Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 MIR892C-201ENST00000516410 77 ntBASIC4.55□□□□□ -1.68
SSU72Q9NP77 SCARNA21.2-201ENST00000516600 166 ntBASIC4.55□□□□□ -1.68
SSU72Q9NP77 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.55□□□□□ -1.68
SSU72Q9NP77 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.55□□□□□ -1.68
SSU72Q9NP77 RRN3P3-201ENST00000549207 578 ntBASIC4.55□□□□□ -1.68
SSU72Q9NP77 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.55□□□□□ -1.68
SSU72Q9NP77 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.55□□□□□ -1.68
SSU72Q9NP77 BPIFA4P-203ENST00000603168 689 ntBASIC4.55□□□□□ -1.68
SSU72Q9NP77 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.55□□□□□ -1.68
SSU72Q9NP77 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSU72Q9NP77 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSU72Q9NP77 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SSU72Q9NP77 SAMMSON-213ENST00000641336 1521 ntBASIC4.55□□□□□ -1.68
SSU72Q9NP77 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.55□□□□□ -1.68
SSU72Q9NP77 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
SSU72Q9NP77 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSU72Q9NP77 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
SSU72Q9NP77 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SSU72Q9NP77 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SSU72Q9NP77 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SSU72Q9NP77 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
SSU72Q9NP77 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SSU72Q9NP77 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
SSU72Q9NP77 ZNF299P-201ENST00000406845 1804 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.54□□□□□ -1.68
SSU72Q9NP77 AC011266.1-201ENST00000624119 3569 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 AC007685.1-201ENST00000329806 452 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 RNU5A-1-201ENST00000362698 116 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 Y_RNA.183-201ENST00000363882 113 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 RNU6-338P-201ENST00000383888 105 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 Y_RNA.416-201ENST00000384014 113 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 MIR1286-201ENST00000408112 78 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 Y_RNA.592-201ENST00000410274 109 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 RN7SKP267-201ENST00000410381 285 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 AL513331.1-201ENST00000411908 397 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SSU72Q9NP77 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.54□□□□□ -1.68
SSU72Q9NP77 AC079780.1-201ENST00000428259 207 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 AC092423.1-201ENST00000430165 186 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 RPS29P14-201ENST00000431518 171 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 AL159987.2-201ENST00000432754 307 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 AL121871.1-201ENST00000443413 436 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.54□□□□□ -1.68
SSU72Q9NP77 NDUFB1P2-201ENST00000449477 176 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.54□□□□□ -1.68
SSU72Q9NP77 RPL36AP41-201ENST00000493820 306 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 AC072052.1-201ENST00000496556 306 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 PARP4P3-201ENST00000510265 317 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 AC004980.4-201ENST00000513375 203 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 IGKV2-18-201ENST00000522607 343 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.54□□□□□ -1.68
SSU72Q9NP77 AL157871.3-201ENST00000557231 293 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.54□□□□□ -1.68
SSU72Q9NP77 AC006557.5-201ENST00000603126 811 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 AC098826.3-201ENST00000603823 466 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 AC009779.6-201ENST00000603972 165 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 AL360181.4-201ENST00000621752 134 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.54□□□□□ -1.68
SSU72Q9NP77 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SSU72Q9NP77 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSU72Q9NP77 AC087190.4-201ENST00000574616 8334 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 RLIMP1-201ENST00000339626 1680 ntBASIC4.54□□□□□ -1.68
SSU72Q9NP77 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.54□□□□□ -1.68
SSU72Q9NP77 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSU72Q9NP77 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSU72Q9NP77 AC026951.1-201ENST00000559530 2459 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSU72Q9NP77 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSU72Q9NP77 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
SSU72Q9NP77 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.53□□□□□ -1.68
SSU72Q9NP77 RNU6-37P-201ENST00000362692 107 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 Y_RNA.84-201ENST00000363011 104 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 RNU6-11P-201ENST00000364234 107 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 RNU6-7-201ENST00000364784 107 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 RNU6-8-201ENST00000365467 107 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 RNU6-25P-201ENST00000383873 107 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 RNU6-1-201ENST00000383898 107 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 RNU6-48P-201ENST00000384161 107 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 RNU6-36P-201ENST00000384172 107 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 RNU6-4P-201ENST00000384205 107 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 RNU6-5P-201ENST00000384238 107 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 Y_RNA.462-201ENST00000384268 102 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 RNU6-3P-201ENST00000384314 107 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 RNU6-16P-201ENST00000384385 107 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 RNU6-15P-201ENST00000384534 107 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 RNU6-2-201ENST00000384627 107 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 RNU6-29P-201ENST00000384637 107 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 RNU6-9-201ENST00000384776 107 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 RNU6-33P-201ENST00000384793 107 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 MIR215-201ENST00000384858 110 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 SNORA69.1-201ENST00000390904 137 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 Z98745.1-201ENST00000402553 494 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 RNU6-1203P-201ENST00000410703 110 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 RNU2-25P-201ENST00000411041 191 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 MTCO3P19-201ENST00000415864 321 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 EI24P1-201ENST00000416584 867 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.53□□□□□ -1.68
SSU72Q9NP77 MYL8P-204ENST00000431574 518 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms