□ -2.08
TREX1Q9NSU2 MTND1P21-201ENST00000412991 285 ntBASIC2.06□□□□□ -2.08
TREX1Q9NSU2 AL451054.2-201ENST00000420896 202 ntBASIC2.06□□□□□ -2.08
TREX1Q9NSU2 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.06□□□□□ -2.08
TREX1Q9NSU2 NANOGP2-201ENST00000435391 727 ntBASIC2.06□□□□□ -2.08
TREX1Q9NSU2 USP9YP35-201ENST00000435696 412 ntBASIC2.06□□□□□ -2.08
TREX1Q9NSU2 RPL35AP22-201ENST00000436855 335 ntBASIC2.06□□□□□ -2.08
TREX1Q9NSU2 COX7BP2-201ENST00000437976 242 ntBASIC2.06□□□□□ -2.08
TREX1Q9NSU2 GPM6BP3-201ENST00000442797 145 ntBASIC2.06□□□□□ -2.08
TREX1Q9NSU2 RPL7P36-201ENST00000444633 681 ntBASIC2.06□□□□□ -2.08
TREX1Q9NSU2 ZNF886P-201ENST00000450781 723 ntBASIC2.06□□□□□ -2.08
TREX1Q9NSU2 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.06□□□□□ -2.08
TREX1Q9NSU2 AC108729.1-201ENST00000487812 947 ntBASIC2.06□□□□□ -2.08
TREX1Q9NSU2 AC079804.2-201ENST00000490376 200 ntBASIC2.06□□□□□ -2.08
TREX1Q9NSU2 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.06□□□□□ -2.08
TREX1Q9NSU2 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.06□□□□□ -2.08
TREX1Q9NSU2 IGKV3-31-201ENST00000523109 329 ntBASIC2.06□□□□□ -2.08
TREX1Q9NSU2 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.06□□□□□ -2.08
TREX1Q9NSU2 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.06□□□□□ -2.08
TREX1Q9NSU2 MIR1273D-201ENST00000577266 86 ntBASIC2.06□□□□□ -2.08
TREX1Q9NSU2 SNORD53-201ENST00000579969 78 ntBASIC2.06□□□□□ -2.08
TREX1Q9NSU2 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.06□□□□□ -2.08
TREX1Q9NSU2 MIR6873-201ENST00000622788 63 ntBASIC2.06□□□□□ -2.08
TREX1Q9NSU2 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms